RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 CST9Q5W186 159 aa10.5□□□□□ -0.73
USP3-217ENST00000560070 CLASRPQ8N2M8 674 aaKnown RBP10.5□□□□□ -0.73
USP3-217ENST00000560070 SPATA5Q8NB90 893 aa10.5□□□□□ -0.73
USP3-217ENST00000560070 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
USP3-217ENST00000560070 DBNLQ9UJU6 430 aaKnown RBP10.5□□□□□ -0.73
USP3-217ENST00000560070 ABT1Q9ULW3 272 aaKnown RBP10.5□□□□□ -0.73
USP3-217ENST00000560070 NDUFB9Q9Y6M9 179 aa10.5□□□□□ -0.73
USP3-217ENST00000560070 SBF1O95248 1867 aa10.5□□□□□ -0.73
USP3-217ENST00000560070 AOX1Q06278 1338 aa10.5□□□□□ -0.73
USP3-217ENST00000560070 CHD4Q14839 1912 aa10.5□□□□□ -0.73
USP3-217ENST00000560070 LRRC37AA6NMS7 1700 aa10.5□□□□□ -0.73
USP3-217ENST00000560070 CACNA1FO60840 1977 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 SEMA3EO15041 775 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 UQCRFS1P1P0C7P4 283 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 MCAMP43121 646 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 ZAP70P43403 619 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 CACNB3P54284 484 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 GRM1Q13255 1194 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 PRKG1Q13976 671 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 DIXDC1Q155Q3 683 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 PAXIP1Q6ZW49 1069 aaPredicted RBP10.49□□□□□ -0.73
USP3-217ENST00000560070 LRRCC1Q9C099 1032 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 DCTPP1Q9H773 170 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 RAI14Q9P0K7 980 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 ZNF70Q9UC06 446 aaPredicted RBP10.49□□□□□ -0.73
USP3-217ENST00000560070 PASKQ96RG2 1323 aa10.49□□□□□ -0.73
USP3-217ENST00000560070 WDR90Q96KV7 1748 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 TCP10L2B9ZVM9 353 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 MYO1BO43795 1136 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 TEKT1Q969V4 418 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 CDCA5Q96FF9 252 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 ZBED3Q96IU2 234 aaPredicted RBP10.48□□□□□ -0.73
USP3-217ENST00000560070 LRP2BPQ9P2M1 347 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 SERPINA10Q9UK55 444 aa10.48□□□□□ -0.73
USP3-217ENST00000560070 TIAM2Q8IVF5 1701 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 ARID4AP29374 1257 aaPredicted RBP10.47□□□□□ -0.73
USP3-217ENST00000560070 MMP14P50281 582 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 TTLL12Q14166 644 aaPredicted RBP10.47□□□□□ -0.73
USP3-217ENST00000560070 ANKRD45Q5TZF3 282 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 SPTY2D1Q68D10 685 aaPredicted RBP10.47□□□□□ -0.73
USP3-217ENST00000560070 MOB2Q70IA6 237 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 DZIP1Q86YF9 867 aaKnown RBP10.47□□□□□ -0.73
USP3-217ENST00000560070 MTMR14Q8NCE2 650 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 BOLA2Q9H3K6 86 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 CREBZFQ9NS37 354 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 USP40Q9NVE5 1235 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 LTBP1Q14766 1721 aa10.47□□□□□ -0.73
USP3-217ENST00000560070 IGHDP01880 384 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 CYP2E1P05181 493 aaPredicted RBP10.46□□□□□ -0.73
USP3-217ENST00000560070 MECOMQ03112 1051 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 RASA3Q14644 834 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 B4GALNT3Q6L9W6 998 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 APOBEC3HQ6NTF7 200 aaKnown RBP10.46□□□□□ -0.73
USP3-217ENST00000560070 ZGPATQ8N5A5 531 aaKnown RBP10.46□□□□□ -0.73
USP3-217ENST00000560070 C2orf69Q8N8R5 385 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.73
USP3-217ENST00000560070 DEFB129Q9H1M3 183 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 RWDD1Q9H446 243 aaPredicted RBP10.46□□□□□ -0.73
USP3-217ENST00000560070 ANTXR1Q9H6X2 564 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 PIH1D3Q9NQM4 214 aaKnown RBP10.46□□□□□ -0.73
USP3-217ENST00000560070 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
USP3-217ENST00000560070 FZD1Q9UP38 647 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 SUGT1Q9Y2Z0 365 aa10.46□□□□□ -0.73
USP3-217ENST00000560070 ZNF609O15014 1411 aa10.46□□□□□ -0.74
USP3-217ENST00000560070 COL1A1P02452 1464 aaPredicted RBP10.45□□□□□ -0.74
USP3-217ENST00000560070 MAST3O60307 1309 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 UBE2Q2LH0YL09 131 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 IDH1O75874 414 aaKnown RBP10.45□□□□□ -0.74
USP3-217ENST00000560070 HDLBPQ00341 1268 aaKnown RBP10.45□□□□□ -0.74
USP3-217ENST00000560070 DEFB115Q30KQ5 88 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 TSHZ3Q63HK5 1081 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 HHIPL2Q6UWX4 724 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 APOBEC3FQ8IUX4 373 aaKnown RBP10.45□□□□□ -0.74
USP3-217ENST00000560070 DNAJC5GQ8N7S2 189 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 EDC3Q96F86 508 aaKnown RBP10.45□□□□□ -0.74
USP3-217ENST00000560070 ZDHHC15Q96MV8 337 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 MRIQ9BWK5 157 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 GBA2Q9HCG7 927 aaPredicted RBP10.45□□□□□ -0.74
USP3-217ENST00000560070 DAGLAQ9Y4D2 1042 aa10.45□□□□□ -0.74
USP3-217ENST00000560070 SALL1Q9NSC2 1324 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 GOLIM4O00461 696 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 HUNKP57058 714 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 TCP10Q12799 353 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 SPDYE2Q495Y8 402 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 NBPF12Q5TAG4 269 aaPredicted RBP10.44□□□□□ -0.74
USP3-217ENST00000560070 CYP4F22Q6NT55 531 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 CDC42EP5Q6NZY7 148 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 ZNF384Q8TF68 577 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 TMEM39BQ9GZU3 492 aa10.44□□□□□ -0.74
USP3-217ENST00000560070 CCDC88AQ3V6T2 1871 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 PITPNM2Q9BZ72 1349 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 SPEF2Q9C093 1822 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 MAP4K4O95819 1239 aaPredicted RBP10.43□□□□□ -0.74
USP3-217ENST00000560070 LDHCP07864 332 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 CYP7A1P22680 504 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 NF2P35240 595 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms