RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 TRIM11Q96F44 468 aa9.33□□□□□ -0.92
ZEB1-216ENST00000559496 SERPINA10Q9UK55 444 aa9.33□□□□□ -0.92
ZEB1-216ENST00000559496 ZMIZ1Q9ULJ6 1067 aa9.33□□□□□ -0.92
ZEB1-216ENST00000559496 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.32□□□□□ -0.92
ZEB1-216ENST00000559496 KTN1Q86UP2 1357 aaKnown RBP9.32□□□□□ -0.92
ZEB1-216ENST00000559496 GSX2Q9BZM3 304 aa9.32□□□□□ -0.92
ZEB1-216ENST00000559496 SLC12A5Q9H2X9 1139 aa9.32□□□□□ -0.92
ZEB1-216ENST00000559496 KNSTRNQ9Y448 316 aa9.32□□□□□ -0.92
ZEB1-216ENST00000559496 EPB42P16452 691 aa9.31□□□□□ -0.92
ZEB1-216ENST00000559496 INPP5BP32019 993 aa9.31□□□□□ -0.92
ZEB1-216ENST00000559496 ADH7P40394 386 aa9.31□□□□□ -0.92
ZEB1-216ENST00000559496 CCINQ13939 588 aa9.31□□□□□ -0.92
ZEB1-216ENST00000559496 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
ZEB1-216ENST00000559496 PRIMPOLQ96LW4 560 aa9.31□□□□□ -0.92
ZEB1-216ENST00000559496 NWD1Q149M9 1564 aa9.31□□□□□ -0.92
ZEB1-216ENST00000559496 ANKRD36BQ8N2N9 1353 aa9.3□□□□□ -0.92
ZEB1-216ENST00000559496 IDH3AP50213 366 aa9.3□□□□□ -0.92
ZEB1-216ENST00000559496 RALBP1Q15311 655 aa9.3□□□□□ -0.92
ZEB1-216ENST00000559496 PNMA5Q96PV4 448 aa9.3□□□□□ -0.92
ZEB1-216ENST00000559496 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
ZEB1-216ENST00000559496 C11orf16Q9NQ32 467 aa9.3□□□□□ -0.92
ZEB1-216ENST00000559496 PRDM6Q9NQX0 595 aa9.3□□□□□ -0.92
ZEB1-216ENST00000559496 STARD13Q9Y3M8 1113 aa9.3□□□□□ -0.92
ZEB1-216ENST00000559496 NSD3Q9BZ95 1437 aa9.29□□□□□ -0.92
ZEB1-216ENST00000559496 PRMT3O60678 531 aa9.29□□□□□ -0.92
ZEB1-216ENST00000559496 MICAL2O94851 1124 aa9.29□□□□□ -0.92
ZEB1-216ENST00000559496 FKBP5Q13451 457 aaPredicted RBP9.29□□□□□ -0.92
ZEB1-216ENST00000559496 COL9A3Q14050 684 aaPredicted RBP9.29□□□□□ -0.92
ZEB1-216ENST00000559496 CC2D1BQ5T0F9 858 aaKnown RBP9.29□□□□□ -0.92
ZEB1-216ENST00000559496 STK32AQ8WU08 396 aa9.29□□□□□ -0.92
ZEB1-216ENST00000559496 PBXIP1Q96AQ6 731 aa9.29□□□□□ -0.92
ZEB1-216ENST00000559496 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.29□□□□□ -0.92
ZEB1-216ENST00000559496 PARD3Q8TEW0 1356 aa9.29□□□□□ -0.92
ZEB1-216ENST00000559496 STRCQ7RTU9 1775 aa9.29□□□□□ -0.92
ZEB1-216ENST00000559496 M0R082 166 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 ADAM23O75077 832 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 NEFLP07196 543 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 ARSDP51689 593 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 OCLNQ16625 522 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
ZEB1-216ENST00000559496 MICALL1Q8N3F8 863 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 ZNF417Q8TAU3 575 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 NUDT16Q96DE0 195 aaKnown RBP9.28□□□□□ -0.92
ZEB1-216ENST00000559496 IFT43Q96FT9 208 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 ZNF587Q96SQ5 575 aaPredicted RBP9.28□□□□□ -0.92
ZEB1-216ENST00000559496 UBE2OQ9C0C9 1292 aaKnown RBP9.28□□□□□ -0.92
ZEB1-216ENST00000559496 TERF2IPQ9NYB0 399 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 LRFN2Q9ULH4 789 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 ATP7BP35670 1465 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 A0A1W2PP64 1363 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 NPC1L1Q9UHC9 1359 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 PPIP5K1Q6PFW1 1433 aa9.28□□□□□ -0.92
ZEB1-216ENST00000559496 NKTRP30414 1462 aaKnown RBP9.27□□□□□ -0.92
ZEB1-216ENST00000559496 SPDYE3A6NKU9 549 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 GRNP28799 593 aaKnown RBP9.27□□□□□ -0.93
ZEB1-216ENST00000559496 CHRNA4P43681 627 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 BAG6P46379 1132 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 GLIPR1L2Q4G1C9 344 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 CD163Q86VB7 1156 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 MYBBP1AQ9BQG0 1328 aaKnown RBP9.27□□□□□ -0.93
ZEB1-216ENST00000559496 USP32Q8NFA0 1604 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 NALCNQ8IZF0 1738 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 CD163L1Q9NR16 1453 aa9.27□□□□□ -0.93
ZEB1-216ENST00000559496 ALBP02768 609 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 COX20Q5RI15 118 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 C20orf204Q6ZNR8 217 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 COL26A1Q96A83 441 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 IGFLR1Q9H665 355 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 CDC42BPGQ6DT37 1551 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 CGNL1Q0VF96 1302 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 PRR36Q9H6K5 1346 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 TOPAZ1Q8N9V7 1692 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 ADGRL3Q9HAR2 1447 aa9.26□□□□□ -0.93
ZEB1-216ENST00000559496 SPATA31C1P0DKV0 1188 aa9.25□□□□□ -0.93
ZEB1-216ENST00000559496 TMEM164Q5U3C3 297 aa9.25□□□□□ -0.93
ZEB1-216ENST00000559496 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
ZEB1-216ENST00000559496 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
ZEB1-216ENST00000559496 MRS2Q9HD23 443 aa9.25□□□□□ -0.93
ZEB1-216ENST00000559496 FMN2Q9NZ56 1722 aa9.25□□□□□ -0.93
ZEB1-216ENST00000559496 ANKARQ7Z5J8 1434 aa9.25□□□□□ -0.93
ZEB1-216ENST00000559496 ITSN1Q15811 1721 aa9.25□□□□□ -0.93
ZEB1-216ENST00000559496 OPLAHO14841 1288 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 NFKB1P19838 968 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 TBC1D8BQ0IIM8 1120 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 CCDC184Q52MB2 194 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 C8orf86Q6ZUL3 223 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 SLC6A14Q9UN76 642 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 NSD2O96028 1365 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 STRCP1A6NGW2 1772 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 MAP3K6O95382 1288 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 NID1P14543 1247 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 PCSK7Q16549 785 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 NLRP13Q86W25 1043 aa9.24□□□□□ -0.93
ZEB1-216ENST00000559496 CLP1Q92989 425 aaKnown RBP9.24□□□□□ -0.93
ZEB1-216ENST00000559496 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
ZEB1-216ENST00000559496 CXXC1Q9P0U4 656 aaPredicted RBP9.24□□□□□ -0.93
ZEB1-216ENST00000559496 BRD4O60885 1362 aaPredicted RBP9.23□□□□□ -0.93
ZEB1-216ENST00000559496 CPSF1Q10570 1443 aaKnown RBP9.23□□□□□ -0.93
ZEB1-216ENST00000559496 AKAP12Q02952 1782 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms