RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 CRKP46108 304 aa23.62■■□□□ 1.37
CDC42BPB-206ENST00000559790 SMC4Q9NTJ3 1288 aa23.62■■□□□ 1.37
CDC42BPB-206ENST00000559790 AK9Q5TCS8 1911 aa23.61■■□□□ 1.37
CDC42BPB-206ENST00000559790 GPR25O00155 361 aa23.61■■□□□ 1.37
CDC42BPB-206ENST00000559790 BCAMP50895 628 aa23.61■■□□□ 1.37
CDC42BPB-206ENST00000559790 MYO1BO43795 1136 aa23.6■■□□□ 1.37
CDC42BPB-206ENST00000559790 ZBTB48P10074 688 aaPredicted RBP23.6■■□□□ 1.37
CDC42BPB-206ENST00000559790 MLLT1Q03111 559 aaPredicted RBP23.6■■□□□ 1.37
CDC42BPB-206ENST00000559790 SREBF2Q12772 1141 aa23.6■■□□□ 1.37
CDC42BPB-206ENST00000559790 PTPRFP10586 1907 aa23.59■■□□□ 1.37
CDC42BPB-206ENST00000559790 EYA2O00167 538 aa23.59■■□□□ 1.37
CDC42BPB-206ENST00000559790 RBM5P52756 815 aaKnown RBP eCLIP23.59■■□□□ 1.37
CDC42BPB-206ENST00000559790 CHAF1AQ13111 956 aaPredicted RBP23.59■■□□□ 1.37
CDC42BPB-206ENST00000559790 TMEM39BQ9GZU3 492 aa23.59■■□□□ 1.37
CDC42BPB-206ENST00000559790 SOX10P56693 466 aa23.58■■□□□ 1.37
CDC42BPB-206ENST00000559790 PUM3Q15397 648 aaKnown RBP23.58■■□□□ 1.37
CDC42BPB-206ENST00000559790 IFNL1Q8IU54 200 aa23.58■■□□□ 1.37
CDC42BPB-206ENST00000559790 HPS5Q9UPZ3 1129 aa23.58■■□□□ 1.37
CDC42BPB-206ENST00000559790 UNCXA6NJT0 531 aa23.57■■□□□ 1.36
CDC42BPB-206ENST00000559790 PPP1R12BO60237 982 aaPredicted RBP23.57■■□□□ 1.36
CDC42BPB-206ENST00000559790 CACNB3P54284 484 aa23.57■■□□□ 1.36
CDC42BPB-206ENST00000559790 HDLBPQ00341 1268 aaKnown RBP23.57■■□□□ 1.36
CDC42BPB-206ENST00000559790 CAP1Q01518 475 aa23.57■■□□□ 1.36
CDC42BPB-206ENST00000559790 SUPT20HL1Q3ZLR7 823 aa23.57■■□□□ 1.36
CDC42BPB-206ENST00000559790 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.57■■□□□ 1.36
CDC42BPB-206ENST00000559790 MANSC4A6NHS7 340 aaPredicted RBP23.56■■□□□ 1.36
CDC42BPB-206ENST00000559790 TCP10L2B9ZVM9 353 aa23.56■■□□□ 1.36
CDC42BPB-206ENST00000559790 CNKSR2Q8WXI2 1034 aa23.56■■□□□ 1.36
CDC42BPB-206ENST00000559790 SLC10A4Q96EP9 437 aa23.56■■□□□ 1.36
CDC42BPB-206ENST00000559790 PTPN18Q99952 460 aa23.56■■□□□ 1.36
CDC42BPB-206ENST00000559790 PHIPQ8WWQ0 1821 aa23.56■■□□□ 1.36
CDC42BPB-206ENST00000559790 KIAA0100Q14667 2235 aaKnown RBP23.56■■□□□ 1.36
CDC42BPB-206ENST00000559790 TNFAIP1Q13829 316 aa23.55■■□□□ 1.36
CDC42BPB-206ENST00000559790 APOBEC3HQ6NTF7 200 aaKnown RBP23.55■■□□□ 1.36
CDC42BPB-206ENST00000559790 TBC1D22AQ8WUA7 517 aa23.55■■□□□ 1.36
CDC42BPB-206ENST00000559790 ZDHHC15Q96MV8 337 aa23.55■■□□□ 1.36
CDC42BPB-206ENST00000559790 NOB1Q9ULX3 412 aaKnown RBP23.55■■□□□ 1.36
CDC42BPB-206ENST00000559790 BRCA2P51587 3418 aa23.55■■□□□ 1.36
CDC42BPB-206ENST00000559790 MYO5AQ9Y4I1 1855 aaKnown RBP23.55■■□□□ 1.36
CDC42BPB-206ENST00000559790 RPAP1Q9BWH6 1393 aaPredicted RBP23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 CDK5RAP2Q96SN8 1893 aa23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 TESPA1A2RU30 521 aaPredicted RBP23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 CT47B1P0C2W7 299 aaPredicted RBP23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 ANKRD13AQ8IZ07 590 aa23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 MS4A4AQ96JQ5 239 aa23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 MEIS3Q99687 375 aa23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 MKI67P46013 3256 aaKnown RBP23.54■■□□□ 1.36
CDC42BPB-206ENST00000559790 CCER2I3L3R5 266 aa23.53■■□□□ 1.36
CDC42BPB-206ENST00000559790 IREB2P48200 963 aaKnown RBP23.53■■□□□ 1.36
CDC42BPB-206ENST00000559790 CAVIN4Q5BKX8 364 aa23.53■■□□□ 1.36
CDC42BPB-206ENST00000559790 VPS37DQ86XT2 251 aa23.53■■□□□ 1.36
CDC42BPB-206ENST00000559790 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.53■■□□□ 1.36
CDC42BPB-206ENST00000559790 LRRFIP2Q9Y608 721 aaKnown RBP23.53■■□□□ 1.36
CDC42BPB-206ENST00000559790 FKTNO75072 461 aa23.52■■□□□ 1.36
CDC42BPB-206ENST00000559790 RARSP54136 660 aaKnown RBP23.52■■□□□ 1.36
CDC42BPB-206ENST00000559790 VGLL4Q14135 290 aa23.52■■□□□ 1.36
CDC42BPB-206ENST00000559790 TEKT1Q969V4 418 aa23.52■■□□□ 1.36
CDC42BPB-206ENST00000559790 ELP3Q9H9T3 547 aa23.52■■□□□ 1.36
CDC42BPB-206ENST00000559790 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
CDC42BPB-206ENST00000559790 CIAO1O76071 339 aa23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 IFIT1P09914 478 aaKnown RBP23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 UBTFL1P0CB47 393 aaPredicted RBP23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 LPIN2Q92539 896 aa23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 OPTNQ96CV9 577 aa23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 MRIQ9BWK5 157 aa23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 SIL1Q9H173 461 aa23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 TNNQ9UQP3 1299 aa23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 RFX7Q2KHR2 1363 aa23.51■■□□□ 1.35
CDC42BPB-206ENST00000559790 DOCK1Q14185 1865 aa23.5■■□□□ 1.35
CDC42BPB-206ENST00000559790 ALDH1A1P00352 501 aa23.5■■□□□ 1.35
CDC42BPB-206ENST00000559790 INHBEP58166 350 aa23.5■■□□□ 1.35
CDC42BPB-206ENST00000559790 CRHR2Q13324 411 aa23.5■■□□□ 1.35
CDC42BPB-206ENST00000559790 PKN2Q16513 984 aaKnown RBP23.5■■□□□ 1.35
CDC42BPB-206ENST00000559790 SUGT1Q9Y2Z0 365 aa23.5■■□□□ 1.35
CDC42BPB-206ENST00000559790 SNCAIPQ9Y6H5 919 aa23.5■■□□□ 1.35
CDC42BPB-206ENST00000559790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.5■■□□□ 1.35
CDC42BPB-206ENST00000559790 SLC5A1P13866 664 aa23.49■■□□□ 1.35
CDC42BPB-206ENST00000559790 PRDX5P30044 214 aa23.49■■□□□ 1.35
CDC42BPB-206ENST00000559790 FBXO46Q6PJ61 603 aaPredicted RBP23.49■■□□□ 1.35
CDC42BPB-206ENST00000559790 BRI3BPQ8WY22 251 aa23.49■■□□□ 1.35
CDC42BPB-206ENST00000559790 FBXO3Q9UK99 471 aa23.49■■□□□ 1.35
CDC42BPB-206ENST00000559790 MAST2Q6P0Q8 1798 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 ATAD5Q96QE3 1844 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 MGAMO43451 1857 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 PHKA1P46020 1223 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 DIXDC1Q155Q3 683 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 ATP2B3Q16720 1220 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 FKBP1CQ5VVH2 108 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 HHIPL2Q6UWX4 724 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 FAM83AQ86UY5 434 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 API5Q9BZZ5 524 aaKnown RBP23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 DAGLAQ9Y4D2 1042 aa23.48■■□□□ 1.35
CDC42BPB-206ENST00000559790 SIPA1L1O43166 1804 aa23.47■■□□□ 1.35
CDC42BPB-206ENST00000559790 ZBTB22O15209 634 aa23.47■■□□□ 1.35
CDC42BPB-206ENST00000559790 ADORA1P30542 326 aa23.47■■□□□ 1.35
CDC42BPB-206ENST00000559790 INTS3Q68E01 1043 aaKnown RBP23.47■■□□□ 1.35
CDC42BPB-206ENST00000559790 OTOP1Q7RTM1 612 aa23.47■■□□□ 1.35
CDC42BPB-206ENST00000559790 COPRSQ9NQ92 184 aa23.47■■□□□ 1.35
CDC42BPB-206ENST00000559790 MAST3O60307 1309 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms