RNA–Protein interactions for RNA: ENST00000560818.1

AC016044.1-201, humanhuman

TSL 4 BASIC

Gene AC016044.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016044.1-201ENST00000560818 TRIM17Q9Y577 477 aa17.91■□□□□ 0.46
AC016044.1-201ENST00000560818 ECM29Q5VYK3 1845 aa17.91■□□□□ 0.46
AC016044.1-201ENST00000560818 HDLBPQ00341 1268 aaKnown RBP17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 CRHR2Q13324 411 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 GRIK5Q16478 980 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 METTL24Q5JXM2 366 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 VPS37DQ86XT2 251 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 CDAN1Q8IWY9 1227 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 TBC1D22AQ8WUA7 517 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 OPTNQ96CV9 577 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 ELP3Q9H9T3 547 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 PDE4DIPQ5VU43 2346 aa17.9■□□□□ 0.46
AC016044.1-201ENST00000560818 TCP10L2B9ZVM9 353 aa17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 PDE8BO95263 885 aa17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 TNNI2P48788 182 aa17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 CAVIN4Q5BKX8 364 aa17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 ERO1AQ96HE7 468 aa17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 TMEM39BQ9GZU3 492 aa17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 IQSEC3Q9UPP2 1182 aaPredicted RBP17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 PTPRCP08575 1304 aa17.89■□□□□ 0.45
AC016044.1-201ENST00000560818 CHAF1AQ13111 956 aaPredicted RBP17.88■□□□□ 0.45
AC016044.1-201ENST00000560818 MS4A4AQ96JQ5 239 aa17.88■□□□□ 0.45
AC016044.1-201ENST00000560818 CENPFP49454 3210 aa17.88■□□□□ 0.45
AC016044.1-201ENST00000560818 FRAT2O75474 233 aaPredicted RBP17.87■□□□□ 0.45
AC016044.1-201ENST00000560818 MAP3K9P80192 1104 aa17.87■□□□□ 0.45
AC016044.1-201ENST00000560818 INTS3Q68E01 1043 aaKnown RBP17.87■□□□□ 0.45
AC016044.1-201ENST00000560818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.87■□□□□ 0.45
AC016044.1-201ENST00000560818 CD99L2Q8TCZ2 262 aa17.87■□□□□ 0.45
AC016044.1-201ENST00000560818 MRIQ9BWK5 157 aa17.87■□□□□ 0.45
AC016044.1-201ENST00000560818 LAMB1P07942 1786 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 BCAMP50895 628 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 SP3Q02447 781 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 VGLL4Q14135 290 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 TEKT1Q969V4 418 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 ZDHHC15Q96MV8 337 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 PTPN22Q9Y2R2 807 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
AC016044.1-201ENST00000560818 E9PSI1 815 aa17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 FGFR2P21802 821 aa17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 MKI67P46013 3256 aaKnown RBP17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 GTF2A2P52657 109 aa17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 BRI3BPQ8WY22 251 aa17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 EFCC1Q9HA90 598 aa17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 SUGT1Q9Y2Z0 365 aa17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 CSADQ9Y600 493 aa17.85■□□□□ 0.45
AC016044.1-201ENST00000560818 ARAP2Q8WZ64 1704 aa17.84■□□□□ 0.45
AC016044.1-201ENST00000560818 CACNB3P54284 484 aa17.84■□□□□ 0.45
AC016044.1-201ENST00000560818 PUM3Q15397 648 aaKnown RBP17.84■□□□□ 0.45
AC016044.1-201ENST00000560818 FKBP1CQ5VVH2 108 aa17.84■□□□□ 0.45
AC016044.1-201ENST00000560818 APOBEC3HQ6NTF7 200 aaKnown RBP17.84■□□□□ 0.45
AC016044.1-201ENST00000560818 FAM83AQ86UY5 434 aa17.84■□□□□ 0.45
AC016044.1-201ENST00000560818 BRCA2P51587 3418 aa17.84■□□□□ 0.45
AC016044.1-201ENST00000560818 CCL15-CCL14A0A0B4J2E2 113 aa17.83■□□□□ 0.44
AC016044.1-201ENST00000560818 SPDYE5A6NIY4 337 aa17.83■□□□□ 0.44
AC016044.1-201ENST00000560818 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
AC016044.1-201ENST00000560818 CAP1Q01518 475 aa17.83■□□□□ 0.44
AC016044.1-201ENST00000560818 CCL15Q16663 113 aa17.83■□□□□ 0.44
AC016044.1-201ENST00000560818 ARMC5Q96C12 935 aa17.83■□□□□ 0.44
AC016044.1-201ENST00000560818 PCDH10Q9P2E7 1040 aa17.83■□□□□ 0.44
AC016044.1-201ENST00000560818 MAST3O60307 1309 aa17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 POTEFA5A3E0 1075 aa17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 EYA2O00167 538 aa17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 RFX5P48382 616 aaPredicted RBP17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 HHIPL2Q6UWX4 724 aa17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 HOOK2Q96ED9 719 aa17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 OTUD5Q96G74 571 aa17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 ZFYVE28Q9HCC9 887 aa17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 TMOD2Q9NZR1 351 aa17.82■□□□□ 0.44
AC016044.1-201ENST00000560818 SLFN5Q08AF3 891 aa17.81■□□□□ 0.44
AC016044.1-201ENST00000560818 TAF1CQ15572 869 aaPredicted RBP17.81■□□□□ 0.44
AC016044.1-201ENST00000560818 FAM43AQ8N2R8 423 aa17.81■□□□□ 0.44
AC016044.1-201ENST00000560818 LPIN2Q92539 896 aa17.81■□□□□ 0.44
AC016044.1-201ENST00000560818 SNCAIPQ9Y6H5 919 aa17.81■□□□□ 0.44
AC016044.1-201ENST00000560818 OTOFQ9HC10 1997 aa17.8■□□□□ 0.44
AC016044.1-201ENST00000560818 ARHGEF6Q15052 776 aa17.8■□□□□ 0.44
AC016044.1-201ENST00000560818 ALDH1L2Q3SY69 923 aa17.8■□□□□ 0.44
AC016044.1-201ENST00000560818 ERO1BQ86YB8 467 aa17.8■□□□□ 0.44
AC016044.1-201ENST00000560818 WDR66Q8TBY9 1149 aa17.8■□□□□ 0.44
AC016044.1-201ENST00000560818 WRNIP1Q96S55 665 aa17.8■□□□□ 0.44
AC016044.1-201ENST00000560818 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
AC016044.1-201ENST00000560818 CETPP11597 493 aa17.79■□□□□ 0.44
AC016044.1-201ENST00000560818 SLC5A1P13866 664 aa17.79■□□□□ 0.44
AC016044.1-201ENST00000560818 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
AC016044.1-201ENST00000560818 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
AC016044.1-201ENST00000560818 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
AC016044.1-201ENST00000560818 WDHD1O75717 1129 aaPredicted RBP17.78■□□□□ 0.44
AC016044.1-201ENST00000560818 PPIL2Q13356 520 aa17.78■□□□□ 0.44
AC016044.1-201ENST00000560818 DCAF15Q66K64 600 aa17.78■□□□□ 0.44
AC016044.1-201ENST00000560818 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
AC016044.1-201ENST00000560818 IRF6O14896 467 aa17.77■□□□□ 0.44
AC016044.1-201ENST00000560818 TLR2O60603 784 aa17.77■□□□□ 0.44
AC016044.1-201ENST00000560818 SNAPC2Q13487 334 aa17.77■□□□□ 0.44
AC016044.1-201ENST00000560818 FAM151AQ8WW52 585 aa17.77■□□□□ 0.44
AC016044.1-201ENST00000560818 ZNF333Q96JL9 665 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms