RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 IL15P40933 162 aaPredicted RBP25.49■■□□□ 1.67
CHRNA3-207ENST00000559941 CRKP46108 304 aa25.49■■□□□ 1.67
CHRNA3-207ENST00000559941 HDLBPQ00341 1268 aaKnown RBP25.49■■□□□ 1.67
CHRNA3-207ENST00000559941 SUPT20HL1Q3ZLR7 823 aa25.49■■□□□ 1.67
CHRNA3-207ENST00000559941 FRAT1Q92837 279 aaPredicted RBP25.49■■□□□ 1.67
CHRNA3-207ENST00000559941 COPRSQ9NQ92 184 aa25.49■■□□□ 1.67
CHRNA3-207ENST00000559941 PA2G4Q9UQ80 394 aaKnown RBP25.49■■□□□ 1.67
CHRNA3-207ENST00000559941 TRPA1O75762 1119 aa25.48■■□□□ 1.67
CHRNA3-207ENST00000559941 RASA3Q14644 834 aa25.48■■□□□ 1.67
CHRNA3-207ENST00000559941 MAP3K11Q16584 847 aa25.48■■□□□ 1.67
CHRNA3-207ENST00000559941 ATP2B3Q16720 1220 aa25.48■■□□□ 1.67
CHRNA3-207ENST00000559941 TDRD3Q9H7E2 651 aaKnown RBP25.48■■□□□ 1.67
CHRNA3-207ENST00000559941 TNNQ9UQP3 1299 aa25.48■■□□□ 1.67
CHRNA3-207ENST00000559941 SUGT1Q9Y2Z0 365 aa25.48■■□□□ 1.67
CHRNA3-207ENST00000559941 PPP1R12BO60237 982 aaPredicted RBP25.47■■□□□ 1.67
CHRNA3-207ENST00000559941 TNFAIP1Q13829 316 aa25.47■■□□□ 1.67
CHRNA3-207ENST00000559941 MRIQ9BWK5 157 aa25.47■■□□□ 1.67
CHRNA3-207ENST00000559941 FZD1Q9UP38 647 aa25.47■■□□□ 1.67
CHRNA3-207ENST00000559941 MTX1Q13505 466 aa25.46■■□□□ 1.67
CHRNA3-207ENST00000559941 NBPF12Q5TAG4 269 aaPredicted RBP25.46■■□□□ 1.67
CHRNA3-207ENST00000559941 TEKT1Q969V4 418 aa25.45■■□□□ 1.66
CHRNA3-207ENST00000559941 UNCXA6NJT0 531 aa25.44■■□□□ 1.66
CHRNA3-207ENST00000559941 WDR66Q8TBY9 1149 aa25.44■■□□□ 1.66
CHRNA3-207ENST00000559941 CLUAP1Q96AJ1 413 aa25.44■■□□□ 1.66
CHRNA3-207ENST00000559941 ABHD8Q96I13 439 aa25.44■■□□□ 1.66
CHRNA3-207ENST00000559941 MAST3O60307 1309 aa25.43■■□□□ 1.66
CHRNA3-207ENST00000559941 SRGAP3O43295 1099 aa25.43■■□□□ 1.66
CHRNA3-207ENST00000559941 TM4SF4P48230 202 aa25.43■■□□□ 1.66
CHRNA3-207ENST00000559941 ZKSCAN2Q63HK3 967 aa25.43■■□□□ 1.66
CHRNA3-207ENST00000559941 GNAI2P04899 355 aa25.42■■□□□ 1.66
CHRNA3-207ENST00000559941 SPRYD7Q5W111 196 aa25.42■■□□□ 1.66
CHRNA3-207ENST00000559941 SLC10A4Q96EP9 437 aa25.42■■□□□ 1.66
CHRNA3-207ENST00000559941 ZDHHC15Q96MV8 337 aa25.42■■□□□ 1.66
CHRNA3-207ENST00000559941 GNL3LQ9NVN8 582 aaKnown RBP25.42■■□□□ 1.66
CHRNA3-207ENST00000559941 TCP10L2B9ZVM9 353 aa25.41■■□□□ 1.66
CHRNA3-207ENST00000559941 USP2O75604 605 aaPredicted RBP25.41■■□□□ 1.66
CHRNA3-207ENST00000559941 TNNI2P48788 182 aa25.41■■□□□ 1.66
CHRNA3-207ENST00000559941 MKRN3Q13064 507 aaKnown RBP25.41■■□□□ 1.66
CHRNA3-207ENST00000559941 HHIPL2Q6UWX4 724 aa25.41■■□□□ 1.66
CHRNA3-207ENST00000559941 TEPSINQ96N21 525 aa25.41■■□□□ 1.66
CHRNA3-207ENST00000559941 LAMB1P07942 1786 aa25.41■■□□□ 1.66
CHRNA3-207ENST00000559941 ZBTB22O15209 634 aa25.4■■□□□ 1.66
CHRNA3-207ENST00000559941 IREB2P48200 963 aaKnown RBP25.4■■□□□ 1.66
CHRNA3-207ENST00000559941 TMEM57Q8N5G2 664 aa25.4■■□□□ 1.66
CHRNA3-207ENST00000559941 MCOLN1Q9GZU1 580 aa25.4■■□□□ 1.66
CHRNA3-207ENST00000559941 ZBED9Q6R2W3 1325 aa25.39■■□□□ 1.66
CHRNA3-207ENST00000559941 OTOFQ9HC10 1997 aa25.39■■□□□ 1.66
CHRNA3-207ENST00000559941 SEMA3EO15041 775 aa25.39■■□□□ 1.66
CHRNA3-207ENST00000559941 PHKA1P46020 1223 aa25.39■■□□□ 1.66
CHRNA3-207ENST00000559941 SREBF2Q12772 1141 aa25.39■■□□□ 1.66
CHRNA3-207ENST00000559941 APOBEC3HQ6NTF7 200 aaKnown RBP25.39■■□□□ 1.66
CHRNA3-207ENST00000559941 CLMNQ96JQ2 1002 aa25.39■■□□□ 1.66
CHRNA3-207ENST00000559941 TMEM39BQ9GZU3 492 aa25.38■■□□□ 1.65
CHRNA3-207ENST00000559941 DENND2AQ9ULE3 1009 aa25.38■■□□□ 1.65
CHRNA3-207ENST00000559941 ZBTB48P10074 688 aaPredicted RBP25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 ADORA1P30542 326 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 TIMM10P62072 90 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 DGKZQ13574 1117 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 FKBP1CQ5VVH2 108 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 CCDC102BQ68D86 513 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 CDAN1Q8IWY9 1227 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 ANKRD13AQ8IZ07 590 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 AKAP2Q9Y2D5 859 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 SALL1Q9NSC2 1324 aa25.37■■□□□ 1.65
CHRNA3-207ENST00000559941 CACNB3P54284 484 aa25.36■■□□□ 1.65
CHRNA3-207ENST00000559941 TFCP2Q12800 502 aa25.36■■□□□ 1.65
CHRNA3-207ENST00000559941 WNK4Q96J92 1243 aa25.36■■□□□ 1.65
CHRNA3-207ENST00000559941 TMOD2Q9NZR1 351 aa25.36■■□□□ 1.65
CHRNA3-207ENST00000559941 PNMA6EA0A0J9YXQ4 647 aa25.35■■□□□ 1.65
CHRNA3-207ENST00000559941 A0A1B0GUL7 405 aa25.35■■□□□ 1.65
CHRNA3-207ENST00000559941 INHBEP58166 350 aa25.35■■□□□ 1.65
CHRNA3-207ENST00000559941 FAM83AQ86UY5 434 aa25.35■■□□□ 1.65
CHRNA3-207ENST00000559941 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.35■■□□□ 1.65
CHRNA3-207ENST00000559941 MANSC4A6NHS7 340 aaPredicted RBP25.34■■□□□ 1.65
CHRNA3-207ENST00000559941 TBC1D8O95759 1140 aa25.34■■□□□ 1.65
CHRNA3-207ENST00000559941 LDHBP07195 334 aaKnown RBP25.34■■□□□ 1.65
CHRNA3-207ENST00000559941 PRDX5P30044 214 aa25.34■■□□□ 1.65
CHRNA3-207ENST00000559941 MYH2Q9UKX2 1941 aa25.33■■□□□ 1.65
CHRNA3-207ENST00000559941 XAGE2Q96GT9 111 aa25.33■■□□□ 1.65
CHRNA3-207ENST00000559941 CFHR5Q9BXR6 569 aa25.33■■□□□ 1.65
CHRNA3-207ENST00000559941 DAGLAQ9Y4D2 1042 aa25.33■■□□□ 1.65
CHRNA3-207ENST00000559941 DIXDC1Q155Q3 683 aa25.32■■□□□ 1.64
CHRNA3-207ENST00000559941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.32■■□□□ 1.64
CHRNA3-207ENST00000559941 PDS5AQ29RF7 1337 aaKnown RBP25.32■■□□□ 1.64
CHRNA3-207ENST00000559941 GJA5P36382 358 aa25.31■■□□□ 1.64
CHRNA3-207ENST00000559941 G3BP1Q13283 466 aaKnown RBP eCLIP25.31■■□□□ 1.64
CHRNA3-207ENST00000559941 MVPQ14764 893 aaKnown RBP25.31■■□□□ 1.64
CHRNA3-207ENST00000559941 NOM1Q5C9Z4 860 aaKnown RBP25.31■■□□□ 1.64
CHRNA3-207ENST00000559941 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.31■■□□□ 1.64
CHRNA3-207ENST00000559941 FTSJ3Q8IY81 847 aaKnown RBP25.31■■□□□ 1.64
CHRNA3-207ENST00000559941 ZGPATQ8N5A5 531 aaKnown RBP25.31■■□□□ 1.64
CHRNA3-207ENST00000559941 RPAP1Q9BWH6 1393 aaPredicted RBP25.31■■□□□ 1.64
CHRNA3-207ENST00000559941 AK9Q5TCS8 1911 aa25.3■■□□□ 1.64
CHRNA3-207ENST00000559941 ALDH1A1P00352 501 aa25.3■■□□□ 1.64
CHRNA3-207ENST00000559941 MAP3K9P80192 1104 aa25.3■■□□□ 1.64
CHRNA3-207ENST00000559941 RASGRF1Q13972 1273 aa25.3■■□□□ 1.64
CHRNA3-207ENST00000559941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.3■■□□□ 1.64
CHRNA3-207ENST00000559941 ELP3Q9H9T3 547 aa25.3■■□□□ 1.64
CHRNA3-207ENST00000559941 CCDC85CA6NKD9 419 aa25.29■■□□□ 1.64
CHRNA3-207ENST00000559941 RLBP1P12271 317 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms