RNA–Protein interactions for RNA: ENST00000559312.5

NUMB-231, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-231ENST00000559312 LRRC4BQ9NT99 713 aa9.68□□□□□ -0.86
NUMB-231ENST00000559312 GMPR2Q9P2T1 348 aaKnown RBP9.68□□□□□ -0.86
NUMB-231ENST00000559312 LAMB4A4D0S4 1761 aa9.68□□□□□ -0.86
NUMB-231ENST00000559312 STARD3NLO95772 234 aa9.67□□□□□ -0.86
NUMB-231ENST00000559312 ATP1A2P50993 1020 aa9.67□□□□□ -0.86
NUMB-231ENST00000559312 GTF2IP78347 998 aa9.67□□□□□ -0.86
NUMB-231ENST00000559312 ITPK1Q13572 414 aa9.67□□□□□ -0.86
NUMB-231ENST00000559312 TRMT2AQ8IZ69 625 aaKnown RBP9.67□□□□□ -0.86
NUMB-231ENST00000559312 TSR2Q969E8 191 aaKnown RBP9.67□□□□□ -0.86
NUMB-231ENST00000559312 PCDHGA11Q9Y5H2 935 aa9.67□□□□□ -0.86
NUMB-231ENST00000559312 CNTNAP4Q9C0A0 1308 aa9.67□□□□□ -0.86
NUMB-231ENST00000559312 C4BP0C0L5 1744 aa9.67□□□□□ -0.86
NUMB-231ENST00000559312 A0A1W2PRU2 124 aa9.66□□□□□ -0.86
NUMB-231ENST00000559312 DNAJC10Q8IXB1 793 aa9.66□□□□□ -0.86
NUMB-231ENST00000559312 CT47B1P0C2W7 299 aaPredicted RBP9.65□□□□□ -0.86
NUMB-231ENST00000559312 CYP19A1P11511 503 aaPredicted RBP9.65□□□□□ -0.86
NUMB-231ENST00000559312 RFX1P22670 979 aa9.65□□□□□ -0.86
NUMB-231ENST00000559312 KCNQ4P56696 695 aa9.65□□□□□ -0.86
NUMB-231ENST00000559312 DUSP27Q5VZP5 1158 aa9.65□□□□□ -0.86
NUMB-231ENST00000559312 LINC00116Q8NCU8 138 aa9.65□□□□□ -0.86
NUMB-231ENST00000559312 VRTNQ9H8Y1 702 aa9.65□□□□□ -0.86
NUMB-231ENST00000559312 ARHGEF10LQ9HCE6 1279 aa9.65□□□□□ -0.86
NUMB-231ENST00000559312 MYH14Q7Z406 1995 aaKnown RBP9.65□□□□□ -0.86
NUMB-231ENST00000559312 ERBB4Q15303 1308 aa9.65□□□□□ -0.86
NUMB-231ENST00000559312 CRKLP46109 303 aaKnown RBP9.65□□□□□ -0.87
NUMB-231ENST00000559312 C8orf58Q8NAV2 365 aa9.65□□□□□ -0.87
NUMB-231ENST00000559312 ZNF428Q96B54 188 aa9.65□□□□□ -0.87
NUMB-231ENST00000559312 TRIM47Q96LD4 638 aa9.65□□□□□ -0.87
NUMB-231ENST00000559312 INSM2Q96T92 566 aaPredicted RBP9.65□□□□□ -0.87
NUMB-231ENST00000559312 CCDC87Q9NVE4 849 aa9.65□□□□□ -0.87
NUMB-231ENST00000559312 USP16Q9Y5T5 823 aa9.65□□□□□ -0.87
NUMB-231ENST00000559312 QSER1Q2KHR3 1735 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 PRAMEF22A3QJZ6 481 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 MEN1O00255 615 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
NUMB-231ENST00000559312 CLN3Q13286 438 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 SLC15A2Q16348 729 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 KRT24Q2M2I5 525 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
NUMB-231ENST00000559312 OGFOD1Q8N543 542 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 FLAD1Q8NFF5 587 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 NLRP3Q96P20 1036 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 POLMQ9NP87 494 aaPredicted RBP9.64□□□□□ -0.87
NUMB-231ENST00000559312 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
NUMB-231ENST00000559312 STK32BQ9NY57 414 aa9.64□□□□□ -0.87
NUMB-231ENST00000559312 CACNA1FO60840 1977 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 UBR3Q6ZT12 1888 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 TTLL8A6PVC2 850 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 RPS6KA4O75676 772 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 RASA1P20936 1047 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 SSFA2P28290 1259 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 IL6STP40189 918 aaPredicted RBP9.63□□□□□ -0.87
NUMB-231ENST00000559312 CCDC30Q5VVM6 783 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 INTS5Q6P9B9 1019 aaKnown RBP9.63□□□□□ -0.87
NUMB-231ENST00000559312 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 TSPYL6Q8N831 410 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 ESYT1Q9BSJ8 1104 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 ETNK1Q9HBU6 452 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 RAB6BQ9NRW1 208 aa9.63□□□□□ -0.87
NUMB-231ENST00000559312 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
NUMB-231ENST00000559312 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
NUMB-231ENST00000559312 ELL2O00472 640 aaPredicted RBP9.62□□□□□ -0.87
NUMB-231ENST00000559312 ZBTB7BO15156 539 aaPredicted RBP9.62□□□□□ -0.87
NUMB-231ENST00000559312 VAMP4O75379 141 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 IL2RAP01589 272 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 EIF2S2P20042 333 aaKnown RBP9.62□□□□□ -0.87
NUMB-231ENST00000559312 CTSOP43234 321 aaPredicted RBP9.62□□□□□ -0.87
NUMB-231ENST00000559312 SCNN1DP51172 638 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 GDF10P55107 478 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 CLDN10P78369 228 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 ZNF827Q17R98 1081 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 NPM2Q86SE8 214 aaKnown RBP9.62□□□□□ -0.87
NUMB-231ENST00000559312 CNKSR1Q969H4 720 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 YTHDC1Q96MU7 727 aaKnown RBP9.62□□□□□ -0.87
NUMB-231ENST00000559312 TFCP2L1Q9NZI6 479 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 ZBTB1Q9Y2K1 713 aa9.62□□□□□ -0.87
NUMB-231ENST00000559312 INHAP05111 366 aa9.61□□□□□ -0.87
NUMB-231ENST00000559312 GPC1P35052 558 aa9.61□□□□□ -0.87
NUMB-231ENST00000559312 EIF5P55010 431 aaKnown RBP9.61□□□□□ -0.87
NUMB-231ENST00000559312 DDX21Q9NR30 783 aaKnown RBP eCLIP9.61□□□□□ -0.87
NUMB-231ENST00000559312 TUBGCP6Q96RT7 1819 aa9.61□□□□□ -0.87
NUMB-231ENST00000559312 A0A087WZG4 1122 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 FAM196BA6NMK8 535 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 POTECB2RU33 542 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 STAU1O95793 577 aaKnown RBP9.6□□□□□ -0.87
NUMB-231ENST00000559312 A1BGP04217 495 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 CANXP27824 592 aaKnown RBP9.6□□□□□ -0.87
NUMB-231ENST00000559312 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
NUMB-231ENST00000559312 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 ZNF787Q6DD87 383 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 NBPF10Q6P3W6 841 aaKnown RBP9.6□□□□□ -0.87
NUMB-231ENST00000559312 NBPF15Q8N660 670 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 STK31Q9BXU1 1019 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 HYPKQ9NX55 129 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 KIAA1024Q9UPX6 916 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 COL15A1P39059 1388 aa9.6□□□□□ -0.87
NUMB-231ENST00000559312 TMEM229AB2RXF0 380 aa9.59□□□□□ -0.87
NUMB-231ENST00000559312 ALDH1L2Q3SY69 923 aa9.59□□□□□ -0.87
NUMB-231ENST00000559312 FOXD4L5Q5VV16 416 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms