RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
RABGGTA-213ENST00000560127 TDRD3Q9H7E2 651 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-213ENST00000560127 DOCK3Q8IZD9 2030 aa16.41■□□□□ 0.22
RABGGTA-213ENST00000560127 ANKRD18BA2A2Z9 1011 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 GNRH1P01148 92 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 KIF22Q14807 665 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 UBE2Q1Q7Z7E8 422 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 CSADQ9Y600 493 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 ALPK3Q96L96 1907 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 UNC80Q8N2C7 3258 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 FAM205AQ6ZU69 1335 aa16.4■□□□□ 0.22
RABGGTA-213ENST00000560127 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 TCP10L2B9ZVM9 353 aa16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 BTBD19C9JJ37 291 aa16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 APAF1O14727 1248 aa16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 CTGFP29279 349 aa16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 PRMT2P55345 433 aa16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 AK9Q5TCS8 1911 aa16.39■□□□□ 0.21
RABGGTA-213ENST00000560127 DZIP1LQ8IYY4 767 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-213ENST00000560127 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
RABGGTA-213ENST00000560127 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-213ENST00000560127 ECM2O94769 699 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-213ENST00000560127 CETPP11597 493 aa16.37■□□□□ 0.21
RABGGTA-213ENST00000560127 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
RABGGTA-213ENST00000560127 C17orf99Q6UX52 265 aa16.37■□□□□ 0.21
RABGGTA-213ENST00000560127 STK31Q9BXU1 1019 aa16.37■□□□□ 0.21
RABGGTA-213ENST00000560127 IRF6O14896 467 aa16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 GJA8P48165 433 aa16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 FOXO4P98177 505 aa16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 ERO1BQ86YB8 467 aa16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 TDRD7Q8NHU6 1098 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 NKX2-3Q8TAU0 364 aa16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 MYH16Q9H6N6 1097 aa16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 SRRDQ9UH36 339 aa16.36■□□□□ 0.21
RABGGTA-213ENST00000560127 ZBTB7BO15156 539 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-213ENST00000560127 GJB1P08034 283 aa16.35■□□□□ 0.21
RABGGTA-213ENST00000560127 PSMC4P43686 418 aa16.35■□□□□ 0.21
RABGGTA-213ENST00000560127 CRKP46108 304 aa16.35■□□□□ 0.21
RABGGTA-213ENST00000560127 TNNI2P48788 182 aa16.35■□□□□ 0.21
RABGGTA-213ENST00000560127 SNAPC2Q13487 334 aa16.35■□□□□ 0.21
RABGGTA-213ENST00000560127 HTATIP2Q9BUP3 242 aa16.35■□□□□ 0.21
RABGGTA-213ENST00000560127 SOX1O00570 391 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 PLIN1O60240 522 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 CCL5P13501 91 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 OSBPP22059 807 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 GRK4P32298 578 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 PPIL2Q13356 520 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 TSR2Q969E8 191 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 ZKSCAN4Q969J2 545 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 CPA4Q9UI42 421 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 RIPOR2Q9Y4F9 1068 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 NR2E3Q9Y5X4 410 aa16.34■□□□□ 0.21
RABGGTA-213ENST00000560127 CACNB3P54284 484 aa16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 GRIK5Q16478 980 aa16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 RAET1EQ8TD07 263 aa16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 DNAAF4Q8WXU2 420 aa16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 WRNIP1Q96S55 665 aa16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 RNF208Q9H0X6 261 aa16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 CHMP3Q9Y3E7 222 aa16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 ADGRA2Q96PE1 1338 aa16.33■□□□□ 0.2
RABGGTA-213ENST00000560127 LAMA2P24043 3122 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-213ENST00000560127 GYG1P46976 350 aa16.32■□□□□ 0.2
RABGGTA-213ENST00000560127 FLIIQ13045 1269 aa16.32■□□□□ 0.2
RABGGTA-213ENST00000560127 LRCH3Q96II8 777 aa16.32■□□□□ 0.2
RABGGTA-213ENST00000560127 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 A0A1W2PPC1 479 aa16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 FARP2O94887 1054 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 HOXD10P28358 340 aa16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 HIBADHP31937 336 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 TWISTNBQ3B726 338 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 EPHA10Q5JZY3 1008 aa16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 LDHAL6AQ6ZMR3 332 aa16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
RABGGTA-213ENST00000560127 PTPRFP10586 1907 aa16.3■□□□□ 0.2
RABGGTA-213ENST00000560127 FKBP5Q13451 457 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-213ENST00000560127 UBE4AQ14139 1066 aa16.3■□□□□ 0.2
RABGGTA-213ENST00000560127 LMBR1LQ6UX01 489 aa16.3■□□□□ 0.2
RABGGTA-213ENST00000560127 ANKRD23Q86SG2 305 aa16.3■□□□□ 0.2
RABGGTA-213ENST00000560127 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-213ENST00000560127 U2AF1L4Q8WU68 220 aaKnown RBP16.3■□□□□ 0.2
RABGGTA-213ENST00000560127 CNNM1Q9NRU3 951 aa16.3■□□□□ 0.2
RABGGTA-213ENST00000560127 PDHXO00330 501 aa16.29■□□□□ 0.2
RABGGTA-213ENST00000560127 HDLBPQ00341 1268 aaKnown RBP16.29■□□□□ 0.2
RABGGTA-213ENST00000560127 PRKCZQ05513 592 aa16.29■□□□□ 0.2
RABGGTA-213ENST00000560127 PPATQ06203 517 aa16.29■□□□□ 0.2
RABGGTA-213ENST00000560127 UNC93B1Q9H1C4 597 aa16.29■□□□□ 0.2
RABGGTA-213ENST00000560127 BIN2Q9UBW5 565 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-213ENST00000560127 INPP5BP32019 993 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms