RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 PRMT6Q96LA8 375 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-211ENST00000559460 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.41
SMAD3-211ENST00000559460 PCDHAC2Q9Y5I4 1007 aa12.52□□□□□ -0.41
SMAD3-211ENST00000559460 FAM205AQ6ZU69 1335 aa12.52□□□□□ -0.41
SMAD3-211ENST00000559460 ADCY3O60266 1144 aa12.51□□□□□ -0.41
SMAD3-211ENST00000559460 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMAD3-211ENST00000559460 JARID2Q92833 1246 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-211ENST00000559460 HOOK2Q96ED9 719 aa12.51□□□□□ -0.41
SMAD3-211ENST00000559460 FAM161BQ96MY7 647 aa12.51□□□□□ -0.41
SMAD3-211ENST00000559460 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
SMAD3-211ENST00000559460 MPHOSPH8Q99549 860 aa12.51□□□□□ -0.41
SMAD3-211ENST00000559460 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
SMAD3-211ENST00000559460 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
SMAD3-211ENST00000559460 ADGRA2Q96PE1 1338 aa12.51□□□□□ -0.41
SMAD3-211ENST00000559460 TCP10L2B9ZVM9 353 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 PDHXO00330 501 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 IRF6O14896 467 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 INHAP05111 366 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 HOXB7P09629 217 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 CTGFP29279 349 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 ZNF804AQ7Z570 1209 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 FAM122AQ96E09 287 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 WRNIP1Q96S55 665 aa12.5□□□□□ -0.41
SMAD3-211ENST00000559460 PARK7Q99497 189 aaKnown RBP12.5□□□□□ -0.41
SMAD3-211ENST00000559460 ZNF70Q9UC06 446 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-211ENST00000559460 KLRK1P26718 216 aa12.49□□□□□ -0.41
SMAD3-211ENST00000559460 FKBP1AP62942 108 aaKnown RBP12.49□□□□□ -0.41
SMAD3-211ENST00000559460 PPIL2Q13356 520 aa12.49□□□□□ -0.41
SMAD3-211ENST00000559460 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
SMAD3-211ENST00000559460 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
SMAD3-211ENST00000559460 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-211ENST00000559460 ANKRD23Q86SG2 305 aa12.49□□□□□ -0.41
SMAD3-211ENST00000559460 CERS5Q8N5B7 392 aa12.49□□□□□ -0.41
SMAD3-211ENST00000559460 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
SMAD3-211ENST00000559460 GREM2Q9H772 168 aa12.49□□□□□ -0.41
SMAD3-211ENST00000559460 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
SMAD3-211ENST00000559460 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
SMAD3-211ENST00000559460 PLA2G5P39877 138 aa12.48□□□□□ -0.41
SMAD3-211ENST00000559460 MAFAQ8NHW3 353 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-211ENST00000559460 PXYLP1Q8TE99 480 aa12.48□□□□□ -0.41
SMAD3-211ENST00000559460 GUCD1Q96NT3 240 aa12.48□□□□□ -0.41
SMAD3-211ENST00000559460 TMEM39BQ9GZU3 492 aa12.48□□□□□ -0.41
SMAD3-211ENST00000559460 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
SMAD3-211ENST00000559460 SNCAIPQ9Y6H5 919 aa12.48□□□□□ -0.41
SMAD3-211ENST00000559460 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
SMAD3-211ENST00000559460 ELNP15502 786 aa12.47□□□□□ -0.41
SMAD3-211ENST00000559460 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
SMAD3-211ENST00000559460 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-211ENST00000559460 TTLL11Q8NHH1 800 aa12.47□□□□□ -0.41
SMAD3-211ENST00000559460 DIS3LQ8TF46 1054 aaKnown RBP12.47□□□□□ -0.41
SMAD3-211ENST00000559460 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
SMAD3-211ENST00000559460 TMOD2Q9NZR1 351 aa12.47□□□□□ -0.41
SMAD3-211ENST00000559460 SERPINA10Q9UK55 444 aa12.47□□□□□ -0.41
SMAD3-211ENST00000559460 GABRQQ9UN88 632 aa12.47□□□□□ -0.41
SMAD3-211ENST00000559460 TNPO2O14787 897 aaKnown RBP12.46□□□□□ -0.41
SMAD3-211ENST00000559460 FLT3LGP49771 235 aa12.46□□□□□ -0.41
SMAD3-211ENST00000559460 PPATQ06203 517 aa12.46□□□□□ -0.41
SMAD3-211ENST00000559460 ZKSCAN4Q969J2 545 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-211ENST00000559460 TEPSINQ96N21 525 aa12.46□□□□□ -0.41
SMAD3-211ENST00000559460 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
SMAD3-211ENST00000559460 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■■□□□ 14.5
SMAD3-211ENST00000559460 PAK6Q9NQU5 681 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-211ENST00000559460 TTF2Q9UNY4 1162 aaKnown RBP12.46□□□□□ -0.41
SMAD3-211ENST00000559460 JAG2Q9Y219 1238 aa12.46□□□□□ -0.41
SMAD3-211ENST00000559460 AOX1Q06278 1338 aa12.45□□□□□ -0.42
SMAD3-211ENST00000559460 TMEM265A0A087WTH1 108 aa12.45□□□□□ -0.42
SMAD3-211ENST00000559460 NEXNQ0ZGT2 675 aa12.45□□□□□ -0.42
SMAD3-211ENST00000559460 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
SMAD3-211ENST00000559460 COA7Q96BR5 231 aa12.45□□□□□ -0.42
SMAD3-211ENST00000559460 UNC80Q8N2C7 3258 aa12.45□□□□□ -0.42
SMAD3-211ENST00000559460 LAMA3Q16787 3333 aa12.44□□□□□ -0.42
SMAD3-211ENST00000559460 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
SMAD3-211ENST00000559460 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
SMAD3-211ENST00000559460 IL1R1P14778 569 aa12.44□□□□□ -0.42
SMAD3-211ENST00000559460 ITGA6P23229 1130 aa12.44□□□□□ -0.42
SMAD3-211ENST00000559460 CHRNDQ07001 517 aa12.44□□□□□ -0.42
SMAD3-211ENST00000559460 IRF5Q13568 498 aa12.44□□□□□ -0.42
SMAD3-211ENST00000559460 DZIP1LQ8IYY4 767 aaKnown RBP12.44□□□□□ -0.42
SMAD3-211ENST00000559460 LBHD1Q9BQE6 289 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-211ENST00000559460 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-211ENST00000559460 CHL1O00533 1208 aa12.43□□□□□ -0.42
SMAD3-211ENST00000559460 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-211ENST00000559460 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
SMAD3-211ENST00000559460 MFSD14BQ5SR56 506 aa12.43□□□□□ -0.42
SMAD3-211ENST00000559460 DUSP27Q5VZP5 1158 aa12.43□□□□□ -0.42
SMAD3-211ENST00000559460 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
SMAD3-211ENST00000559460 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
SMAD3-211ENST00000559460 CYP2C8P10632 490 aa12.42□□□□□ -0.42
SMAD3-211ENST00000559460 BCRP11274 1271 aa12.42□□□□□ -0.42
SMAD3-211ENST00000559460 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
SMAD3-211ENST00000559460 CRKP46108 304 aa12.42□□□□□ -0.42
SMAD3-211ENST00000559460 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-211ENST00000559460 CDX2Q99626 313 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-211ENST00000559460 ZNF341Q9BYN7 854 aa12.42□□□□□ -0.42
SMAD3-211ENST00000559460 HMX1Q9NP08 348 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-211ENST00000559460 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
SMAD3-211ENST00000559460 ALPK3Q96L96 1907 aa12.41□□□□□ -0.42
SMAD3-211ENST00000559460 FOSL2P15408 326 aa12.41□□□□□ -0.42
SMAD3-211ENST00000559460 TJAP1Q5JTD0 557 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms