RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 HSPD1P10809 573 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 PDCP20941 246 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 ITGA6P23229 1130 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 FKBP4Q02790 459 aaKnown RBP eCLIP16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 DZIP3Q86Y13 1208 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 ABCC12Q96J65 1359 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 ANKRD18BA2A2Z9 1011 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 GOLGA6L19H0YKK7 550 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 LIG1P18858 919 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 KCNJ6P48051 423 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 STK3Q13188 491 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 TPRNQ4KMQ1 711 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 METTL24Q5JXM2 366 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 GTF3C6Q969F1 213 aa16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 GEMIN8Q9NWZ8 242 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-220ENST00000560998 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 TPM1P09493 284 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 PLA2G4AP47712 749 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 CLCN6P51797 869 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 SCARF1Q14162 830 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 TBC1D2BQ9UPU7 963 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 MYH7P12883 1935 aa16.19■□□□□ 0.18
RABGGTA-220ENST00000560998 GOLGA6L4A6NEF3 574 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 USP27XA6NNY8 438 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 PDE8AO60658 829 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 ADAMTS2O95450 1211 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 ZFYP08048 801 aaPredicted RBP16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 CHRM1P11229 460 aaPredicted RBP16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 CCZ1BP86790 482 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 CCZ1P86791 482 aaPredicted RBP16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 CDC37L1Q7L3B6 337 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 DHX32Q7L7V1 743 aaKnown RBP16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 ZNF34Q8IZ26 560 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 RGS22Q8NE09 1264 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 DACT1Q9NYF0 836 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 LTBP4Q8N2S1 1624 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 DDB1Q16531 1140 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 CCDC93Q567U6 631 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 TMCO3Q6UWJ1 677 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 AKAP11Q9UKA4 1901 aa16.18■□□□□ 0.18
RABGGTA-220ENST00000560998 RREB1Q92766 1687 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 CCDC69A6NI79 296 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 ZAP70P43403 619 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 EIF5P55010 431 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 EXOSC10Q01780 885 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 CAMK4Q16566 473 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 INTS5Q6P9B9 1019 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 CKAP2LQ8IYA6 745 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 VGLL2Q8N8G2 317 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 SRRTQ9BXP5 876 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 UBXN6Q9BZV1 441 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 CNNM1Q9NRU3 951 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 SLIT2O94813 1529 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 LRP5O75197 1615 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 PSDA5PKW4 1024 aaPredicted RBP16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 E7EWF7 191 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 HSP90B1P14625 803 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 SNW1Q13573 536 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 BRF1Q92994 677 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 LRRC2Q9BYS8 371 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 IMPACTQ9P2X3 320 aa16.17■□□□□ 0.18
RABGGTA-220ENST00000560998 CTAGE5O15320 804 aa16.16■□□□□ 0.18
RABGGTA-220ENST00000560998 JAK2O60674 1132 aa16.16■□□□□ 0.18
RABGGTA-220ENST00000560998 IQCB1Q15051 598 aa16.16■□□□□ 0.18
RABGGTA-220ENST00000560998 ZNF512BQ96KM6 892 aaPredicted RBP16.16■□□□□ 0.18
RABGGTA-220ENST00000560998 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
RABGGTA-220ENST00000560998 PSD3Q9NYI0 1048 aa16.16■□□□□ 0.18
RABGGTA-220ENST00000560998 NWD2Q9ULI1 1742 aa16.16■□□□□ 0.18
RABGGTA-220ENST00000560998 FOXP2O15409 715 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 PFKFB2O60825 505 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 NOP2P46087 812 aaKnown RBP16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 PI16Q6UXB8 463 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 MARCH10Q8NA82 808 aaPredicted RBP16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 AGXT2Q9BYV1 514 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 DNAJC25Q9H1X3 360 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 RSPH14Q9UHP6 348 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 CICQ96RK0 1608 aaPredicted RBP16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 CCP110O43303 1012 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 CASQ1P31415 396 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 MCAMP43121 646 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 WASHC4Q2M389 1173 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 ERCC6LQ2NKX8 1250 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 GOLGA6L1Q8N7Z2 621 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 APPBP2Q92624 585 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 AK7Q96M32 723 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 BRMS1Q9HCU9 246 aa16.15■□□□□ 0.18
RABGGTA-220ENST00000560998 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms