RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 SSC5DA1L4H1 1573 aa23.35■■□□□ 1.33
LINC01220-202ENST00000561000 AKAP11Q9UKA4 1901 aa23.35■■□□□ 1.33
LINC01220-202ENST00000561000 GPR25O00155 361 aa23.35■■□□□ 1.33
LINC01220-202ENST00000561000 CT47B1P0C2W7 299 aaPredicted RBP23.35■■□□□ 1.33
LINC01220-202ENST00000561000 UBTFL1P0CB47 393 aaPredicted RBP23.35■■□□□ 1.33
LINC01220-202ENST00000561000 WNK4Q96J92 1243 aa23.35■■□□□ 1.33
LINC01220-202ENST00000561000 MANSC4A6NHS7 340 aaPredicted RBP23.34■■□□□ 1.33
LINC01220-202ENST00000561000 FGFR2P21802 821 aa23.34■■□□□ 1.33
LINC01220-202ENST00000561000 API5Q9BZZ5 524 aaKnown RBP23.34■■□□□ 1.33
LINC01220-202ENST00000561000 R3HDMLQ9H3Y0 253 aa23.34■■□□□ 1.33
LINC01220-202ENST00000561000 UNCXA6NJT0 531 aa23.33■■□□□ 1.33
LINC01220-202ENST00000561000 ZBTB48P10074 688 aaPredicted RBP23.33■■□□□ 1.33
LINC01220-202ENST00000561000 SLC5A1P13866 664 aa23.33■■□□□ 1.33
LINC01220-202ENST00000561000 TNNI2P48788 182 aa23.33■■□□□ 1.33
LINC01220-202ENST00000561000 INHBEP58166 350 aa23.33■■□□□ 1.33
LINC01220-202ENST00000561000 TEKT1Q969V4 418 aa23.33■■□□□ 1.33
LINC01220-202ENST00000561000 SIL1Q9H173 461 aa23.33■■□□□ 1.33
LINC01220-202ENST00000561000 ALDH1A1P00352 501 aa23.32■■□□□ 1.32
LINC01220-202ENST00000561000 IFNL1Q8IU54 200 aa23.32■■□□□ 1.32
LINC01220-202ENST00000561000 CDAN1Q8IWY9 1227 aa23.32■■□□□ 1.32
LINC01220-202ENST00000561000 ANKRD13AQ8IZ07 590 aa23.32■■□□□ 1.32
LINC01220-202ENST00000561000 LPIN2Q92539 896 aa23.32■■□□□ 1.32
LINC01220-202ENST00000561000 TMEM39BQ9GZU3 492 aa23.32■■□□□ 1.32
LINC01220-202ENST00000561000 FKTNO75072 461 aa23.31■■□□□ 1.32
LINC01220-202ENST00000561000 CACNB3P54284 484 aa23.31■■□□□ 1.32
LINC01220-202ENST00000561000 HDLBPQ00341 1268 aaKnown RBP23.31■■□□□ 1.32
LINC01220-202ENST00000561000 ATG9AQ7Z3C6 839 aa23.31■■□□□ 1.32
LINC01220-202ENST00000561000 TEPSINQ96N21 525 aa23.31■■□□□ 1.32
LINC01220-202ENST00000561000 PKN2Q16513 984 aaKnown RBP23.3■■□□□ 1.32
LINC01220-202ENST00000561000 ELP3Q9H9T3 547 aa23.3■■□□□ 1.32
LINC01220-202ENST00000561000 CEP126Q9P2H0 1117 aa23.3■■□□□ 1.32
LINC01220-202ENST00000561000 KIF16BQ96L93 1317 aa23.3■■□□□ 1.32
LINC01220-202ENST00000561000 GJA5P36382 358 aa23.29■■□□□ 1.32
LINC01220-202ENST00000561000 RARSP54136 660 aaKnown RBP23.29■■□□□ 1.32
LINC01220-202ENST00000561000 SOX10P56693 466 aa23.29■■□□□ 1.32
LINC01220-202ENST00000561000 NOM1Q5C9Z4 860 aaKnown RBP23.29■■□□□ 1.32
LINC01220-202ENST00000561000 MRIQ9BWK5 157 aa23.29■■□□□ 1.32
LINC01220-202ENST00000561000 CFHR5Q9BXR6 569 aa23.29■■□□□ 1.32
LINC01220-202ENST00000561000 HPS5Q9UPZ3 1129 aa23.29■■□□□ 1.32
LINC01220-202ENST00000561000 HDAC5Q9UQL6 1122 aa23.29■■□□□ 1.32
LINC01220-202ENST00000561000 LRRFIP2Q9Y608 721 aaKnown RBP23.29■■□□□ 1.32
LINC01220-202ENST00000561000 IGF2BP3O00425 579 aaKnown RBP eCLIP23.28■■□□□ 1.32
LINC01220-202ENST00000561000 ZDHHC15Q96MV8 337 aa23.28■■□□□ 1.32
LINC01220-202ENST00000561000 TMOD2Q9NZR1 351 aa23.28■■□□□ 1.32
LINC01220-202ENST00000561000 SUGT1Q9Y2Z0 365 aa23.28■■□□□ 1.32
LINC01220-202ENST00000561000 MAST3O60307 1309 aa23.28■■□□□ 1.32
LINC01220-202ENST00000561000 ATP2B3Q16720 1220 aa23.27■■□□□ 1.32
LINC01220-202ENST00000561000 OTUD7BQ6GQQ9 843 aa23.27■■□□□ 1.32
LINC01220-202ENST00000561000 WDR66Q8TBY9 1149 aa23.27■■□□□ 1.32
LINC01220-202ENST00000561000 OPTNQ96CV9 577 aa23.27■■□□□ 1.32
LINC01220-202ENST00000561000 PA2G4Q9UQ80 394 aaKnown RBP23.27■■□□□ 1.32
LINC01220-202ENST00000561000 CIAO1O76071 339 aa23.26■■□□□ 1.31
LINC01220-202ENST00000561000 MAP3K9P80192 1104 aa23.26■■□□□ 1.31
LINC01220-202ENST00000561000 APOBEC3HQ6NTF7 200 aaKnown RBP23.26■■□□□ 1.31
LINC01220-202ENST00000561000 MEIS3Q99687 375 aa23.26■■□□□ 1.31
LINC01220-202ENST00000561000 FBXO3Q9UK99 471 aa23.26■■□□□ 1.31
LINC01220-202ENST00000561000 HHIPL2Q6UWX4 724 aa23.25■■□□□ 1.31
LINC01220-202ENST00000561000 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.25■■□□□ 1.31
LINC01220-202ENST00000561000 GNL3LQ9NVN8 582 aaKnown RBP23.25■■□□□ 1.31
LINC01220-202ENST00000561000 IL15P40933 162 aaPredicted RBP23.24■■□□□ 1.31
LINC01220-202ENST00000561000 CNKSR2Q8WXI2 1034 aa23.24■■□□□ 1.31
LINC01220-202ENST00000561000 CSADQ9Y600 493 aa23.24■■□□□ 1.31
LINC01220-202ENST00000561000 VGLL4Q14135 290 aa23.23■■□□□ 1.31
LINC01220-202ENST00000561000 ARHGAP45Q92619 1136 aa23.23■■□□□ 1.31
LINC01220-202ENST00000561000 PTPN18Q99952 460 aa23.23■■□□□ 1.31
LINC01220-202ENST00000561000 ECM29Q5VYK3 1845 aa23.23■■□□□ 1.31
LINC01220-202ENST00000561000 FBXO46Q6PJ61 603 aaPredicted RBP23.22■■□□□ 1.31
LINC01220-202ENST00000561000 FAM83AQ86UY5 434 aa23.22■■□□□ 1.31
LINC01220-202ENST00000561000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.22■■□□□ 1.31
LINC01220-202ENST00000561000 TESPA1A2RU30 521 aaPredicted RBP23.21■■□□□ 1.31
LINC01220-202ENST00000561000 GNAI3P08754 354 aa23.21■■□□□ 1.31
LINC01220-202ENST00000561000 HNRNPUQ00839 825 aaKnown RBP eCLIP23.21■■□□□ 1.31
LINC01220-202ENST00000561000 FKBP1CQ5VVH2 108 aa23.21■■□□□ 1.31
LINC01220-202ENST00000561000 INTS3Q68E01 1043 aaKnown RBP23.21■■□□□ 1.31
LINC01220-202ENST00000561000 COPRSQ9NQ92 184 aa23.21■■□□□ 1.31
LINC01220-202ENST00000561000 LDHBP07195 334 aaKnown RBP23.2■■□□□ 1.3
LINC01220-202ENST00000561000 PRDX5P30044 214 aa23.2■■□□□ 1.3
LINC01220-202ENST00000561000 PHKA1P46020 1223 aa23.2■■□□□ 1.3
LINC01220-202ENST00000561000 CRHR2Q13324 411 aa23.2■■□□□ 1.3
LINC01220-202ENST00000561000 DIXDC1Q155Q3 683 aa23.2■■□□□ 1.3
LINC01220-202ENST00000561000 FRAT1Q92837 279 aaPredicted RBP23.2■■□□□ 1.3
LINC01220-202ENST00000561000 HOOK2Q96ED9 719 aa23.2■■□□□ 1.3
LINC01220-202ENST00000561000 OTUD5Q96G74 571 aa23.2■■□□□ 1.3
LINC01220-202ENST00000561000 MS4A4AQ96JQ5 239 aa23.2■■□□□ 1.3
LINC01220-202ENST00000561000 TRIM17Q9Y577 477 aa23.2■■□□□ 1.3
LINC01220-202ENST00000561000 IPO8O15397 1037 aaKnown RBP23.19■■□□□ 1.3
LINC01220-202ENST00000561000 ADORA1P30542 326 aa23.19■■□□□ 1.3
LINC01220-202ENST00000561000 GTF2A2P52657 109 aa23.19■■□□□ 1.3
LINC01220-202ENST00000561000 WRNIP1Q96S55 665 aa23.19■■□□□ 1.3
LINC01220-202ENST00000561000 DENND2AQ9ULE3 1009 aa23.19■■□□□ 1.3
LINC01220-202ENST00000561000 DAGLAQ9Y4D2 1042 aa23.19■■□□□ 1.3
LINC01220-202ENST00000561000 CCL15-CCL14A0A0B4J2E2 113 aa23.18■■□□□ 1.3
LINC01220-202ENST00000561000 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
LINC01220-202ENST00000561000 BCAR3O75815 825 aa23.18■■□□□ 1.3
LINC01220-202ENST00000561000 TIMM10P62072 90 aa23.18■■□□□ 1.3
LINC01220-202ENST00000561000 CCL15Q16663 113 aa23.18■■□□□ 1.3
LINC01220-202ENST00000561000 DCAF15Q66K64 600 aa23.18■■□□□ 1.3
LINC01220-202ENST00000561000 CDC42EP5Q6NZY7 148 aa23.18■■□□□ 1.3
LINC01220-202ENST00000561000 MIGA2Q7L4E1 593 aa23.18■■□□□ 1.3
LINC01220-202ENST00000561000 BRI3BPQ8WY22 251 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms