RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 WASHC4Q2M389 1173 aa8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 CCDC102BQ68D86 513 aa8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 ARHGAP27Q6ZUM4 889 aa8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 FBXO33Q7Z6M2 555 aa8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 SKAP1Q86WV1 359 aa8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 FAM84BQ96KN1 310 aaPredicted RBP8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 VPS33BQ9H267 617 aa8.63□□□□□ -1.03
CTDSPL2-210ENST00000560834 YDJCA8MPS7 323 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 ECE2O60344 883 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 GRIN3BO60391 1043 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 IFIT2P09913 472 aaKnown RBP8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 IL1R1P14778 569 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 BCAMP50895 628 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 SCARF1Q14162 830 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 DOK7Q18PE1 504 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 TSHZ3Q63HK5 1081 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 ZNF804AQ7Z570 1209 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 PI4K2BQ8TCG2 481 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 NEUROD6Q96NK8 337 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 ZC3H12CQ9C0D7 883 aaKnown RBP8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 COA1Q9GZY4 146 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 DBNDD1Q9H9R9 158 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 CD209Q9NNX6 404 aa8.62□□□□□ -1.03
CTDSPL2-210ENST00000560834 AOX1Q06278 1338 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 PDS5AQ29RF7 1337 aaKnown RBP8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 TTC41PQ6P2S7 1318 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 ZNF541Q9H0D2 1346 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 WDR90Q96KV7 1748 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 MX1P20591 662 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 LMNB1P20700 586 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 HIBADHP31937 336 aaKnown RBP8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 MCAMP43121 646 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 RASGRF1Q13972 1273 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 E2F4Q16254 413 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 CAVIN4Q5BKX8 364 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 PI16Q6UXB8 463 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 LARGE2Q8N3Y3 721 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 TDRD7Q8NHU6 1098 aaKnown RBP8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 ZNF512BQ96KM6 892 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 STAP2Q9UGK3 403 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 IQSEC3Q9UPP2 1182 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 ECM29Q5VYK3 1845 aa8.61□□□□□ -1.03
CTDSPL2-210ENST00000560834 FZD9O00144 591 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 SEMA3EO15041 775 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 PDE1AP54750 535 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 TTC39AQ5SRH9 613 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 C9orf131Q5VYM1 1079 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 NIM1KQ8IY84 436 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 OSBPL3Q9H4L5 887 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 ECHDC1Q9NTX5 307 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 RNF181Q9P0P0 153 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 HMG20BQ9P0W2 317 aa8.6□□□□□ -1.03
CTDSPL2-210ENST00000560834 FAM205AQ6ZU69 1335 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 ZC3H4Q9UPT8 1303 aaKnown RBP8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 UQCRFS1P1P0C7P4 283 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 GSPT1P15170 499 aaKnown RBP8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 ATP5JP18859 108 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 CCDC158Q5M9N0 1113 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 GORABQ5T7V8 394 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 PODNQ7Z5L7 613 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 VPS37DQ86XT2 251 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 GPATCH3Q96I76 525 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 KCNQ5Q9NR82 932 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 ZNRF3Q9ULT6 936 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 JAG2Q9Y219 1238 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 NDUFB9Q9Y6M9 179 aa8.59□□□□□ -1.03
CTDSPL2-210ENST00000560834 SALL1Q9NSC2 1324 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 CDK5RAP2Q96SN8 1893 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 DDX60LQ5H9U9 1706 aaKnown RBP8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 GLRX3O76003 335 aaKnown RBP8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 ZAP70P43403 619 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 CHAF1AQ13111 956 aaPredicted RBP8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 DACT2Q5SW24 774 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 CERS5Q8N5B7 392 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 SPATA5Q8NB90 893 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 JDP2Q8WYK2 163 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 EDC3Q96F86 508 aaKnown RBP8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 HAUS7Q99871 368 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 DENND2AQ9ULE3 1009 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 SCN4AP35499 1836 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 FOCADQ5VW36 1801 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 MYH2Q9UKX2 1941 aa8.58□□□□□ -1.04
CTDSPL2-210ENST00000560834 USP17L3A6NCW0 530 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 USP17L4A6NCW7 530 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 G3V3G9 751 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 PSMD14O00487 310 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 RAD17O75943 681 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 CYP2E1P05181 493 aaPredicted RBP8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 FKBP1AP62942 108 aaKnown RBP8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 GTF2IP78347 998 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 CXCL9Q07325 125 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 GRIK5Q16478 980 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 TTC22Q5TAA0 569 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 STRIP1Q5VSL9 837 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms