RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
SMAD3-215ENST00000560424 ZSWIM8A7E2V4 1837 aa11.85□□□□□ -0.51
SMAD3-215ENST00000560424 SPDYE5A6NIY4 337 aa11.84□□□□□ -0.51
SMAD3-215ENST00000560424 TCP10L2B9ZVM9 353 aa11.84□□□□□ -0.51
SMAD3-215ENST00000560424 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
SMAD3-215ENST00000560424 FKBP1AP62942 108 aaKnown RBP11.84□□□□□ -0.51
SMAD3-215ENST00000560424 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
SMAD3-215ENST00000560424 DEFB123Q8N688 67 aa11.84□□□□□ -0.51
SMAD3-215ENST00000560424 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMAD3-215ENST00000560424 U2AF1L4Q8WU68 220 aaKnown RBP11.84□□□□□ -0.51
SMAD3-215ENST00000560424 TDRD3Q9H7E2 651 aaKnown RBP11.84□□□□□ -0.51
SMAD3-215ENST00000560424 ZNF70Q9UC06 446 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-215ENST00000560424 STAP2Q9UGK3 403 aa11.84□□□□□ -0.51
SMAD3-215ENST00000560424 CPA4Q9UI42 421 aa11.84□□□□□ -0.51
SMAD3-215ENST00000560424 JAG2Q9Y219 1238 aa11.84□□□□□ -0.51
SMAD3-215ENST00000560424 COL6A3P12111 3177 aa11.83□□□□□ -0.51
SMAD3-215ENST00000560424 OSBPP22059 807 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 CCDC30Q5VVM6 783 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 GPR153Q6NV75 609 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 ERO1BQ86YB8 467 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 SLAIN1Q8ND83 568 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 HOOK2Q96ED9 719 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 WRNIP1Q96S55 665 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 TMEM39BQ9GZU3 492 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 TTF2Q9UNY4 1162 aaKnown RBP11.83□□□□□ -0.52
SMAD3-215ENST00000560424 CUL9Q8IWT3 2517 aa11.83□□□□□ -0.52
SMAD3-215ENST00000560424 ANKRD18BA2A2Z9 1011 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 TAF5LO75529 589 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 TFRCP02786 760 aaKnown RBP11.82□□□□□ -0.52
SMAD3-215ENST00000560424 IL1R1P14778 569 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 CAPN2P17655 700 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 FCGRTP55899 365 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 KSR2Q6VAB6 950 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 UBE2Q1Q7Z7E8 422 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 RUNDC1Q96C34 613 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 YTHDC1Q96MU7 727 aaKnown RBP11.82□□□□□ -0.52
SMAD3-215ENST00000560424 TMOD2Q9NZR1 351 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 SERPINA10Q9UK55 444 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 STXBP5LQ9Y2K9 1186 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 AOX1Q06278 1338 aa11.82□□□□□ -0.52
SMAD3-215ENST00000560424 PI4KAP2A4QPH2 592 aa11.81□□□□□ -0.52
SMAD3-215ENST00000560424 IRF6O14896 467 aa11.81□□□□□ -0.52
SMAD3-215ENST00000560424 SGPL1O95470 568 aa11.81□□□□□ -0.52
SMAD3-215ENST00000560424 PPIL2Q13356 520 aa11.81□□□□□ -0.52
SMAD3-215ENST00000560424 WDR43Q15061 677 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMAD3-215ENST00000560424 MFSD14BQ5SR56 506 aa11.81□□□□□ -0.52
SMAD3-215ENST00000560424 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
SMAD3-215ENST00000560424 PI4KAP1Q8N8J0 262 aa11.81□□□□□ -0.52
SMAD3-215ENST00000560424 TEPSINQ96N21 525 aa11.81□□□□□ -0.52
SMAD3-215ENST00000560424 LAMA3Q16787 3333 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 PDHXO00330 501 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 IGKV5-2P06315 115 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 PRKCZQ05513 592 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 CALD1Q05682 793 aaKnown RBP11.8□□□□□ -0.52
SMAD3-215ENST00000560424 CWF19L2Q2TBE0 894 aaKnown RBP11.8□□□□□ -0.52
SMAD3-215ENST00000560424 C15orf52Q6ZUT6 534 aaKnown RBP11.8□□□□□ -0.52
SMAD3-215ENST00000560424 CDAN1Q8IWY9 1227 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
SMAD3-215ENST00000560424 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 COL25A1Q9BXS0 654 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-215ENST00000560424 STK31Q9BXU1 1019 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 CHMP3Q9Y3E7 222 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 ZBED9Q6R2W3 1325 aa11.8□□□□□ -0.52
SMAD3-215ENST00000560424 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 SNAP23O00161 211 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 PLIN1O60240 522 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 CRKP46108 304 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 GNAI1P63096 354 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 DCAF15Q66K64 600 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 Q7L0L9 218 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 ANKRD23Q86SG2 305 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-215ENST00000560424 ZKSCAN4Q969J2 545 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-215ENST00000560424 PARK7Q99497 189 aaKnown RBP11.79□□□□□ -0.52
SMAD3-215ENST00000560424 ARAP2Q8WZ64 1704 aa11.79□□□□□ -0.52
SMAD3-215ENST00000560424 A0A0C4DFX4 3053 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 H7C1W4 665 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 ADCY3O60266 1144 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 CTGFP29279 349 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 PPATQ06203 517 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 IFIT5Q13325 482 aaKnown RBP11.78□□□□□ -0.52
SMAD3-215ENST00000560424 NECAB2Q7Z6G3 386 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMAD3-215ENST00000560424 C7orf61Q8IZ16 206 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 DEFB118Q96PH6 123 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 PLA2G12BQ9BX93 195 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 IFT57Q9NWB7 429 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
SMAD3-215ENST00000560424 INHAP05111 366 aa11.77□□□□□ -0.53
SMAD3-215ENST00000560424 BMP8BP34820 402 aa11.77□□□□□ -0.53
SMAD3-215ENST00000560424 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMAD3-215ENST00000560424 ZNF341Q9BYN7 854 aa11.77□□□□□ -0.53
SMAD3-215ENST00000560424 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms