RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 RALBP1Q15311 655 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 NEUROD2Q15784 382 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 USP17L1Q7RTZ2 530 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 CFHR5Q9BXR6 569 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 V9GY48 417 aaPredicted RBP8.33□□□□□ -1.08
USP8-213ENST00000560885 BRCA2P51587 3418 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 TRIM6-TRIM34B2RNG4 842 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 UBE2Q2LH0YL09 131 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 GPR25O00155 361 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 PCCAP05165 728 aaPredicted RBP8.32□□□□□ -1.08
USP8-213ENST00000560885 ATP2B4P23634 1241 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 NF2P35240 595 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 SREBF2Q12772 1141 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 DUSP27Q5VZP5 1158 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 FBXO46Q6PJ61 603 aaPredicted RBP8.32□□□□□ -1.08
USP8-213ENST00000560885 MOB2Q70IA6 237 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 OGFOD1Q8N543 542 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 RUNDC1Q96C34 613 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 GCC1Q96CN9 775 aa8.32□□□□□ -1.08
USP8-213ENST00000560885 MYO3BQ8WXR4 1341 aa8.31□□□□□ -1.08
USP8-213ENST00000560885 TTLL12Q14166 644 aaPredicted RBP8.31□□□□□ -1.08
USP8-213ENST00000560885 NBPF9Q3BBW0 867 aa8.31□□□□□ -1.08
USP8-213ENST00000560885 ANKRD18AQ8IVF6 992 aa8.31□□□□□ -1.08
USP8-213ENST00000560885 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
USP8-213ENST00000560885 CWC25Q9NXE8 425 aaPredicted RBP8.31□□□□□ -1.08
USP8-213ENST00000560885 MED23Q9ULK4 1368 aa8.31□□□□□ -1.08
USP8-213ENST00000560885 WNT10BO00744 389 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 FKTNO75072 461 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 ALDH1A1P00352 501 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 INHBEP58166 350 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 DACT2Q5SW24 774 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 STRIP1Q5VSL9 837 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 PRAMEF18Q5VWM3 479 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 CCDC146Q8IYE0 955 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
USP8-213ENST00000560885 MYD88Q99836 296 aa8.3□□□□□ -1.08
USP8-213ENST00000560885 LARP6Q9BRS8 491 aaKnown RBP8.3□□□□□ -1.08
USP8-213ENST00000560885 PHAXQ9H814 394 aaKnown RBP8.3□□□□□ -1.08
USP8-213ENST00000560885 SCAF8Q9UPN6 1271 aaKnown RBP8.3□□□□□ -1.08
USP8-213ENST00000560885 DDX58O95786 925 aaKnown RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 CCT4P50991 539 aaKnown RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 WDR43Q15061 677 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP8-213ENST00000560885 LDLRAD1Q5T700 205 aa8.29□□□□□ -1.08
USP8-213ENST00000560885 INTS3Q68E01 1043 aaKnown RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 ARMC9Q7Z3E5 817 aa8.29□□□□□ -1.08
USP8-213ENST00000560885 APOBEC3FQ8IUX4 373 aaKnown RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 COA1Q9GZY4 146 aa8.29□□□□□ -1.08
USP8-213ENST00000560885 MBIPQ9NS73 344 aa8.29□□□□□ -1.08
USP8-213ENST00000560885 BSDC1Q9NW68 430 aaPredicted RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 SEPT9Q9UHD8 586 aaPredicted RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
USP8-213ENST00000560885 COL1A1P02452 1464 aaPredicted RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 MYBBP1AQ9BQG0 1328 aaKnown RBP8.29□□□□□ -1.08
USP8-213ENST00000560885 A0A1B0GUL6 1792 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 WTIPA6NIX2 430 aaPredicted RBP8.28□□□□□ -1.08
USP8-213ENST00000560885 UNCXA6NJT0 531 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 ZNF853P0CG23 659 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 CTSWP56202 376 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 PTPN12Q05209 780 aaKnown RBP8.28□□□□□ -1.08
USP8-213ENST00000560885 CALD1Q05682 793 aaKnown RBP8.28□□□□□ -1.08
USP8-213ENST00000560885 C6orf132Q5T0Z8 1188 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 SPRYD7Q5W111 196 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 TTLL11Q8NHH1 800 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 EMILIN3Q9NT22 766 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 LEMD3Q9Y2U8 911 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 CACNA1FO60840 1977 aa8.28□□□□□ -1.08
USP8-213ENST00000560885 MANSC4A6NHS7 340 aaPredicted RBP8.27□□□□□ -1.09
USP8-213ENST00000560885 ZBTB48P10074 688 aaPredicted RBP8.27□□□□□ -1.09
USP8-213ENST00000560885 GNAI1P63096 354 aa8.27□□□□□ -1.09
USP8-213ENST00000560885 CCDC30Q5VVM6 783 aa8.27□□□□□ -1.09
USP8-213ENST00000560885 TTLL5Q6EMB2 1281 aa8.27□□□□□ -1.09
USP8-213ENST00000560885 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.09
USP8-213ENST00000560885 ZBED3Q96IU2 234 aaPredicted RBP8.27□□□□□ -1.09
USP8-213ENST00000560885 MXD3Q9BW11 206 aa8.27□□□□□ -1.09
USP8-213ENST00000560885 R3HDMLQ9H3Y0 253 aa8.27□□□□□ -1.09
USP8-213ENST00000560885 IFT57Q9NWB7 429 aa8.27□□□□□ -1.09
USP8-213ENST00000560885 ANGEL1Q9UNK9 670 aaKnown RBP8.27□□□□□ -1.09
USP8-213ENST00000560885 ADAMTS8Q9UP79 889 aa8.27□□□□□ -1.09
USP8-213ENST00000560885 OTOFQ9HC10 1997 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 ELL2O00472 640 aaPredicted RBP8.26□□□□□ -1.09
USP8-213ENST00000560885 SASH1O94885 1247 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 NEXNQ0ZGT2 675 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 PRKG1Q13976 671 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 MAP3K11Q16584 847 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 HABP4Q5JVS0 413 aaKnown RBP8.26□□□□□ -1.09
USP8-213ENST00000560885 KSR2Q6VAB6 950 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 OTOP1Q7RTM1 612 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 TXNRD3Q86VQ6 643 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 MTMR14Q8NCE2 650 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 ANKRD2Q9GZV1 360 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 GREM2Q9H772 168 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 MAP3K2Q9Y2U5 619 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 PPP2R3BQ9Y5P8 575 aa8.26□□□□□ -1.09
USP8-213ENST00000560885 ZNF804BA4D1E1 1349 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms