RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
SHF-210ENST00000561239 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
SHF-210ENST00000561239 PPP2R3BQ9Y5P8 575 aa16.69■□□□□ 0.26
SHF-210ENST00000561239 COL1A1P02452 1464 aaPredicted RBP16.68■□□□□ 0.26
SHF-210ENST00000561239 POLR2AP24928 1970 aaKnown RBP16.68■□□□□ 0.26
SHF-210ENST00000561239 ADORA1P30542 326 aa16.68■□□□□ 0.26
SHF-210ENST00000561239 TNNI3KQ59H18 835 aa16.68■□□□□ 0.26
SHF-210ENST00000561239 CYP4F22Q6NT55 531 aa16.68■□□□□ 0.26
SHF-210ENST00000561239 ERC1Q8IUD2 1116 aa16.68■□□□□ 0.26
SHF-210ENST00000561239 CCDC102AQ96A19 550 aa16.68■□□□□ 0.26
SHF-210ENST00000561239 MRIQ9BWK5 157 aa16.68■□□□□ 0.26
SHF-210ENST00000561239 DENND2AQ9ULE3 1009 aa16.68■□□□□ 0.26
SHF-210ENST00000561239 FPGT-TNNI3KV9GXZ4 949 aa16.68■□□□□ 0.26
SHF-210ENST00000561239 GRM1Q13255 1194 aa16.67■□□□□ 0.26
SHF-210ENST00000561239 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
SHF-210ENST00000561239 ZGPATQ8N5A5 531 aaKnown RBP16.67■□□□□ 0.26
SHF-210ENST00000561239 EXOC6Q8TAG9 804 aa16.67■□□□□ 0.26
SHF-210ENST00000561239 XAGE2Q96GT9 111 aa16.67■□□□□ 0.26
SHF-210ENST00000561239 PRMT6Q96LA8 375 aaPredicted RBP16.67■□□□□ 0.26
SHF-210ENST00000561239 BEGAINQ9BUH8 593 aa16.67■□□□□ 0.26
SHF-210ENST00000561239 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
SHF-210ENST00000561239 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 PHKA1P46020 1223 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 CRKP46108 304 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 OS9Q13438 667 aaPredicted RBP16.66■□□□□ 0.26
SHF-210ENST00000561239 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 RGMBQ6NW40 437 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 DLK2Q6UY11 383 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 RHPN1Q8TCX5 695 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
SHF-210ENST00000561239 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
SHF-210ENST00000561239 NOGQ13253 232 aa16.65■□□□□ 0.26
SHF-210ENST00000561239 GORABQ5T7V8 394 aa16.65■□□□□ 0.26
SHF-210ENST00000561239 KIF1BPQ96EK5 621 aa16.65■□□□□ 0.26
SHF-210ENST00000561239 NEUROD6Q96NK8 337 aa16.65■□□□□ 0.26
SHF-210ENST00000561239 PCNTO95613 3336 aa16.65■□□□□ 0.26
SHF-210ENST00000561239 PDS5AQ29RF7 1337 aaKnown RBP16.65■□□□□ 0.26
SHF-210ENST00000561239 TNNI2P48788 182 aa16.64■□□□□ 0.25
SHF-210ENST00000561239 ZNF157P51786 506 aaPredicted RBP16.64■□□□□ 0.25
SHF-210ENST00000561239 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
SHF-210ENST00000561239 TTLL12Q14166 644 aaPredicted RBP16.64■□□□□ 0.25
SHF-210ENST00000561239 SUPT20HL1Q3ZLR7 823 aa16.64■□□□□ 0.25
SHF-210ENST00000561239 ARMC9Q7Z3E5 817 aa16.64■□□□□ 0.25
SHF-210ENST00000561239 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
SHF-210ENST00000561239 WBP1LQ9NX94 342 aa16.64■□□□□ 0.25
SHF-210ENST00000561239 DBNLQ9UJU6 430 aaKnown RBP16.64■□□□□ 0.25
SHF-210ENST00000561239 CLRN2A0PK11 232 aa16.63■□□□□ 0.25
SHF-210ENST00000561239 ARID4AP29374 1257 aaPredicted RBP16.63■□□□□ 0.25
SHF-210ENST00000561239 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
SHF-210ENST00000561239 HHIPL2Q6UWX4 724 aa16.63■□□□□ 0.25
SHF-210ENST00000561239 ZNF512BQ96KM6 892 aaPredicted RBP16.63■□□□□ 0.25
SHF-210ENST00000561239 ZDHHC15Q96MV8 337 aa16.63■□□□□ 0.25
SHF-210ENST00000561239 DBNDD2Q9BQY9 259 aa16.63■□□□□ 0.25
SHF-210ENST00000561239 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
SHF-210ENST00000561239 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
SHF-210ENST00000561239 PAPPA2Q9BXP8 1791 aa16.63■□□□□ 0.25
SHF-210ENST00000561239 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
SHF-210ENST00000561239 PPP1R12BO60237 982 aaPredicted RBP16.62■□□□□ 0.25
SHF-210ENST00000561239 LDHBP07195 334 aaKnown RBP16.62■□□□□ 0.25
SHF-210ENST00000561239 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
SHF-210ENST00000561239 RASGRF1Q13972 1273 aa16.62■□□□□ 0.25
SHF-210ENST00000561239 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
SHF-210ENST00000561239 SPTY2D1Q68D10 685 aaPredicted RBP16.62■□□□□ 0.25
SHF-210ENST00000561239 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
SHF-210ENST00000561239 TLR7Q9NYK1 1049 aaKnown RBP16.62■□□□□ 0.25
SHF-210ENST00000561239 ZNF70Q9UC06 446 aaPredicted RBP16.62■□□□□ 0.25
SHF-210ENST00000561239 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
SHF-210ENST00000561239 CA12O43570 354 aa16.61■□□□□ 0.25
SHF-210ENST00000561239 SLF2Q8IX21 1173 aa16.61■□□□□ 0.25
SHF-210ENST00000561239 TDRD3Q9H7E2 651 aaKnown RBP16.61■□□□□ 0.25
SHF-210ENST00000561239 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
SHF-210ENST00000561239 PCDHAC2Q9Y5I4 1007 aa16.61■□□□□ 0.25
SHF-210ENST00000561239 MYH13Q9UKX3 1938 aa16.6■□□□□ 0.25
SHF-210ENST00000561239 THSD7BQ9C0I4 1608 aa16.6■□□□□ 0.25
SHF-210ENST00000561239 UNCXA6NJT0 531 aa16.6■□□□□ 0.25
SHF-210ENST00000561239 AOC2O75106 756 aa16.6■□□□□ 0.25
SHF-210ENST00000561239 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
SHF-210ENST00000561239 RASA3Q14644 834 aa16.6■□□□□ 0.25
SHF-210ENST00000561239 GRIK5Q16478 980 aa16.6■□□□□ 0.25
SHF-210ENST00000561239 SLC10A3P09131 477 aa16.59■□□□□ 0.25
SHF-210ENST00000561239 CCDC158Q5M9N0 1113 aa16.59■□□□□ 0.25
SHF-210ENST00000561239 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
SHF-210ENST00000561239 AACSQ86V21 672 aa16.59■□□□□ 0.25
SHF-210ENST00000561239 CLASRPQ8N2M8 674 aaKnown RBP16.59■□□□□ 0.25
SHF-210ENST00000561239 HOOK2Q96ED9 719 aa16.59■□□□□ 0.25
SHF-210ENST00000561239 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
SHF-210ENST00000561239 CCDC8Q9H0W5 538 aaPredicted RBP16.59■□□□□ 0.25
SHF-210ENST00000561239 HMG20BQ9P0W2 317 aa16.59■□□□□ 0.25
SHF-210ENST00000561239 FAM155AB1AL88 458 aaPredicted RBP16.58■□□□□ 0.24
SHF-210ENST00000561239 UBE2Q2LH0YL09 131 aa16.58■□□□□ 0.24
SHF-210ENST00000561239 FOXN1O15353 648 aa16.58■□□□□ 0.24
SHF-210ENST00000561239 MCAMP43121 646 aa16.58■□□□□ 0.24
SHF-210ENST00000561239 IRX6P78412 446 aaPredicted RBP16.58■□□□□ 0.24
SHF-210ENST00000561239 APOBEC3HQ6NTF7 200 aaKnown RBP16.58■□□□□ 0.24
SHF-210ENST00000561239 DZIP1Q86YF9 867 aaKnown RBP16.58■□□□□ 0.24
SHF-210ENST00000561239 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.24
SHF-210ENST00000561239 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
SHF-210ENST00000561239 AKAP11Q9UKA4 1901 aa16.57■□□□□ 0.24
SHF-210ENST00000561239 TCP10L2B9ZVM9 353 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms