RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 NECTIN1Q15223 517 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 OLFM4Q6UX06 510 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 SLC51AQ86UW1 340 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 KCNB2Q92953 911 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 AIDAQ96BJ3 306 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 KIF2CQ99661 725 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 PUS7LQ9H0K6 701 aaKnown RBP10.31□□□□□ -0.76
TRAF3-209ENST00000560463 SUGT1Q9Y2Z0 365 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 RBM8AQ9Y5S9 174 aaKnown RBP10.31□□□□□ -0.76
TRAF3-209ENST00000560463 ZMYM6O95789 1325 aa10.31□□□□□ -0.76
TRAF3-209ENST00000560463 TIAM2Q8IVF5 1701 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 ADAMTSL1Q8N6G6 1762 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 M0R2C6 588 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 RIMBP2O15034 1052 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 GPAA1O43292 621 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 C21orf2O43822 256 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 HSPD1P10809 573 aaKnown RBP10.3□□□□□ -0.76
TRAF3-209ENST00000560463 GSTO1P78417 241 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 KIAA2012Q0VF49 1180 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 DALRD3Q5D0E6 543 aaKnown RBP10.3□□□□□ -0.76
TRAF3-209ENST00000560463 NAA16Q6N069 864 aaPredicted RBP10.3□□□□□ -0.76
TRAF3-209ENST00000560463 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 CERS3Q8IU89 383 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 NSUN4Q96CB9 384 aaKnown RBP10.3□□□□□ -0.76
TRAF3-209ENST00000560463 GPR101Q96P66 508 aaPredicted RBP10.3□□□□□ -0.76
TRAF3-209ENST00000560463 CTNNA3Q9UI47 895 aa10.3□□□□□ -0.76
TRAF3-209ENST00000560463 DDX60LQ5H9U9 1706 aaKnown RBP10.3□□□□□ -0.76
TRAF3-209ENST00000560463 CHGBP05060 677 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 LDHCP07864 332 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 CYP7A1P22680 504 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 FKBP1AP62942 108 aaKnown RBP10.29□□□□□ -0.76
TRAF3-209ENST00000560463 MECOMQ03112 1051 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 KRT32Q14532 448 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 CCDC129Q6ZRS4 1044 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 SLF2Q8IX21 1173 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 SNX21Q969T3 373 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
TRAF3-209ENST00000560463 TM6SF1Q9BZW5 370 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
TRAF3-209ENST00000560463 SNX14Q9Y5W7 946 aa10.29□□□□□ -0.76
TRAF3-209ENST00000560463 MAGEB6P1A0A0J9YX57 407 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 PATL2C9JE40 543 aaKnown RBP10.28□□□□□ -0.76
TRAF3-209ENST00000560463 ST18O60284 1047 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 PSMA5P28066 241 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 ALX1Q15699 326 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 SLFNL1Q499Z3 407 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 MFSD14BQ5SR56 506 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 CREB3L3Q68CJ9 461 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 TTLL5Q6EMB2 1281 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 DZIP1Q86YF9 867 aaKnown RBP10.28□□□□□ -0.76
TRAF3-209ENST00000560463 PPP1R1BQ9UD71 204 aaPredicted RBP10.28□□□□□ -0.76
TRAF3-209ENST00000560463 DAXXQ9UER7 740 aaPredicted RBP10.28□□□□□ -0.76
TRAF3-209ENST00000560463 PALD1Q9ULE6 856 aa10.28□□□□□ -0.76
TRAF3-209ENST00000560463 GOLGB1Q14789 3259 aaKnown RBP10.28□□□□□ -0.76
TRAF3-209ENST00000560463 SLC27A2O14975 620 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 PPIP5K2O43314 1243 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 ECE2O60344 883 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 MBD4O95243 580 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 PRDX5P30044 214 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 GTF2IP78347 998 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 IMMTQ16891 758 aaKnown RBP10.27□□□□□ -0.77
TRAF3-209ENST00000560463 STRIP1Q5VSL9 837 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
TRAF3-209ENST00000560463 NOL10Q9BSC4 688 aaKnown RBP10.27□□□□□ -0.77
TRAF3-209ENST00000560463 NACAP1Q9BZK3 213 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 LTBP3Q9NS15 1303 aa10.27□□□□□ -0.77
TRAF3-209ENST00000560463 BAG3O95817 575 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 FGAP02671 866 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 APPP05067 770 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 HMGB1P09429 215 aaKnown RBP10.26□□□□□ -0.77
TRAF3-209ENST00000560463 MCM2P49736 904 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 PPP4CP60510 307 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 AOC3Q16853 763 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 VPS53Q5VIR6 699 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 GIMAP6Q6P9H5 292 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 HSCBQ8IWL3 235 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 RASEFQ8IZ41 740 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 KLHL34Q8N239 644 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 ZNF384Q8TF68 577 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 RIOK1Q9BRS2 568 aaKnown RBP10.26□□□□□ -0.77
TRAF3-209ENST00000560463 MRIQ9BWK5 157 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 ARMT1Q9H993 441 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 DBNDD1Q9H9R9 158 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 MYH4Q9Y623 1939 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 POLR2AP24928 1970 aaKnown RBP10.26□□□□□ -0.77
TRAF3-209ENST00000560463 MROH7-TTC4A0A0A0MT08 1334 aa10.26□□□□□ -0.77
TRAF3-209ENST00000560463 USP17L3A6NCW0 530 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 USP17L4A6NCW7 530 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 GSG1L2A8MUP6 293 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 ZNF213O14771 459 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 FOXP2O15409 715 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 CYP21A2P08686 494 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 PLCG2P16885 1265 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 IARSP41252 1262 aaKnown RBP10.25□□□□□ -0.77
TRAF3-209ENST00000560463 NEK4P51957 841 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 RUFY3Q7L099 469 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 USP17L1Q7RTZ2 530 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms