RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 UBTFL1P0CB47 393 aaPredicted RBP18.69■□□□□ 0.58
LRRC28-213ENST00000559399 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
LRRC28-213ENST00000559399 BCAMP50895 628 aa18.69■□□□□ 0.58
LRRC28-213ENST00000559399 WNK4Q96J92 1243 aa18.69■□□□□ 0.58
LRRC28-213ENST00000559399 CCER2I3L3R5 266 aa18.68■□□□□ 0.58
LRRC28-213ENST00000559399 FGFR2P21802 821 aa18.68■□□□□ 0.58
LRRC28-213ENST00000559399 INHBEP58166 350 aa18.68■□□□□ 0.58
LRRC28-213ENST00000559399 HDLBPQ00341 1268 aaKnown RBP18.68■□□□□ 0.58
LRRC28-213ENST00000559399 GRIK5Q16478 980 aa18.68■□□□□ 0.58
LRRC28-213ENST00000559399 PKN2Q16513 984 aaKnown RBP18.68■□□□□ 0.58
LRRC28-213ENST00000559399 ANKRD13AQ8IZ07 590 aa18.68■□□□□ 0.58
LRRC28-213ENST00000559399 TEKT1Q969V4 418 aa18.68■□□□□ 0.58
LRRC28-213ENST00000559399 API5Q9BZZ5 524 aaKnown RBP18.68■□□□□ 0.58
LRRC28-213ENST00000559399 NOB1Q9ULX3 412 aaKnown RBP18.68■□□□□ 0.58
LRRC28-213ENST00000559399 CASP8AP2Q9UKL3 1982 aa18.68■□□□□ 0.58
LRRC28-213ENST00000559399 TCP10L2B9ZVM9 353 aa18.67■□□□□ 0.58
LRRC28-213ENST00000559399 USP2O75604 605 aaPredicted RBP18.67■□□□□ 0.58
LRRC28-213ENST00000559399 TNNI2P48788 182 aa18.67■□□□□ 0.58
LRRC28-213ENST00000559399 IFNL1Q8IU54 200 aa18.67■□□□□ 0.58
LRRC28-213ENST00000559399 LPIN2Q92539 896 aa18.67■□□□□ 0.58
LRRC28-213ENST00000559399 SUGT1Q9Y2Z0 365 aa18.67■□□□□ 0.58
LRRC28-213ENST00000559399 SLC5A1P13866 664 aa18.66■□□□□ 0.58
LRRC28-213ENST00000559399 TEPSINQ96N21 525 aa18.66■□□□□ 0.58
LRRC28-213ENST00000559399 HDAC5Q9UQL6 1122 aa18.66■□□□□ 0.58
LRRC28-213ENST00000559399 MAST3O60307 1309 aa18.66■□□□□ 0.58
LRRC28-213ENST00000559399 CDAN1Q8IWY9 1227 aa18.65■□□□□ 0.58
LRRC28-213ENST00000559399 ZDHHC15Q96MV8 337 aa18.65■□□□□ 0.58
LRRC28-213ENST00000559399 TMEM39BQ9GZU3 492 aa18.65■□□□□ 0.58
LRRC28-213ENST00000559399 FBXO3Q9UK99 471 aa18.65■□□□□ 0.58
LRRC28-213ENST00000559399 HPS5Q9UPZ3 1129 aa18.65■□□□□ 0.58
LRRC28-213ENST00000559399 FKTNO75072 461 aa18.64■□□□□ 0.57
LRRC28-213ENST00000559399 CIAO1O76071 339 aa18.64■□□□□ 0.57
LRRC28-213ENST00000559399 ATG9AQ7Z3C6 839 aa18.64■□□□□ 0.57
LRRC28-213ENST00000559399 MRIQ9BWK5 157 aa18.64■□□□□ 0.57
LRRC28-213ENST00000559399 SIL1Q9H173 461 aa18.64■□□□□ 0.57
LRRC28-213ENST00000559399 R3HDMLQ9H3Y0 253 aa18.64■□□□□ 0.57
LRRC28-213ENST00000559399 TMOD2Q9NZR1 351 aa18.64■□□□□ 0.57
LRRC28-213ENST00000559399 IGF2BP3O00425 579 aaKnown RBP eCLIP18.63■□□□□ 0.57
LRRC28-213ENST00000559399 GJA5P36382 358 aa18.63■□□□□ 0.57
LRRC28-213ENST00000559399 CACNB3P54284 484 aa18.63■□□□□ 0.57
LRRC28-213ENST00000559399 SOX10P56693 466 aa18.63■□□□□ 0.57
LRRC28-213ENST00000559399 WDR66Q8TBY9 1149 aa18.63■□□□□ 0.57
LRRC28-213ENST00000559399 ELP3Q9H9T3 547 aa18.63■□□□□ 0.57
LRRC28-213ENST00000559399 LRRFIP2Q9Y608 721 aaKnown RBP18.63■□□□□ 0.57
LRRC28-213ENST00000559399 RARSP54136 660 aaKnown RBP18.62■□□□□ 0.57
LRRC28-213ENST00000559399 ATP2B3Q16720 1220 aa18.62■□□□□ 0.57
LRRC28-213ENST00000559399 OTUD7BQ6GQQ9 843 aa18.62■□□□□ 0.57
LRRC28-213ENST00000559399 OPTNQ96CV9 577 aa18.62■□□□□ 0.57
LRRC28-213ENST00000559399 CEP126Q9P2H0 1117 aa18.62■□□□□ 0.57
LRRC28-213ENST00000559399 ARAP2Q8WZ64 1704 aa18.62■□□□□ 0.57
LRRC28-213ENST00000559399 AKAP11Q9UKA4 1901 aa18.61■□□□□ 0.57
LRRC28-213ENST00000559399 APOBEC3HQ6NTF7 200 aaKnown RBP18.61■□□□□ 0.57
LRRC28-213ENST00000559399 FBXO46Q6PJ61 603 aaPredicted RBP18.61■□□□□ 0.57
LRRC28-213ENST00000559399 HHIPL2Q6UWX4 724 aa18.61■□□□□ 0.57
LRRC28-213ENST00000559399 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
LRRC28-213ENST00000559399 FAM83AQ86UY5 434 aa18.61■□□□□ 0.57
LRRC28-213ENST00000559399 CSADQ9Y600 493 aa18.61■□□□□ 0.57
LRRC28-213ENST00000559399 TESPA1A2RU30 521 aaPredicted RBP18.6■□□□□ 0.57
LRRC28-213ENST00000559399 IL15P40933 162 aaPredicted RBP18.6■□□□□ 0.57
LRRC28-213ENST00000559399 MAP3K9P80192 1104 aa18.6■□□□□ 0.57
LRRC28-213ENST00000559399 VGLL4Q14135 290 aa18.6■□□□□ 0.57
LRRC28-213ENST00000559399 FKBP1CQ5VVH2 108 aa18.6■□□□□ 0.57
LRRC28-213ENST00000559399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.6■□□□□ 0.57
LRRC28-213ENST00000559399 MEIS3Q99687 375 aa18.6■□□□□ 0.57
LRRC28-213ENST00000559399 GNL3LQ9NVN8 582 aaKnown RBP18.6■□□□□ 0.57
LRRC28-213ENST00000559399 ECM29Q5VYK3 1845 aa18.6■□□□□ 0.57
LRRC28-213ENST00000559399 ARHGAP45Q92619 1136 aa18.59■□□□□ 0.57
LRRC28-213ENST00000559399 HOOK2Q96ED9 719 aa18.59■□□□□ 0.57
LRRC28-213ENST00000559399 CRHR2Q13324 411 aa18.58■□□□□ 0.56
LRRC28-213ENST00000559399 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.56
LRRC28-213ENST00000559399 CNKSR2Q8WXI2 1034 aa18.58■□□□□ 0.56
LRRC28-213ENST00000559399 PTPN18Q99952 460 aa18.58■□□□□ 0.56
LRRC28-213ENST00000559399 COPRSQ9NQ92 184 aa18.58■□□□□ 0.56
LRRC28-213ENST00000559399 PA2G4Q9UQ80 394 aaKnown RBP18.58■□□□□ 0.56
LRRC28-213ENST00000559399 RPAP1Q9BWH6 1393 aaPredicted RBP18.57■□□□□ 0.56
LRRC28-213ENST00000559399 SEMA3EO15041 775 aa18.57■□□□□ 0.56
LRRC28-213ENST00000559399 GNAI3P08754 354 aa18.57■□□□□ 0.56
LRRC28-213ENST00000559399 GTF2A2P52657 109 aa18.57■□□□□ 0.56
LRRC28-213ENST00000559399 OTUD5Q96G74 571 aa18.57■□□□□ 0.56
LRRC28-213ENST00000559399 MS4A4AQ96JQ5 239 aa18.57■□□□□ 0.56
LRRC28-213ENST00000559399 SALL1Q9NSC2 1324 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 SPDYE5A6NIY4 337 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 LDHBP07195 334 aaKnown RBP18.56■□□□□ 0.56
LRRC28-213ENST00000559399 PRDX5P30044 214 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 DIXDC1Q155Q3 683 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 DCAF15Q66K64 600 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 BRI3BPQ8WY22 251 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 ERO1AQ96HE7 468 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 WRNIP1Q96S55 665 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 DENND2AQ9ULE3 1009 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 DAGLAQ9Y4D2 1042 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 TRIM17Q9Y577 477 aa18.56■□□□□ 0.56
LRRC28-213ENST00000559399 CCL15-CCL14A0A0B4J2E2 113 aa18.55■□□□□ 0.56
LRRC28-213ENST00000559399 PHKA1P46020 1223 aa18.55■□□□□ 0.56
LRRC28-213ENST00000559399 CCL15Q16663 113 aa18.55■□□□□ 0.56
LRRC28-213ENST00000559399 SNCAIPQ9Y6H5 919 aa18.55■□□□□ 0.56
LRRC28-213ENST00000559399 ZBTB22O15209 634 aa18.54■□□□□ 0.56
LRRC28-213ENST00000559399 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
LRRC28-213ENST00000559399 SRGAP3O43295 1099 aa18.54■□□□□ 0.56
LRRC28-213ENST00000559399 ADORA1P30542 326 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms