RNA–Protein interactions for RNA: ENST00000561095.1

TICRR-203, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

TSL 1 (best)

Gene TICRR, Length 2,367 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-203ENST00000561095 NCAPD2Q15021 1401 aa16.77■□□□□ 0.27
TICRR-203ENST00000561095 SBNO1A3KN83 1393 aa16.77■□□□□ 0.27
TICRR-203ENST00000561095 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
TICRR-203ENST00000561095 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.27
TICRR-203ENST00000561095 VSNL1P62760 191 aa16.77■□□□□ 0.27
TICRR-203ENST00000561095 KARSQ15046 597 aaKnown RBP16.77■□□□□ 0.27
TICRR-203ENST00000561095 ISM2Q6H9L7 571 aa16.77■□□□□ 0.27
TICRR-203ENST00000561095 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.27
TICRR-203ENST00000561095 ZNF622Q969S3 477 aaKnown RBP eCLIP16.77■□□□□ 0.27
TICRR-203ENST00000561095 CCDC102AQ96A19 550 aa16.77■□□□□ 0.27
TICRR-203ENST00000561095 PHACTR2O75167 634 aa16.76■□□□□ 0.27
TICRR-203ENST00000561095 STK38Q15208 465 aa16.76■□□□□ 0.27
TICRR-203ENST00000561095 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
TICRR-203ENST00000561095 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
TICRR-203ENST00000561095 LRRIQ3A6PVS8 624 aaPredicted RBP16.75■□□□□ 0.27
TICRR-203ENST00000561095 GNAT3A8MTJ3 354 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 SPTLC2O15270 562 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 MICALL1Q8N3F8 863 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 DESI2Q9BSY9 194 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 AGXT2Q9BYV1 514 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 FAM107BQ9H098 131 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 FANCLQ9NW38 375 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 CARMIL3Q8ND23 1372 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 PRPF6O94906 941 aaKnown RBP16.75■□□□□ 0.27
TICRR-203ENST00000561095 PFKFB1P16118 471 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 CMA1P23946 247 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 AARSP49588 968 aaKnown RBP eCLIP16.75■□□□□ 0.27
TICRR-203ENST00000561095 SF3A1Q15459 793 aaKnown RBP16.75■□□□□ 0.27
TICRR-203ENST00000561095 STOX1Q6ZVD7 989 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 BANK1Q8NDB2 785 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 IGSF1Q8N6C5 1336 aa16.75■□□□□ 0.27
TICRR-203ENST00000561095 TUBB2AQ13885 445 aa16.74■□□□□ 0.27
TICRR-203ENST00000561095 TUBB2BQ9BVA1 445 aa16.74■□□□□ 0.27
TICRR-203ENST00000561095 GBP3Q9H0R5 595 aa16.74■□□□□ 0.27
TICRR-203ENST00000561095 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
TICRR-203ENST00000561095 EXOC5O00471 708 aa16.74■□□□□ 0.27
TICRR-203ENST00000561095 SYF2O95926 243 aaKnown RBP16.74■□□□□ 0.27
TICRR-203ENST00000561095 MAP2K2P36507 400 aa16.74■□□□□ 0.27
TICRR-203ENST00000561095 ADKP55263 362 aaKnown RBP16.74■□□□□ 0.27
TICRR-203ENST00000561095 CCT2P78371 535 aaKnown RBP16.74■□□□□ 0.27
TICRR-203ENST00000561095 PLEKHO1Q53GL0 409 aaPredicted RBP16.74■□□□□ 0.27
TICRR-203ENST00000561095 ANKRD20A12PQ8NF67 263 aa16.74■□□□□ 0.27
TICRR-203ENST00000561095 NCOA5Q9HCD5 579 aaKnown RBP16.74■□□□□ 0.27
TICRR-203ENST00000561095 PRR36Q9H6K5 1346 aa16.74■□□□□ 0.27
TICRR-203ENST00000561095 MED1Q15648 1581 aaPredicted RBP16.74■□□□□ 0.27
TICRR-203ENST00000561095 KIF1CO43896 1103 aaKnown RBP16.73■□□□□ 0.27
TICRR-203ENST00000561095 RNF40O75150 1001 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 ERLIN2O94905 339 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 FDPSP14324 419 aaKnown RBP16.73■□□□□ 0.27
TICRR-203ENST00000561095 DHX32Q7L7V1 743 aaKnown RBP16.73■□□□□ 0.27
TICRR-203ENST00000561095 EYA1Q99502 592 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 VIPAS39Q9H9C1 493 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 TUBBP07437 444 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 HMGB1P09429 215 aaKnown RBP16.73■□□□□ 0.27
TICRR-203ENST00000561095 CCDC175P0C221 793 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 ATP6V1AP38606 617 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 SPECC1LQ69YQ0 1117 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 KCNV1Q6PIU1 500 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 PDILTQ8N807 584 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 ACBD3Q9H3P7 528 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 C19orf44Q9H6X5 657 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 MROH7-TTC4A0A0A0MT08 1334 aa16.73■□□□□ 0.27
TICRR-203ENST00000561095 CCDC196A0A1B0GTZ2 297 aa16.72■□□□□ 0.27
TICRR-203ENST00000561095 HNRNPH1P31943 449 aaKnown RBP16.72■□□□□ 0.27
TICRR-203ENST00000561095 EXOSC10Q01780 885 aaKnown RBP16.72■□□□□ 0.27
TICRR-203ENST00000561095 MTF1Q14872 753 aa16.72■□□□□ 0.27
TICRR-203ENST00000561095 TSPOAP1O95153 1857 aa16.72■□□□□ 0.27
TICRR-203ENST00000561095 SHOX2O60902 331 aaPredicted RBP16.72■□□□□ 0.27
TICRR-203ENST00000561095 PPFIA3O75145 1194 aa16.72■□□□□ 0.27
TICRR-203ENST00000561095 RHOXF2BP0C7M4 288 aa16.72■□□□□ 0.27
TICRR-203ENST00000561095 EP400NLQ6ZTU2 488 aa16.72■□□□□ 0.27
TICRR-203ENST00000561095 CLIC6Q96NY7 704 aa16.72■□□□□ 0.27
TICRR-203ENST00000561095 RHOXF2Q9BQY4 288 aa16.72■□□□□ 0.27
TICRR-203ENST00000561095 DIP2CQ9Y2E4 1556 aa16.71■□□□□ 0.27
TICRR-203ENST00000561095 WDR93Q6P2C0 686 aa16.71■□□□□ 0.27
TICRR-203ENST00000561095 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
TICRR-203ENST00000561095 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.71■□□□□ 0.27
TICRR-203ENST00000561095 CHPF2Q9P2E5 772 aa16.71■□□□□ 0.27
TICRR-203ENST00000561095 SUFUQ9UMX1 484 aa16.71■□□□□ 0.27
TICRR-203ENST00000561095 ZNF609O15014 1411 aa16.71■□□□□ 0.27
TICRR-203ENST00000561095 MYSM1Q5VVJ2 828 aa16.71■□□□□ 0.26
TICRR-203ENST00000561095 RPAINQ86UA6 219 aa16.71■□□□□ 0.26
TICRR-203ENST00000561095 ARHGEF25Q86VW2 580 aa16.71■□□□□ 0.26
TICRR-203ENST00000561095 LZTFL1Q9NQ48 299 aa16.71■□□□□ 0.26
TICRR-203ENST00000561095 ADGRG1Q9Y653 693 aa16.71■□□□□ 0.26
TICRR-203ENST00000561095 PDIA3P30101 505 aaKnown RBP16.7■□□□□ 0.26
TICRR-203ENST00000561095 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
TICRR-203ENST00000561095 HPSEQ9Y251 543 aa16.7■□□□□ 0.26
TICRR-203ENST00000561095 A0A0U1RQJ8 604 aa16.7■□□□□ 0.26
TICRR-203ENST00000561095 TFRCP02786 760 aaKnown RBP16.7■□□□□ 0.26
TICRR-203ENST00000561095 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
TICRR-203ENST00000561095 EIF2S2P20042 333 aaKnown RBP16.7■□□□□ 0.26
TICRR-203ENST00000561095 CCDC129Q6ZRS4 1044 aa16.7■□□□□ 0.26
TICRR-203ENST00000561095 CTCFLQ8NI51 663 aaPredicted RBP16.7■□□□□ 0.26
TICRR-203ENST00000561095 ATRIPQ8WXE1 791 aa16.7■□□□□ 0.26
TICRR-203ENST00000561095 ZNF274Q96GC6 653 aaPredicted RBP16.7■□□□□ 0.26
TICRR-203ENST00000561095 MRC1P22897 1456 aa16.69■□□□□ 0.26
TICRR-203ENST00000561095 FLT4P35916 1363 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms