RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
TPM1-230ENST00000561266 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
TPM1-230ENST00000561266 SEMA3EO15041 775 aa17.12■□□□□ 0.33
TPM1-230ENST00000561266 MMP14P50281 582 aa17.12■□□□□ 0.33
TPM1-230ENST00000561266 DIXDC1Q155Q3 683 aa17.12■□□□□ 0.33
TPM1-230ENST00000561266 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
TPM1-230ENST00000561266 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
TPM1-230ENST00000561266 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
TPM1-230ENST00000561266 SNRKQ9NRH2 765 aa17.12■□□□□ 0.33
TPM1-230ENST00000561266 MKRN1Q9UHC7 482 aaKnown RBP17.12■□□□□ 0.33
TPM1-230ENST00000561266 PITPNM2Q9BZ72 1349 aa17.12■□□□□ 0.33
TPM1-230ENST00000561266 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
TPM1-230ENST00000561266 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
TPM1-230ENST00000561266 HMMRO75330 724 aa17.11■□□□□ 0.33
TPM1-230ENST00000561266 RBM5P52756 815 aaKnown RBP eCLIP17.11■□□□□ 0.33
TPM1-230ENST00000561266 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
TPM1-230ENST00000561266 SULF1Q8IWU6 871 aa17.11■□□□□ 0.33
TPM1-230ENST00000561266 SERPINA10Q9UK55 444 aa17.11■□□□□ 0.33
TPM1-230ENST00000561266 APOBEC3HQ6NTF7 200 aaKnown RBP17.1■□□□□ 0.33
TPM1-230ENST00000561266 AACSQ86V21 672 aa17.1■□□□□ 0.33
TPM1-230ENST00000561266 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
TPM1-230ENST00000561266 EXOC6Q8TAG9 804 aa17.1■□□□□ 0.33
TPM1-230ENST00000561266 KLRG1Q96E93 195 aa17.1■□□□□ 0.33
TPM1-230ENST00000561266 BCL11AQ9H165 835 aa17.1■□□□□ 0.33
TPM1-230ENST00000561266 ZNF70Q9UC06 446 aaPredicted RBP17.1■□□□□ 0.33
TPM1-230ENST00000561266 NDUFB9Q9Y6M9 179 aa17.1■□□□□ 0.33
TPM1-230ENST00000561266 PDS5AQ29RF7 1337 aaKnown RBP17.1■□□□□ 0.33
TPM1-230ENST00000561266 CACNB3P54284 484 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 MOB2Q70IA6 237 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 ERC1Q8IUD2 1116 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 CDAN1Q8IWY9 1227 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 DCTPP1Q9H773 170 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 SUGT1Q9Y2Z0 365 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 TLL2Q9Y6L7 1015 aa17.09■□□□□ 0.33
TPM1-230ENST00000561266 PCNTO95613 3336 aa17.08■□□□□ 0.33
TPM1-230ENST00000561266 CNTNAP1P78357 1384 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 LDHBP07195 334 aaKnown RBP17.08■□□□□ 0.32
TPM1-230ENST00000561266 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.32
TPM1-230ENST00000561266 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 TEKT1Q969V4 418 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 ZDHHC15Q96MV8 337 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 MRIQ9BWK5 157 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 ABCF2Q9UG63 623 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 ABT1Q9ULW3 272 aaKnown RBP17.08■□□□□ 0.32
TPM1-230ENST00000561266 FZD1Q9UP38 647 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 DAGLAQ9Y4D2 1042 aa17.08■□□□□ 0.32
TPM1-230ENST00000561266 SSC5DA1L4H1 1573 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 RASSF10A6NK89 507 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 CYP2E1P05181 493 aaPredicted RBP17.07■□□□□ 0.32
TPM1-230ENST00000561266 UQCRFS1P1P0C7P4 283 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 ZAP70P43403 619 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 VEGFBP49765 207 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
TPM1-230ENST00000561266 HHIPL2Q6UWX4 724 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 DEFB129Q9H1M3 183 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 VEZTQ9HBM0 779 aa17.07■□□□□ 0.32
TPM1-230ENST00000561266 PIH1D3Q9NQM4 214 aaKnown RBP17.07■□□□□ 0.32
TPM1-230ENST00000561266 TCP10L2B9ZVM9 353 aa17.06■□□□□ 0.32
TPM1-230ENST00000561266 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
TPM1-230ENST00000561266 APOBEC3FQ8IUX4 373 aaKnown RBP17.06■□□□□ 0.32
TPM1-230ENST00000561266 ZNF512BQ96KM6 892 aaPredicted RBP17.06■□□□□ 0.32
TPM1-230ENST00000561266 GBA2Q9HCG7 927 aaPredicted RBP17.06■□□□□ 0.32
TPM1-230ENST00000561266 MECOMQ03112 1051 aa17.05■□□□□ 0.32
TPM1-230ENST00000561266 RASA3Q14644 834 aa17.05■□□□□ 0.32
TPM1-230ENST00000561266 DEFB115Q30KQ5 88 aa17.05■□□□□ 0.32
TPM1-230ENST00000561266 NBPF12Q5TAG4 269 aaPredicted RBP17.05■□□□□ 0.32
TPM1-230ENST00000561266 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
TPM1-230ENST00000561266 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
TPM1-230ENST00000561266 ANTXR1Q9H6X2 564 aa17.05■□□□□ 0.32
TPM1-230ENST00000561266 DOCK2Q92608 1830 aa17.05■□□□□ 0.32
TPM1-230ENST00000561266 GAKO14976 1311 aa17.04■□□□□ 0.32
TPM1-230ENST00000561266 MAST3O60307 1309 aa17.04■□□□□ 0.32
TPM1-230ENST00000561266 CLASRPQ8N2M8 674 aaKnown RBP17.04■□□□□ 0.32
TPM1-230ENST00000561266 NSUN4Q96CB9 384 aaKnown RBP17.04■□□□□ 0.32
TPM1-230ENST00000561266 TEPSINQ96N21 525 aa17.04■□□□□ 0.32
TPM1-230ENST00000561266 PAPPA2Q9BXP8 1791 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 MYO1BO43795 1136 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 NFIAQ12857 509 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 PRKG1Q13976 671 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 ERICH6Q7L0X2 663 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 JMYQ8N9B5 988 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 EDC3Q96F86 508 aaKnown RBP17.03■□□□□ 0.32
TPM1-230ENST00000561266 ZIC5Q96T25 663 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 LRRCC1Q9C099 1032 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 TMEM39BQ9GZU3 492 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
TPM1-230ENST00000561266 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.32
TPM1-230ENST00000561266 UBE2Q2LH0YL09 131 aa17.02■□□□□ 0.32
TPM1-230ENST00000561266 HUNKP57058 714 aa17.02■□□□□ 0.32
TPM1-230ENST00000561266 ADGRA1Q86SQ6 560 aa17.02■□□□□ 0.32
TPM1-230ENST00000561266 ZFPM1Q8IX07 1006 aa17.02■□□□□ 0.32
TPM1-230ENST00000561266 ZGPATQ8N5A5 531 aaKnown RBP17.02■□□□□ 0.32
TPM1-230ENST00000561266 FAM163AQ96GL9 167 aaPredicted RBP17.02■□□□□ 0.32
TPM1-230ENST00000561266 AOC2O75106 756 aa17.01■□□□□ 0.31
TPM1-230ENST00000561266 IGHDP01880 384 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms