RNA–Protein interactions for RNA: ENST00000560008.5

MIR9-3HG-208, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-208ENST00000560008 CRKP46108 304 aa21.54■■□□□ 1.04
MIR9-3HG-208ENST00000560008 TMEM57Q8N5G2 664 aa21.54■■□□□ 1.04
MIR9-3HG-208ENST00000560008 PRMT6Q96LA8 375 aaPredicted RBP21.54■■□□□ 1.04
MIR9-3HG-208ENST00000560008 MRIQ9BWK5 157 aa21.54■■□□□ 1.04
MIR9-3HG-208ENST00000560008 PA2G4Q9UQ80 394 aaKnown RBP21.54■■□□□ 1.04
MIR9-3HG-208ENST00000560008 CLRN2A0PK11 232 aa21.53■■□□□ 1.04
MIR9-3HG-208ENST00000560008 PRAMEF18Q5VWM3 479 aa21.53■■□□□ 1.04
MIR9-3HG-208ENST00000560008 ZGPATQ8N5A5 531 aaKnown RBP21.53■■□□□ 1.04
MIR9-3HG-208ENST00000560008 DENND2AQ9ULE3 1009 aa21.53■■□□□ 1.04
MIR9-3HG-208ENST00000560008 FAM155AB1AL88 458 aaPredicted RBP21.52■■□□□ 1.04
MIR9-3HG-208ENST00000560008 G3BP1Q13283 466 aaKnown RBP eCLIP21.52■■□□□ 1.04
MIR9-3HG-208ENST00000560008 SPDYE2Q495Y8 402 aa21.52■■□□□ 1.04
MIR9-3HG-208ENST00000560008 ITPRIPQ8IWB1 547 aa21.52■■□□□ 1.04
MIR9-3HG-208ENST00000560008 UNCXA6NJT0 531 aa21.51■■□□□ 1.03
MIR9-3HG-208ENST00000560008 ZBTB22O15209 634 aa21.51■■□□□ 1.03
MIR9-3HG-208ENST00000560008 KIF23Q02241 960 aaPredicted RBP21.51■■□□□ 1.03
MIR9-3HG-208ENST00000560008 RASAL3Q86YV0 1011 aa21.51■■□□□ 1.03
MIR9-3HG-208ENST00000560008 SAGE1Q9NXZ1 904 aa21.51■■□□□ 1.03
MIR9-3HG-208ENST00000560008 ZNF70Q9UC06 446 aaPredicted RBP21.51■■□□□ 1.03
MIR9-3HG-208ENST00000560008 UBE2Q2LH0YL09 131 aa21.5■■□□□ 1.03
MIR9-3HG-208ENST00000560008 MVPQ14764 893 aaKnown RBP21.5■■□□□ 1.03
MIR9-3HG-208ENST00000560008 TDRD3Q9H7E2 651 aaKnown RBP21.5■■□□□ 1.03
MIR9-3HG-208ENST00000560008 ANGEL1Q9UNK9 670 aaKnown RBP21.5■■□□□ 1.03
MIR9-3HG-208ENST00000560008 AKAP11Q9UKA4 1901 aa21.5■■□□□ 1.03
MIR9-3HG-208ENST00000560008 IREB2P48200 963 aaKnown RBP21.49■■□□□ 1.03
MIR9-3HG-208ENST00000560008 RASA3Q14644 834 aa21.49■■□□□ 1.03
MIR9-3HG-208ENST00000560008 HHIPL2Q6UWX4 724 aa21.49■■□□□ 1.03
MIR9-3HG-208ENST00000560008 HOOK2Q96ED9 719 aa21.49■■□□□ 1.03
MIR9-3HG-208ENST00000560008 ZDHHC15Q96MV8 337 aa21.49■■□□□ 1.03
MIR9-3HG-208ENST00000560008 TNNQ9UQP3 1299 aa21.49■■□□□ 1.03
MIR9-3HG-208ENST00000560008 PCDHAC2Q9Y5I4 1007 aa21.49■■□□□ 1.03
MIR9-3HG-208ENST00000560008 LDHBP07195 334 aaKnown RBP21.48■■□□□ 1.03
MIR9-3HG-208ENST00000560008 MAP3K11Q16584 847 aa21.48■■□□□ 1.03
MIR9-3HG-208ENST00000560008 GORABQ5T7V8 394 aa21.48■■□□□ 1.03
MIR9-3HG-208ENST00000560008 A0A1B0GUL7 405 aa21.47■■□□□ 1.03
MIR9-3HG-208ENST00000560008 SREBF2Q12772 1141 aa21.47■■□□□ 1.03
MIR9-3HG-208ENST00000560008 OS9Q13438 667 aaPredicted RBP21.47■■□□□ 1.03
MIR9-3HG-208ENST00000560008 PRKG1Q13976 671 aa21.47■■□□□ 1.03
MIR9-3HG-208ENST00000560008 CCDC102BQ68D86 513 aa21.47■■□□□ 1.03
MIR9-3HG-208ENST00000560008 MOB2Q70IA6 237 aa21.47■■□□□ 1.03
MIR9-3HG-208ENST00000560008 SLF2Q8IX21 1173 aa21.47■■□□□ 1.03
MIR9-3HG-208ENST00000560008 SALL1Q9NSC2 1324 aa21.47■■□□□ 1.03
MIR9-3HG-208ENST00000560008 TFCP2Q12800 502 aa21.46■■□□□ 1.03
MIR9-3HG-208ENST00000560008 SPTY2D1Q68D10 685 aaPredicted RBP21.46■■□□□ 1.03
MIR9-3HG-208ENST00000560008 SLC10A4Q96EP9 437 aa21.46■■□□□ 1.03
MIR9-3HG-208ENST00000560008 CHMP4BQ9H444 224 aaKnown RBP21.46■■□□□ 1.03
MIR9-3HG-208ENST00000560008 PDS5AQ29RF7 1337 aaKnown RBP21.46■■□□□ 1.03
MIR9-3HG-208ENST00000560008 TCP10L2B9ZVM9 353 aa21.45■■□□□ 1.02
MIR9-3HG-208ENST00000560008 PHKA1P46020 1223 aa21.45■■□□□ 1.02
MIR9-3HG-208ENST00000560008 TIMM10P62072 90 aa21.45■■□□□ 1.02
MIR9-3HG-208ENST00000560008 ATP8B2P98198 1209 aa21.45■■□□□ 1.02
MIR9-3HG-208ENST00000560008 LDLRAD1Q5T700 205 aa21.45■■□□□ 1.02
MIR9-3HG-208ENST00000560008 FKBP1CQ5VVH2 108 aa21.45■■□□□ 1.02
MIR9-3HG-208ENST00000560008 NEUROD6Q96NK8 337 aa21.45■■□□□ 1.02
MIR9-3HG-208ENST00000560008 PNMA6EA0A0J9YXQ4 647 aa21.44■■□□□ 1.02
MIR9-3HG-208ENST00000560008 NBPF12Q5TAG4 269 aaPredicted RBP21.44■■□□□ 1.02
MIR9-3HG-208ENST00000560008 FAM83AQ86UY5 434 aa21.44■■□□□ 1.02
MIR9-3HG-208ENST00000560008 ANKRD13AQ8IZ07 590 aa21.44■■□□□ 1.02
MIR9-3HG-208ENST00000560008 XAGE2Q96GT9 111 aa21.44■■□□□ 1.02
MIR9-3HG-208ENST00000560008 CSRNP1Q96S65 589 aa21.44■■□□□ 1.02
MIR9-3HG-208ENST00000560008 ZIC5Q96T25 663 aa21.44■■□□□ 1.02
MIR9-3HG-208ENST00000560008 ZBTB7BO15156 539 aaPredicted RBP21.43■■□□□ 1.02
MIR9-3HG-208ENST00000560008 GRIK5Q16478 980 aa21.43■■□□□ 1.02
MIR9-3HG-208ENST00000560008 TSKSQ9UJT2 592 aa21.43■■□□□ 1.02
MIR9-3HG-208ENST00000560008 ZBTB48P10074 688 aaPredicted RBP21.42■■□□□ 1.02
MIR9-3HG-208ENST00000560008 ADORA1P30542 326 aa21.42■■□□□ 1.02
MIR9-3HG-208ENST00000560008 INHBEP58166 350 aa21.42■■□□□ 1.02
MIR9-3HG-208ENST00000560008 POLA2Q14181 598 aa21.42■■□□□ 1.02
MIR9-3HG-208ENST00000560008 DZIP1Q86YF9 867 aaKnown RBP21.42■■□□□ 1.02
MIR9-3HG-208ENST00000560008 SSH3Q8TE77 659 aa21.42■■□□□ 1.02
MIR9-3HG-208ENST00000560008 SURF6O75683 361 aaKnown RBP21.41■■□□□ 1.02
MIR9-3HG-208ENST00000560008 TRPA1O75762 1119 aa21.41■■□□□ 1.02
MIR9-3HG-208ENST00000560008 UQCRFS1P1P0C7P4 283 aa21.41■■□□□ 1.02
MIR9-3HG-208ENST00000560008 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.41■■□□□ 1.02
MIR9-3HG-208ENST00000560008 GPR108Q9NPR9 543 aa21.41■■□□□ 1.02
MIR9-3HG-208ENST00000560008 RNF186Q9NXI6 227 aa21.41■■□□□ 1.02
MIR9-3HG-208ENST00000560008 RPAP1Q9BWH6 1393 aaPredicted RBP21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 AOX1Q06278 1338 aa21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 MANSC4A6NHS7 340 aaPredicted RBP21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 RLBP1P12271 317 aa21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 PRDX5P30044 214 aa21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 SPRYD7Q5W111 196 aa21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 DCAF15Q66K64 600 aa21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 APOBEC3HQ6NTF7 200 aaKnown RBP21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 ABCF2Q9UG63 623 aa21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 SSC5DA1L4H1 1573 aa21.4■■□□□ 1.02
MIR9-3HG-208ENST00000560008 ALDH1A1P00352 501 aa21.39■■□□□ 1.01
MIR9-3HG-208ENST00000560008 TM4SF4P48230 202 aa21.39■■□□□ 1.01
MIR9-3HG-208ENST00000560008 RASGRF1Q13972 1273 aa21.39■■□□□ 1.01
MIR9-3HG-208ENST00000560008 CCDC158Q5M9N0 1113 aa21.39■■□□□ 1.01
MIR9-3HG-208ENST00000560008 ERICH6Q7L0X2 663 aa21.39■■□□□ 1.01
MIR9-3HG-208ENST00000560008 TMEM39BQ9GZU3 492 aa21.39■■□□□ 1.01
MIR9-3HG-208ENST00000560008 DDX19BQ9UMR2 479 aa21.39■■□□□ 1.01
MIR9-3HG-208ENST00000560008 CSADQ9Y600 493 aa21.39■■□□□ 1.01
MIR9-3HG-208ENST00000560008 USP2O75604 605 aaPredicted RBP21.38■■□□□ 1.01
MIR9-3HG-208ENST00000560008 HSP90AB4PQ58FF6 505 aa21.38■■□□□ 1.01
MIR9-3HG-208ENST00000560008 OTUD7BQ6GQQ9 843 aa21.38■■□□□ 1.01
MIR9-3HG-208ENST00000560008 ERC1Q8IUD2 1116 aa21.38■■□□□ 1.01
MIR9-3HG-208ENST00000560008 C1orf115Q9H7X2 142 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms