RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 FMNL2Q96PY5 1086 aa8.79□□□□□ -1
HERC1-208ENST00000560462 DDX60Q8IY21 1712 aaKnown RBP8.78□□□□□ -1
HERC1-208ENST00000560462 WNT10BO00744 389 aa8.78□□□□□ -1
HERC1-208ENST00000560462 RGS20O76081 388 aa8.78□□□□□ -1
HERC1-208ENST00000560462 AKNAD1Q5T1N1 836 aa8.78□□□□□ -1
HERC1-208ENST00000560462 OPTNQ96CV9 577 aa8.78□□□□□ -1
HERC1-208ENST00000560462 GMLQ99445 158 aa8.78□□□□□ -1
HERC1-208ENST00000560462 EYA3Q99504 573 aa8.78□□□□□ -1
HERC1-208ENST00000560462 KCNH6Q9H252 994 aa8.78□□□□□ -1
HERC1-208ENST00000560462 EMILIN3Q9NT22 766 aa8.78□□□□□ -1
HERC1-208ENST00000560462 NSFL1CQ9UNZ2 370 aaKnown RBP8.78□□□□□ -1
HERC1-208ENST00000560462 EPG5Q9HCE0 2579 aa8.77□□□□□ -1
HERC1-208ENST00000560462 G3V3G9 751 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 ADCY3O60266 1144 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 ITGB8P26012 769 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 IREB2P48200 963 aaKnown RBP8.77□□□□□ -1.01
HERC1-208ENST00000560462 GTF2A2P52657 109 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 KCTD2Q14681 263 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 SHHQ15465 462 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 ERMP1Q7Z2K6 904 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 ANKRD13AQ8IZ07 590 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 UIMC1Q96RL1 719 aa8.77□□□□□ -1.01
HERC1-208ENST00000560462 GAS2L1Q99501 681 aaPredicted RBP8.77□□□□□ -1.01
HERC1-208ENST00000560462 ELNP15502 786 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 FLIIQ13045 1269 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 GRAPQ13588 217 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 PDE3AQ14432 1141 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 CCDC85BQ15834 202 aaPredicted RBP8.76□□□□□ -1.01
HERC1-208ENST00000560462 AMHR2Q16671 573 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 AAK1Q2M2I8 961 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 SUSD4Q5VX71 490 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 SULT6B1Q6IMI4 303 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 C17orf99Q6UX52 265 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 ZBTB38Q8NAP3 1195 aaPredicted RBP8.76□□□□□ -1.01
HERC1-208ENST00000560462 GRAPLQ8TC17 118 aaPredicted RBP8.76□□□□□ -1.01
HERC1-208ENST00000560462 FAM117AQ9C073 453 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 ELP3Q9H9T3 547 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 ZCCHC17Q9NP64 241 aaKnown RBP8.76□□□□□ -1.01
HERC1-208ENST00000560462 CXXC1Q9P0U4 656 aaPredicted RBP8.76□□□□□ -1.01
HERC1-208ENST00000560462 POLLQ9UGP5 575 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 USP16Q9Y5T5 823 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 SPTBN4Q9H254 2564 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 KMT2BQ9UMN6 2715 aaPredicted RBP8.76□□□□□ -1.01
HERC1-208ENST00000560462 UBN2Q6ZU65 1347 aa8.76□□□□□ -1.01
HERC1-208ENST00000560462 COL1A1P02452 1464 aaPredicted RBP8.76□□□□□ -1.01
HERC1-208ENST00000560462 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
HERC1-208ENST00000560462 C19orf67A6NJJ6 358 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 SASH1O94885 1247 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 NTSR2O95665 410 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 GPTP24298 496 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 FOXK1P85037 733 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 C9orf50Q5SZB4 431 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 DDX46Q7L014 1031 aaKnown RBP8.75□□□□□ -1.01
HERC1-208ENST00000560462 OGFOD1Q8N543 542 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 PXYLP1Q8TE99 480 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 KHSRPQ92945 711 aaKnown RBP eCLIP8.75□□□□□ -1.012e-7■□□□□ 10.2
HERC1-208ENST00000560462 ZC3H12CQ9C0D7 883 aaKnown RBP8.75□□□□□ -1.01
HERC1-208ENST00000560462 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.75□□□□□ -1.012e-6■■□□□ 13.3
HERC1-208ENST00000560462 DEFB129Q9H1M3 183 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 CPA4Q9UI42 421 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 PFASO15067 1338 aa8.75□□□□□ -1.01
HERC1-208ENST00000560462 SCN9AQ15858 1988 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 PI4K2BG5E9Z4 385 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 FCGRTP55899 365 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 DSG2Q14126 1118 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 PODNQ7Z5L7 613 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 L3MBTL2Q969R5 705 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 GABRQQ9UN88 632 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 ATRXP46100 2492 aa8.74□□□□□ -1.01
HERC1-208ENST00000560462 COL3A1P02461 1466 aaPredicted RBP8.73□□□□□ -1.01
HERC1-208ENST00000560462 IRF6O14896 467 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 CD44P16070 742 aaKnown RBP8.73□□□□□ -1.01
HERC1-208ENST00000560462 KCNQ1P51787 676 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 TFF2Q03403 129 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 TEFQ10587 303 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 LRRC26Q2I0M4 334 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 SUPT20HL1Q3ZLR7 823 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 NBPF10Q6P3W6 841 aaKnown RBP8.73□□□□□ -1.01
HERC1-208ENST00000560462 PHF12Q96QT6 1004 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 CARD11Q9BXL7 1154 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 ZNF576Q9H609 170 aa8.73□□□□□ -1.01
HERC1-208ENST00000560462 DDX60LQ5H9U9 1706 aaKnown RBP8.73□□□□□ -1.01
HERC1-208ENST00000560462 TCF20Q9UGU0 1960 aaKnown RBP8.73□□□□□ -1.01
HERC1-208ENST00000560462 DNAH12Q6ZR08 3092 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 LRRC37AA6NMS7 1700 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 ERVV-1B6SEH8 477 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 BTBD19C9JJ37 291 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 USP2O75604 605 aaPredicted RBP8.72□□□□□ -1.01
HERC1-208ENST00000560462 CETPP11597 493 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 TIE1P35590 1138 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 GPSM2P81274 684 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 SLC10A5Q5PT55 438 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 PPP1R42Q7Z4L9 355 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 PRKAG2Q9UGJ0 569 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 PPP2R3BQ9Y5P8 575 aa8.72□□□□□ -1.01
HERC1-208ENST00000560462 USP17L3A6NCW0 530 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms