RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 BMP2KLQ5H9B9 411 aa18.01■□□□□ 0.47
SNRPA1-207ENST00000559309 DNAJC5GQ8N7S2 189 aa18.01■□□□□ 0.47
SNRPA1-207ENST00000559309 FAM163AQ96GL9 167 aaPredicted RBP18.01■□□□□ 0.47
SNRPA1-207ENST00000559309 ZBED3Q96IU2 234 aaPredicted RBP18.01■□□□□ 0.47
SNRPA1-207ENST00000559309 ADAMTSL1Q8N6G6 1762 aa18.01■□□□□ 0.47
SNRPA1-207ENST00000559309 TCRBV5S4A2TA0A5A2 114 aa18■□□□□ 0.47
SNRPA1-207ENST00000559309 POTECB2RU33 542 aa18■□□□□ 0.47
SNRPA1-207ENST00000559309 GOLIM4O00461 696 aa18■□□□□ 0.47
SNRPA1-207ENST00000559309 FRAT2O75474 233 aaPredicted RBP18■□□□□ 0.47
SNRPA1-207ENST00000559309 DDNO94850 711 aaPredicted RBP18■□□□□ 0.47
SNRPA1-207ENST00000559309 MTMR14Q8NCE2 650 aa18■□□□□ 0.47
SNRPA1-207ENST00000559309 EVI5LQ96CN4 794 aa18■□□□□ 0.47
SNRPA1-207ENST00000559309 ZBTB12Q9Y330 459 aaPredicted RBP18■□□□□ 0.47
SNRPA1-207ENST00000559309 GAKO14976 1311 aa17.99■□□□□ 0.47
SNRPA1-207ENST00000559309 GMPSP49915 693 aaPredicted RBP17.99■□□□□ 0.47
SNRPA1-207ENST00000559309 SPTY2D1Q68D10 685 aaPredicted RBP17.99■□□□□ 0.47
SNRPA1-207ENST00000559309 DNAJC2Q99543 621 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-207ENST00000559309 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
SNRPA1-207ENST00000559309 NMRK2Q9NPI5 230 aa17.99■□□□□ 0.47
SNRPA1-207ENST00000559309 MYH2Q9UKX2 1941 aa17.99■□□□□ 0.47
SNRPA1-207ENST00000559309 ECM29Q5VYK3 1845 aa17.98■□□□□ 0.47
SNRPA1-207ENST00000559309 SDSP20132 328 aa17.98■□□□□ 0.47
SNRPA1-207ENST00000559309 MECOMQ03112 1051 aa17.98■□□□□ 0.47
SNRPA1-207ENST00000559309 HHIPL2Q6UWX4 724 aa17.98■□□□□ 0.47
SNRPA1-207ENST00000559309 GPRC5DQ9NZD1 345 aa17.98■□□□□ 0.47
SNRPA1-207ENST00000559309 SERPINA10Q9UK55 444 aa17.98■□□□□ 0.47
SNRPA1-207ENST00000559309 LDHBP07195 334 aaKnown RBP17.97■□□□□ 0.47
SNRPA1-207ENST00000559309 ADD2P35612 726 aa17.97■□□□□ 0.47
SNRPA1-207ENST00000559309 RGS3P49796 1198 aa17.97■□□□□ 0.47
SNRPA1-207ENST00000559309 DPY19L2Q6NUT2 758 aa17.97■□□□□ 0.47
SNRPA1-207ENST00000559309 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
SNRPA1-207ENST00000559309 RBM46Q8TBY0 533 aaKnown RBP17.97■□□□□ 0.47
SNRPA1-207ENST00000559309 ABCF2Q9UG63 623 aa17.97■□□□□ 0.47
SNRPA1-207ENST00000559309 MAST3O60307 1309 aa17.97■□□□□ 0.47
SNRPA1-207ENST00000559309 MAP4K4O95819 1239 aaPredicted RBP17.96■□□□□ 0.47
SNRPA1-207ENST00000559309 USP17L8P0C7I0 530 aa17.96■□□□□ 0.47
SNRPA1-207ENST00000559309 UBE3CQ15386 1083 aa17.96■□□□□ 0.47
SNRPA1-207ENST00000559309 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
SNRPA1-207ENST00000559309 TTF2Q9UNY4 1162 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-207ENST00000559309 SHTN1A0MZ66 631 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 CHGBP05060 677 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 PDE6AP16499 860 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 MAP3K12Q12852 859 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 ADGRA1Q86SQ6 560 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 CNTROBQ8N137 903 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 ZDHHC15Q96MV8 337 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 LRP2BPQ9P2M1 347 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 CNOT7Q9UIV1 285 aaKnown RBP17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 GJA3Q9Y6H8 435 aa17.95■□□□□ 0.46
SNRPA1-207ENST00000559309 FOCADQ5VW36 1801 aa17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 ZFYP08048 801 aaPredicted RBP17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 PPP4CP60510 307 aa17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 DIXDC1Q155Q3 683 aa17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 APOBEC3HQ6NTF7 200 aaKnown RBP17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 DAGLAQ9Y4D2 1042 aa17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 CDK5RAP2Q96SN8 1893 aa17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 MROH7-TTC4A0A0A0MT08 1334 aa17.94■□□□□ 0.46
SNRPA1-207ENST00000559309 GPR75-ASB3A0A0A6YYF3 556 aa17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 RNF113AO15541 343 aaKnown RBP17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 IDH1O75874 414 aaKnown RBP17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 EGFRP00533 1210 aa17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 EPS15P42566 896 aa17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 CRKP46108 304 aa17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 FSTL1Q12841 308 aa17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 ZMYM1Q5SVZ6 1142 aa17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 SLC9C2Q5TAH2 1124 aa17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 MICALL2Q8IY33 904 aa17.93■□□□□ 0.46
SNRPA1-207ENST00000559309 ZSCAN25Q6NSZ9 544 aa17.92■□□□□ 0.46
SNRPA1-207ENST00000559309 RIOK1Q9BRS2 568 aaKnown RBP17.92■□□□□ 0.46
SNRPA1-207ENST00000559309 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.92■□□□□ 0.46
SNRPA1-207ENST00000559309 MYOZ2Q9NPC6 264 aa17.92■□□□□ 0.46
SNRPA1-207ENST00000559309 RAI14Q9P0K7 980 aa17.92■□□□□ 0.46
SNRPA1-207ENST00000559309 ZNF532Q9HCE3 1301 aa17.92■□□□□ 0.46
SNRPA1-207ENST00000559309 SPDYE2BA6NHP3 402 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 SPDYE6P0CI01 402 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 HIRAP54198 1017 aaPredicted RBP17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 RHBDL3P58872 404 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 GSTO1P78417 241 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 SLFNL1Q499Z3 407 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 NAA16Q6N069 864 aaPredicted RBP17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 DZIP1Q86YF9 867 aaKnown RBP17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 MAGEB6Q8N7X4 407 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 TEKT1Q969V4 418 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 FSD1Q9BTV5 496 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 ADARB2Q9NS39 739 aaKnown RBP17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 PGAP2Q9UHJ9 254 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 HDAC9Q9UKV0 1011 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 PCDHAC2Q9Y5I4 1007 aa17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 DDX60LQ5H9U9 1706 aaKnown RBP17.91■□□□□ 0.46
SNRPA1-207ENST00000559309 TRIM6-TRIM34B2RNG4 842 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 WNT10BO00744 389 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 LDHCP07864 332 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 CHMLP26374 656 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 CFAP100Q494V2 611 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 SLF2Q8IX21 1173 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 OGFOD1Q8N543 542 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 TRPM4Q8TD43 1214 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 APPBP2Q92624 585 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms