RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
PDE8A-212ENST00000560333 ASAP1Q9ULH1 1129 aa13.26□□□□□ -0.29
PDE8A-212ENST00000560333 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
PDE8A-212ENST00000560333 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
PDE8A-212ENST00000560333 TRMT2AQ8IZ69 625 aaKnown RBP13.25□□□□□ -0.29
PDE8A-212ENST00000560333 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
PDE8A-212ENST00000560333 TTLL6Q8N841 843 aa13.25□□□□□ -0.29
PDE8A-212ENST00000560333 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
PDE8A-212ENST00000560333 TMPRSS4Q9NRS4 437 aa13.25□□□□□ -0.29
PDE8A-212ENST00000560333 DICER1Q9UPY3 1922 aaKnown RBP13.25□□□□□ -0.29
PDE8A-212ENST00000560333 CYP27B1O15528 508 aa13.24□□□□□ -0.29
PDE8A-212ENST00000560333 CTSOP43234 321 aaPredicted RBP13.24□□□□□ -0.29
PDE8A-212ENST00000560333 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDE8A-212ENST00000560333 FMR1Q06787 632 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDE8A-212ENST00000560333 MTHFSDQ2M296 383 aaKnown RBP13.24□□□□□ -0.29
PDE8A-212ENST00000560333 INSM2Q96T92 566 aaPredicted RBP13.24□□□□□ -0.29
PDE8A-212ENST00000560333 DLEC1Q9Y238 1755 aa13.24□□□□□ -0.29
PDE8A-212ENST00000560333 ERVH48-1M5A8F1 160 aa13.23□□□□□ -0.29
PDE8A-212ENST00000560333 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
PDE8A-212ENST00000560333 TRIM34Q9BYJ4 488 aa13.23□□□□□ -0.29
PDE8A-212ENST00000560333 ZNF395Q9H8N7 513 aaPredicted RBP13.23□□□□□ -0.29
PDE8A-212ENST00000560333 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
PDE8A-212ENST00000560333 ADAMTS7Q9UKP4 1686 aa13.23□□□□□ -0.29
PDE8A-212ENST00000560333 SCN4AP35499 1836 aa13.23□□□□□ -0.29
PDE8A-212ENST00000560333 ADAMTSL1Q8N6G6 1762 aa13.22□□□□□ -0.29
PDE8A-212ENST00000560333 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
PDE8A-212ENST00000560333 CA12O43570 354 aa13.22□□□□□ -0.29
PDE8A-212ENST00000560333 RIPK4P57078 832 aa13.22□□□□□ -0.29
PDE8A-212ENST00000560333 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
PDE8A-212ENST00000560333 POLMQ9NP87 494 aaPredicted RBP13.22□□□□□ -0.29
PDE8A-212ENST00000560333 MAPK8IP3Q9UPT6 1336 aa13.21□□□□□ -0.29
PDE8A-212ENST00000560333 ESPNB1AK53 854 aa13.21□□□□□ -0.29
PDE8A-212ENST00000560333 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
PDE8A-212ENST00000560333 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.29
PDE8A-212ENST00000560333 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
PDE8A-212ENST00000560333 NANOS1Q8WY41 292 aaKnown RBP13.21□□□□□ -0.29
PDE8A-212ENST00000560333 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
PDE8A-212ENST00000560333 SLC35F4A4IF30 521 aa13.2□□□□□ -0.3
PDE8A-212ENST00000560333 C21orf2O43822 256 aa13.2□□□□□ -0.3
PDE8A-212ENST00000560333 ADH1AP07327 375 aa13.2□□□□□ -0.3
PDE8A-212ENST00000560333 EPHX2P34913 555 aa13.2□□□□□ -0.3
PDE8A-212ENST00000560333 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
PDE8A-212ENST00000560333 WDR63Q8IWG1 891 aa13.2□□□□□ -0.3
PDE8A-212ENST00000560333 HACL1Q9UJ83 578 aa13.2□□□□□ -0.3
PDE8A-212ENST00000560333 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
PDE8A-212ENST00000560333 LILRA1O75019 489 aa13.19□□□□□ -0.3
PDE8A-212ENST00000560333 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
PDE8A-212ENST00000560333 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
PDE8A-212ENST00000560333 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
PDE8A-212ENST00000560333 SLC17A8Q8NDX2 589 aa13.19□□□□□ -0.3
PDE8A-212ENST00000560333 SIPA1L3O60292 1781 aaPredicted RBP13.19□□□□□ -0.3
PDE8A-212ENST00000560333 RNF123Q5XPI4 1314 aa13.18□□□□□ -0.3
PDE8A-212ENST00000560333 CNTNAP4Q9C0A0 1308 aa13.18□□□□□ -0.3
PDE8A-212ENST00000560333 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
PDE8A-212ENST00000560333 SCN11AQ9UI33 1791 aa13.18□□□□□ -0.3
PDE8A-212ENST00000560333 CENPBP07199 599 aaPredicted RBP13.18□□□□□ -0.3
PDE8A-212ENST00000560333 MAP2K2P36507 400 aa13.18□□□□□ -0.3
PDE8A-212ENST00000560333 PTGIRP43119 386 aa13.18□□□□□ -0.3
PDE8A-212ENST00000560333 CIAPIN1Q6FI81 312 aa13.18□□□□□ -0.3
PDE8A-212ENST00000560333 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
PDE8A-212ENST00000560333 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
PDE8A-212ENST00000560333 IL16Q14005 1332 aa13.17□□□□□ -0.3
PDE8A-212ENST00000560333 ZNF853P0CG23 659 aa13.17□□□□□ -0.3
PDE8A-212ENST00000560333 GAS2L2Q8NHY3 880 aa13.17□□□□□ -0.3
PDE8A-212ENST00000560333 CNTNAP3BQ96NU0 1288 aa13.17□□□□□ -0.3
PDE8A-212ENST00000560333 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
PDE8A-212ENST00000560333 THUMPD2Q9BTF0 503 aaKnown RBP13.17□□□□□ -0.3
PDE8A-212ENST00000560333 CNTNAP3Q9BZ76 1288 aa13.17□□□□□ -0.3
PDE8A-212ENST00000560333 ATG3Q9NT62 314 aa13.17□□□□□ -0.3
PDE8A-212ENST00000560333 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
PDE8A-212ENST00000560333 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
PDE8A-212ENST00000560333 ZNF541Q9H0D2 1346 aa13.16□□□□□ -0.3
PDE8A-212ENST00000560333 ZBBXA8MT70 800 aa13.16□□□□□ -0.3
PDE8A-212ENST00000560333 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
PDE8A-212ENST00000560333 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
PDE8A-212ENST00000560333 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
PDE8A-212ENST00000560333 IL17REQ8NFR9 667 aa13.16□□□□□ -0.3
PDE8A-212ENST00000560333 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
PDE8A-212ENST00000560333 ZNF622Q969S3 477 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDE8A-212ENST00000560333 MYH14Q7Z406 1995 aaKnown RBP13.15□□□□□ -0.3
PDE8A-212ENST00000560333 TRAF5O00463 557 aa13.15□□□□□ -0.3
PDE8A-212ENST00000560333 ITGA6P23229 1130 aa13.15□□□□□ -0.3
PDE8A-212ENST00000560333 KRT76Q01546 638 aa13.15□□□□□ -0.3
PDE8A-212ENST00000560333 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
PDE8A-212ENST00000560333 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
PDE8A-212ENST00000560333 VWA5B2Q8N398 1253 aa13.15□□□□□ -0.3
PDE8A-212ENST00000560333 COL25A1Q9BXS0 654 aaPredicted RBP13.15□□□□□ -0.3
PDE8A-212ENST00000560333 PCDHB9Q9Y5E1 797 aa13.15□□□□□ -0.3
PDE8A-212ENST00000560333 CEMIPQ8WUJ3 1361 aa13.15□□□□□ -0.3
PDE8A-212ENST00000560333 E9PSI1 815 aa13.14□□□□□ -0.31
PDE8A-212ENST00000560333 H0YIN7 160 aa13.14□□□□□ -0.31
PDE8A-212ENST00000560333 NEFMP07197 916 aa13.14□□□□□ -0.31
PDE8A-212ENST00000560333 PNMA8AQ86V59 439 aaPredicted RBP13.14□□□□□ -0.31
PDE8A-212ENST00000560333 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
PDE8A-212ENST00000560333 AKAP4Q5JQC9 854 aa13.13□□□□□ -0.31
PDE8A-212ENST00000560333 MCM10Q7L590 875 aa13.13□□□□□ -0.31
PDE8A-212ENST00000560333 KDF1Q8NAX2 398 aaPredicted RBP13.13□□□□□ -0.31
PDE8A-212ENST00000560333 LGR6Q9HBX8 967 aa13.13□□□□□ -0.31
PDE8A-212ENST00000560333 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 PHKG2P15735 406 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms