RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 CYP2E1P05181 493 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-220ENST00000561253 SOX18P35713 384 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 HSPA2P54652 639 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 PCBP4P57723 403 aaKnown RBP8.69□□□□□ -1.02
LRRC28-220ENST00000561253 XPCQ01831 940 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-220ENST00000561253 TBC1D8BQ0IIM8 1120 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
LRRC28-220ENST00000561253 CCDC74AQ96AQ1 378 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 SETDB2Q96T68 719 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 UBE2OQ9C0C9 1292 aaKnown RBP8.69□□□□□ -1.02
LRRC28-220ENST00000561253 AVENQ9NQS1 362 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-220ENST00000561253 KANSL3Q9P2N6 904 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 ERBB4Q15303 1308 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 ZFYVE9O95405 1425 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 ADGRB3O60242 1522 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 SLIT1O75093 1534 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 TMEM131LA2VDJ0 1609 aa8.69□□□□□ -1.02
LRRC28-220ENST00000561253 UBR1Q8IWV7 1749 aa8.68□□□□□ -1.02
LRRC28-220ENST00000561253 SIN3BO75182 1162 aa8.68□□□□□ -1.02
LRRC28-220ENST00000561253 POLR3DP05423 398 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-220ENST00000561253 ARAFP10398 606 aa8.68□□□□□ -1.02
LRRC28-220ENST00000561253 HYAL2Q12891 473 aa8.68□□□□□ -1.02
LRRC28-220ENST00000561253 DUSP9Q99956 384 aaKnown RBP8.68□□□□□ -1.02
LRRC28-220ENST00000561253 NLRP2Q9NX02 1062 aa8.68□□□□□ -1.02
LRRC28-220ENST00000561253 TMEM2Q9UHN6 1383 aa8.68□□□□□ -1.02
LRRC28-220ENST00000561253 ADH6P28332 368 aa8.67□□□□□ -1.02
LRRC28-220ENST00000561253 NRLP54845 237 aa8.67□□□□□ -1.02
LRRC28-220ENST00000561253 PCSK7Q16549 785 aa8.67□□□□□ -1.02
LRRC28-220ENST00000561253 NCAPG2Q86XI2 1143 aa8.67□□□□□ -1.02
LRRC28-220ENST00000561253 GALNT12Q8IXK2 581 aa8.67□□□□□ -1.02
LRRC28-220ENST00000561253 NEURL4Q96JN8 1562 aa8.67□□□□□ -1.02
LRRC28-220ENST00000561253 NSUN5Q96P11 429 aaKnown RBP8.67□□□□□ -1.02
LRRC28-220ENST00000561253 PARP2Q9UGN5 583 aa8.67□□□□□ -1.02
LRRC28-220ENST00000561253 MED14O60244 1454 aa8.66□□□□□ -1.02
LRRC28-220ENST00000561253 EDN3P14138 238 aa8.66□□□□□ -1.02
LRRC28-220ENST00000561253 LTKP29376 864 aa8.66□□□□□ -1.02
LRRC28-220ENST00000561253 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
LRRC28-220ENST00000561253 SPACA7Q96KW9 195 aa8.66□□□□□ -1.02
LRRC28-220ENST00000561253 NPHS2Q9NP85 383 aa8.66□□□□□ -1.02
LRRC28-220ENST00000561253 DNAJB12Q9NXW2 375 aaKnown RBP8.66□□□□□ -1.02
LRRC28-220ENST00000561253 STRCQ7RTU9 1775 aa8.66□□□□□ -1.02
LRRC28-220ENST00000561253 CCDC144AA2RUR9 1427 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 E9PSI1 815 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 HOXD8P13378 290 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-220ENST00000561253 GPLD1P80108 840 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 MLLT1Q03111 559 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-220ENST00000561253 SRSF11Q05519 484 aaKnown RBP8.65□□□□□ -1.02
LRRC28-220ENST00000561253 PSMD2Q13200 908 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.65□□□□□ -1.02
LRRC28-220ENST00000561253 THEMISQ8N1K5 641 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-220ENST00000561253 TRPM4Q8TD43 1214 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 EPS8L3Q8TE67 593 aaKnown RBP8.65□□□□□ -1.02
LRRC28-220ENST00000561253 MRRFQ96E11 262 aaKnown RBP8.65□□□□□ -1.02
LRRC28-220ENST00000561253 CNTNAP3BQ96NU0 1288 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 CNTNAP3Q9BZ76 1288 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 MRS2Q9HD23 443 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 SALL4Q9UJQ4 1053 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 SPG7Q9UQ90 795 aa8.65□□□□□ -1.02
LRRC28-220ENST00000561253 UNCXA6NJT0 531 aa8.64□□□□□ -1.03
LRRC28-220ENST00000561253 GADD45BO75293 160 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-220ENST00000561253 IRS1P35568 1242 aa8.64□□□□□ -1.03
LRRC28-220ENST00000561253 COL13A1Q5TAT6 717 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-220ENST00000561253 HFE2Q6ZVN8 426 aa8.64□□□□□ -1.03
LRRC28-220ENST00000561253 TNFRSF25Q93038 417 aa8.64□□□□□ -1.03
LRRC28-220ENST00000561253 FRMD6Q96NE9 622 aa8.64□□□□□ -1.03
LRRC28-220ENST00000561253 OXCT2Q9BYC2 517 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-220ENST00000561253 KLF15Q9UIH9 416 aa8.64□□□□□ -1.03
LRRC28-220ENST00000561253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-220ENST00000561253 NEXMIFQ5QGS0 1516 aa8.64□□□□□ -1.03
LRRC28-220ENST00000561253 LOC102724428A0A0B4J2F2 783 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 ZBTB42B2RXF5 422 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 KIF4AO95239 1232 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 GHRHP01286 108 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 GNA15P30679 374 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 SIK1P57059 783 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 PI16Q6UXB8 463 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 GOLGA6L1Q8N7Z2 621 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 FAM161BQ96MY7 647 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 RBSNQ9H1K0 784 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 RNF19AQ9NV58 838 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 GDF2Q9UK05 429 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-220ENST00000561253 SCAF11Q99590 1463 aaKnown RBP8.63□□□□□ -1.03
LRRC28-220ENST00000561253 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
LRRC28-220ENST00000561253 MYO5BQ9ULV0 1848 aa8.62□□□□□ -1.03
LRRC28-220ENST00000561253 J3QW42 95 aa8.62□□□□□ -1.03
LRRC28-220ENST00000561253 EIF2AK2P19525 551 aaKnown RBP8.62□□□□□ -1.03
LRRC28-220ENST00000561253 ADH7P40394 386 aa8.62□□□□□ -1.03
LRRC28-220ENST00000561253 DAB2P98082 770 aa8.62□□□□□ -1.03
LRRC28-220ENST00000561253 TMC4Q7Z404 712 aa8.62□□□□□ -1.03
LRRC28-220ENST00000561253 FAM35AQ86V20 835 aa8.62□□□□□ -1.03
LRRC28-220ENST00000561253 LATS2Q9NRM7 1088 aa8.62□□□□□ -1.03
LRRC28-220ENST00000561253 ADARB2-AS1A8MUL3 147 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 SORBS3O60504 671 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 WFS1O76024 890 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 ADAMTS2O95450 1211 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 CPB1P15086 417 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 ALAS2P22557 587 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 KRT76Q01546 638 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms