RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 PHF14O94880 888 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 MBD4O95243 580 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 APPP05067 770 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 GYG1P46976 350 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 HAND2P61296 217 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 APOBRQ0VD83 1088 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 VPS37DQ86XT2 251 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 LRRC2Q9BYS8 371 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 TAF1P21675 1872 aa29.56■■■□□ 2.32
SHF-208ENST00000560734 VPS37CA5D8V6 355 aaPredicted RBP29.56■■■□□ 2.32
SHF-208ENST00000560734 USP48Q86UV5 1035 aa29.56■■■□□ 2.32
SHF-208ENST00000560734 IFNL3Q8IZI9 196 aa29.56■■■□□ 2.32
SHF-208ENST00000560734 RGS22Q8NE09 1264 aa29.56■■■□□ 2.32
SHF-208ENST00000560734 TNRC6CQ9HCJ0 1690 aaKnown RBP29.55■■■□□ 2.32
SHF-208ENST00000560734 GRAPQ13588 217 aa29.55■■■□□ 2.32
SHF-208ENST00000560734 NSUN7Q8NE18 718 aaKnown RBP29.55■■■□□ 2.32
SHF-208ENST00000560734 GRAPLQ8TC17 118 aaPredicted RBP29.55■■■□□ 2.32
SHF-208ENST00000560734 SYAP1Q96A49 352 aaPredicted RBP29.55■■■□□ 2.32
SHF-208ENST00000560734 NBPF3Q9H094 633 aa29.55■■■□□ 2.32
SHF-208ENST00000560734 TIAM2Q8IVF5 1701 aa29.54■■■□□ 2.32
SHF-208ENST00000560734 DHX16O60231 1041 aaKnown RBP29.54■■■□□ 2.32
SHF-208ENST00000560734 GYS1P13807 737 aa29.54■■■□□ 2.32
SHF-208ENST00000560734 CAVIN1Q6NZI2 390 aaKnown RBP29.54■■■□□ 2.32
SHF-208ENST00000560734 CHAMP1Q96JM3 812 aa29.54■■■□□ 2.32
SHF-208ENST00000560734 GSG1L2A8MUP6 293 aa29.54■■■□□ 2.32
SHF-208ENST00000560734 NPHP1O15259 732 aa29.54■■■□□ 2.32
SHF-208ENST00000560734 ZSCAN23Q3MJ62 389 aa29.54■■■□□ 2.32
SHF-208ENST00000560734 NAPBQ9H115 298 aa29.54■■■□□ 2.32
SHF-208ENST00000560734 CNNM2Q9H8M5 875 aa29.54■■■□□ 2.32
SHF-208ENST00000560734 SALL1Q9NSC2 1324 aa29.53■■■□□ 2.32
SHF-208ENST00000560734 NAA16Q6N069 864 aaPredicted RBP29.53■■■□□ 2.32
SHF-208ENST00000560734 TMEM87BQ96K49 555 aa29.53■■■□□ 2.32
SHF-208ENST00000560734 MTA3Q9BTC8 594 aa29.53■■■□□ 2.32
SHF-208ENST00000560734 GRPEL1Q9HAV7 217 aa29.53■■■□□ 2.32
SHF-208ENST00000560734 LEMD3Q9Y2U8 911 aa29.53■■■□□ 2.32
SHF-208ENST00000560734 COL1A1P02452 1464 aaPredicted RBP29.52■■■□□ 2.32
SHF-208ENST00000560734 HIBADHP31937 336 aaKnown RBP29.52■■■□□ 2.32
SHF-208ENST00000560734 ANTXR2P58335 489 aa29.52■■■□□ 2.32
SHF-208ENST00000560734 UBE2HP62256 183 aa29.52■■■□□ 2.32
SHF-208ENST00000560734 CRY2Q49AN0 593 aa29.52■■■□□ 2.32
SHF-208ENST00000560734 ZSCAN16Q9H4T2 348 aaPredicted RBP29.52■■■□□ 2.32
SHF-208ENST00000560734 IRS2Q9Y4H2 1338 aa29.52■■■□□ 2.32
SHF-208ENST00000560734 PRR5LQ6MZQ0 368 aa29.51■■■□□ 2.32
SHF-208ENST00000560734 TBC1D10CQ8IV04 446 aa29.51■■■□□ 2.32
SHF-208ENST00000560734 FAM184AQ8NB25 1140 aa29.51■■■□□ 2.32
SHF-208ENST00000560734 ARMT1Q9H993 441 aa29.51■■■□□ 2.32
SHF-208ENST00000560734 CNPY2Q9Y2B0 182 aa29.51■■■□□ 2.32
SHF-208ENST00000560734 TRIM37O94972 964 aa29.51■■■□□ 2.31
SHF-208ENST00000560734 C15orf52Q6ZUT6 534 aaKnown RBP29.51■■■□□ 2.31
SHF-208ENST00000560734 CDC37L1Q7L3B6 337 aa29.51■■■□□ 2.31
SHF-208ENST00000560734 EPB41L4AQ9HCS5 686 aaPredicted RBP29.51■■■□□ 2.31
SHF-208ENST00000560734 ELP1O95163 1332 aa29.5■■■□□ 2.31
SHF-208ENST00000560734 JAK2O60674 1132 aa29.5■■■□□ 2.31
SHF-208ENST00000560734 CTDNEP1O95476 244 aa29.5■■■□□ 2.31
SHF-208ENST00000560734 CYP7A1P22680 504 aa29.5■■■□□ 2.31
SHF-208ENST00000560734 ST5P78524 1137 aa29.5■■■□□ 2.31
SHF-208ENST00000560734 KRT85P78386 507 aa29.49■■■□□ 2.31
SHF-208ENST00000560734 LCORLQ8N3X6 602 aa29.49■■■□□ 2.31
SHF-208ENST00000560734 KRT23Q9C075 422 aa29.49■■■□□ 2.31
SHF-208ENST00000560734 RAI14Q9P0K7 980 aa29.49■■■□□ 2.31
SHF-208ENST00000560734 ANGEL1Q9UNK9 670 aaKnown RBP29.49■■■□□ 2.31
SHF-208ENST00000560734 PLSCR1O15162 318 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 SLC4A4Q9Y6R1 1079 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 CACNA1SQ13698 1873 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 PTPDC1A2A3K4 754 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 TXNRD1Q16881 649 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 GIMAP6Q6P9H5 292 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 CHST3Q7LGC8 479 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 FAM43AQ8N2R8 423 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 STAG1Q8WVM7 1258 aa29.48■■■□□ 2.31
SHF-208ENST00000560734 MAGEB6P1A0A0J9YX57 407 aa29.47■■■□□ 2.31
SHF-208ENST00000560734 DNM1Q05193 864 aaKnown RBP29.47■■■□□ 2.31
SHF-208ENST00000560734 AKNAD1Q5T1N1 836 aa29.47■■■□□ 2.31
SHF-208ENST00000560734 GAS2L3Q86XJ1 694 aa29.47■■■□□ 2.31
SHF-208ENST00000560734 SCAND2PQ9GZW5 306 aaPredicted RBP29.47■■■□□ 2.31
SHF-208ENST00000560734 TMEM63CQ9P1W3 806 aa29.47■■■□□ 2.31
SHF-208ENST00000560734 ABCF2Q9UG63 623 aa29.47■■■□□ 2.31
SHF-208ENST00000560734 ANAPC4Q9UJX5 808 aa29.47■■■□□ 2.31
SHF-208ENST00000560734 SERPINB2P05120 415 aa29.46■■■□□ 2.31
SHF-208ENST00000560734 RIOK1Q9BRS2 568 aaKnown RBP29.46■■■□□ 2.31
SHF-208ENST00000560734 RNF41Q9H4P4 317 aaPredicted RBP29.46■■■□□ 2.31
SHF-208ENST00000560734 TCHHQ07283 1943 aa29.46■■■□□ 2.31
SHF-208ENST00000560734 XDHP47989 1333 aa29.46■■■□□ 2.31
SHF-208ENST00000560734 KLRG2A4D1S0 409 aaPredicted RBP29.45■■■□□ 2.31
SHF-208ENST00000560734 WTIPA6NIX2 430 aaPredicted RBP29.45■■■□□ 2.31
SHF-208ENST00000560734 SH2B2O14492 632 aaPredicted RBP29.45■■■□□ 2.31
SHF-208ENST00000560734 LIFRP42702 1097 aa29.45■■■□□ 2.31
SHF-208ENST00000560734 IQSEC3Q9UPP2 1182 aaPredicted RBP29.45■■■□□ 2.31
SHF-208ENST00000560734 KLF18A0A0U1RQI7 1052 aa29.45■■■□□ 2.3
SHF-208ENST00000560734 H3BQV1 296 aa29.45■■■□□ 2.3
SHF-208ENST00000560734 HOXA10P31260 410 aaPredicted RBP29.45■■■□□ 2.3
SHF-208ENST00000560734 FOXD4L6Q3SYB3 417 aaPredicted RBP29.45■■■□□ 2.3
SHF-208ENST00000560734 IFFO2Q5TF58 517 aa29.45■■■□□ 2.3
SHF-208ENST00000560734 SPTY2D1Q68D10 685 aaPredicted RBP29.45■■■□□ 2.3
SHF-208ENST00000560734 FOXD4L3Q6VB84 417 aaPredicted RBP29.45■■■□□ 2.3
SHF-208ENST00000560734 SGMS1Q86VZ5 419 aa29.45■■■□□ 2.3
SHF-208ENST00000560734 CCDC24Q8N4L8 307 aa29.45■■■□□ 2.3
SHF-208ENST00000560734 RPGRQ92834 1020 aaKnown RBP29.45■■■□□ 2.3
SHF-208ENST00000560734 BRIP1Q9BX63 1249 aa29.45■■■□□ 2.3
SHF-208ENST00000560734 GDPD2Q9HCC8 539 aa29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms