RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SLC9A5Q14940 896 aa2.55□□□□□ -2
RTF1-207ENST00000561076 GRIN2CQ14957 1233 aa2.55□□□□□ -2
RTF1-207ENST00000561076 SART3Q15020 963 aaKnown RBP2.55□□□□□ -2
RTF1-207ENST00000561076 RGL3Q3MIN7 710 aa2.55□□□□□ -2
RTF1-207ENST00000561076 TM4SF20Q53R12 229 aa2.55□□□□□ -2
RTF1-207ENST00000561076 C4orf48Q5BLP8 95 aa2.55□□□□□ -2
RTF1-207ENST00000561076 FAM26DQ5JW98 314 aa2.55□□□□□ -2
RTF1-207ENST00000561076 SLC27A3Q5K4L6 730 aa2.55□□□□□ -2
RTF1-207ENST00000561076 C10orf62Q5T681 223 aaPredicted RBP2.55□□□□□ -2
RTF1-207ENST00000561076 DMRTA1Q5VZB9 504 aa2.55□□□□□ -2
RTF1-207ENST00000561076 ZNF280DQ6N043 979 aa2.55□□□□□ -2
RTF1-207ENST00000561076 CCDC174Q6PII3 467 aa2.55□□□□□ -2
RTF1-207ENST00000561076 XKR5Q6UX68 686 aa2.55□□□□□ -2
RTF1-207ENST00000561076 CLEC4GQ6UXB4 293 aa2.55□□□□□ -2
RTF1-207ENST00000561076 MAMSTRQ6ZN01 415 aa2.55□□□□□ -2
RTF1-207ENST00000561076 FAM196AQ6ZSG2 479 aa2.55□□□□□ -2
RTF1-207ENST00000561076 SLITRK4Q8IW52 837 aa2.55□□□□□ -2
RTF1-207ENST00000561076 FAM178BQ8IXR5 827 aa2.55□□□□□ -2
RTF1-207ENST00000561076 PPM1KQ8N3J5 372 aa2.55□□□□□ -2
RTF1-207ENST00000561076 ENAHQ8N8S7 591 aaPredicted RBP2.55□□□□□ -2
RTF1-207ENST00000561076 TEX19Q8NA77 164 aa2.55□□□□□ -2
RTF1-207ENST00000561076 PHC3Q8NDX5 983 aa2.55□□□□□ -2
RTF1-207ENST00000561076 ACRBPQ8NEB7 543 aa2.55□□□□□ -2
RTF1-207ENST00000561076 MYRIPQ8NFW9 859 aa2.55□□□□□ -2
RTF1-207ENST00000561076 WDR66Q8TBY9 1149 aa2.55□□□□□ -2
RTF1-207ENST00000561076 LEO1Q8WVC0 666 aaPredicted RBP2.55□□□□□ -2
RTF1-207ENST00000561076 USP7Q93009 1102 aa2.55□□□□□ -2
RTF1-207ENST00000561076 PPP1R14AQ96A00 147 aa2.55□□□□□ -2
RTF1-207ENST00000561076 XAGE2Q96GT9 111 aa2.55□□□□□ -2
RTF1-207ENST00000561076 TNIP3Q96KP6 325 aa2.55□□□□□ -2
RTF1-207ENST00000561076 TRIM56Q9BRZ2 755 aaKnown RBP2.55□□□□□ -2
RTF1-207ENST00000561076 ESYT1Q9BSJ8 1104 aa2.55□□□□□ -2
RTF1-207ENST00000561076 MTA3Q9BTC8 594 aa2.55□□□□□ -2
RTF1-207ENST00000561076 ZNF700Q9H0M5 742 aa2.55□□□□□ -2
RTF1-207ENST00000561076 FBRSQ9HAH7 460 aa2.55□□□□□ -2
RTF1-207ENST00000561076 LIN7BQ9HAP6 207 aa2.55□□□□□ -2
RTF1-207ENST00000561076 SLC5A4Q9NY91 659 aa2.55□□□□□ -2
RTF1-207ENST00000561076 ABI2Q9NYB9 513 aaPredicted RBP2.55□□□□□ -2
RTF1-207ENST00000561076 LRP2BPQ9P2M1 347 aa2.55□□□□□ -2
RTF1-207ENST00000561076 PUF60Q9UHX1 559 aaKnown RBP2.55□□□□□ -2
RTF1-207ENST00000561076 ZMYM5Q9UJ78 669 aa2.55□□□□□ -2
RTF1-207ENST00000561076 MAPRE3Q9UPY8 281 aa2.55□□□□□ -2
RTF1-207ENST00000561076 TLR6Q9Y2C9 796 aa2.55□□□□□ -2
RTF1-207ENST00000561076 FCF1Q9Y324 198 aaKnown RBP2.55□□□□□ -2
RTF1-207ENST00000561076 RTCBQ9Y3I0 505 aaKnown RBP2.55□□□□□ -2
RTF1-207ENST00000561076 WASHC2CQ9Y4E1 1318 aa2.55□□□□□ -2
RTF1-207ENST00000561076 TMEM238LA0A1B0GVL6 79 aa2.54□□□□□ -2
RTF1-207ENST00000561076 RASSF10A6NK89 507 aa2.54□□□□□ -2
RTF1-207ENST00000561076 FAM177BA6PVY3 158 aa2.54□□□□□ -2
RTF1-207ENST00000561076 EREGO14944 169 aa2.54□□□□□ -2
RTF1-207ENST00000561076 KHNYNO15037 678 aaKnown RBP2.54□□□□□ -2
RTF1-207ENST00000561076 TLL1O43897 1013 aa2.54□□□□□ -2
RTF1-207ENST00000561076 ZNF500O60304 480 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 GREM1O60565 184 aa2.54□□□□□ -2
RTF1-207ENST00000561076 DIAPH1O60610 1272 aaKnown RBP2.54□□□□□ -2
RTF1-207ENST00000561076 XYLBO75191 536 aa2.54□□□□□ -2
RTF1-207ENST00000561076 ARAFP10398 606 aa2.54□□□□□ -2
RTF1-207ENST00000561076 CALRP27797 417 aaKnown RBP2.54□□□□□ -2
RTF1-207ENST00000561076 ZEB1P37275 1124 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 PLA2G4AP47712 749 aa2.54□□□□□ -2
RTF1-207ENST00000561076 BCAMP50895 628 aa2.54□□□□□ -2
RTF1-207ENST00000561076 HNRNPUQ00839 825 aaKnown RBP eCLIP2.54□□□□□ -2
RTF1-207ENST00000561076 CENPCQ03188 943 aa2.54□□□□□ -2
RTF1-207ENST00000561076 STRN3Q13033 797 aa2.54□□□□□ -2
RTF1-207ENST00000561076 BIRC3Q13489 604 aa2.54□□□□□ -2
RTF1-207ENST00000561076 PIN1Q13526 163 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 MPP2Q14168 576 aa2.54□□□□□ -2
RTF1-207ENST00000561076 NCAPHQ15003 741 aa2.54□□□□□ -2
RTF1-207ENST00000561076 LRRC14Q15048 493 aa2.54□□□□□ -2
RTF1-207ENST00000561076 LONRF2Q1L5Z9 754 aa2.54□□□□□ -2
RTF1-207ENST00000561076 LRRFIP1Q32MZ4 808 aaKnown RBP2.54□□□□□ -2
RTF1-207ENST00000561076 ALFQ53S48 1182 aa2.54□□□□□ -2
RTF1-207ENST00000561076 ARSJQ5FYB0 599 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 VARS2Q5ST30 1063 aaKnown RBP2.54□□□□□ -2
RTF1-207ENST00000561076 PPP1R26Q5T8A7 1209 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 SH3PXD2AQ5TCZ1 1133 aa2.54□□□□□ -2
RTF1-207ENST00000561076 KIAA0319Q5VV43 1072 aa2.54□□□□□ -2
RTF1-207ENST00000561076 RNF219Q5W0B1 726 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 HGSNATQ68CP4 663 aa2.54□□□□□ -2
RTF1-207ENST00000561076 C6orf15Q6UXA7 325 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 SPATC1Q76KD6 591 aa2.54□□□□□ -2
RTF1-207ENST00000561076 NECAB2Q7Z6G3 386 aa2.54□□□□□ -2
RTF1-207ENST00000561076 PCGF5Q86SE9 256 aa2.54□□□□□ -2
RTF1-207ENST00000561076 NCAPG2Q86XI2 1143 aa2.54□□□□□ -2
RTF1-207ENST00000561076 THNSL2Q86YJ6 484 aa2.54□□□□□ -2
RTF1-207ENST00000561076 RAVER1Q8IY67 606 aaKnown RBP2.54□□□□□ -2
RTF1-207ENST00000561076 IFNL3Q8IZI9 196 aa2.54□□□□□ -2
RTF1-207ENST00000561076 ANKRD42Q8N9B4 389 aa2.54□□□□□ -2
RTF1-207ENST00000561076 TTC8Q8TAM2 541 aa2.54□□□□□ -2
RTF1-207ENST00000561076 SLC7A3Q8WY07 619 aa2.54□□□□□ -2
RTF1-207ENST00000561076 WNT2BQ93097 391 aa2.54□□□□□ -2
RTF1-207ENST00000561076 E2F7Q96AV8 911 aa2.54□□□□□ -2
RTF1-207ENST00000561076 ZNF669Q96BR6 464 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 RUNDC1Q96C34 613 aa2.54□□□□□ -2
RTF1-207ENST00000561076 CHMP4CQ96CF2 233 aa2.54□□□□□ -2
RTF1-207ENST00000561076 CDC5LQ99459 802 aaKnown RBP2.54□□□□□ -2
RTF1-207ENST00000561076 KIF2CQ99661 725 aa2.54□□□□□ -2
RTF1-207ENST00000561076 SPATA9Q9BWV2 254 aa2.54□□□□□ -2
RTF1-207ENST00000561076 CBX8Q9HC52 389 aa2.54□□□□□ -2
RTF1-207ENST00000561076 LUC7LQ9NQ29 371 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms