RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 SPDYE2Q495Y8 402 aa22.1■■□□□ 1.13
TPM1-218ENST00000559281 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
TPM1-218ENST00000559281 SLC10A4Q96EP9 437 aa22.1■■□□□ 1.13
TPM1-218ENST00000559281 TDRD3Q9H7E2 651 aaKnown RBP22.1■■□□□ 1.13
TPM1-218ENST00000559281 GNL3LQ9NVN8 582 aaKnown RBP22.1■■□□□ 1.13
TPM1-218ENST00000559281 MAST3O60307 1309 aa22.09■■□□□ 1.13
TPM1-218ENST00000559281 TNNI2P48788 182 aa22.09■■□□□ 1.13
TPM1-218ENST00000559281 MAP3K11Q16584 847 aa22.09■■□□□ 1.13
TPM1-218ENST00000559281 WDR66Q8TBY9 1149 aa22.09■■□□□ 1.13
TPM1-218ENST00000559281 TEKT1Q969V4 418 aa22.09■■□□□ 1.13
TPM1-218ENST00000559281 COPRSQ9NQ92 184 aa22.09■■□□□ 1.13
TPM1-218ENST00000559281 IREB2P48200 963 aaKnown RBP22.08■■□□□ 1.13
TPM1-218ENST00000559281 TM4SF4P48230 202 aa22.08■■□□□ 1.13
TPM1-218ENST00000559281 SREBF2Q12772 1141 aa22.08■■□□□ 1.13
TPM1-218ENST00000559281 ATP2B3Q16720 1220 aa22.08■■□□□ 1.13
TPM1-218ENST00000559281 NBPF12Q5TAG4 269 aaPredicted RBP22.08■■□□□ 1.13
TPM1-218ENST00000559281 A0A1B0GUL6 1792 aa22.07■■□□□ 1.12
TPM1-218ENST00000559281 BCAR3O75815 825 aa22.07■■□□□ 1.12
TPM1-218ENST00000559281 TRIM27P14373 513 aa22.07■■□□□ 1.12
TPM1-218ENST00000559281 SPRYD7Q5W111 196 aa22.06■■□□□ 1.12
TPM1-218ENST00000559281 TMOD2Q9NZR1 351 aa22.06■■□□□ 1.12
TPM1-218ENST00000559281 AOX1Q06278 1338 aa22.06■■□□□ 1.12
TPM1-218ENST00000559281 TCP10L2B9ZVM9 353 aa22.05■■□□□ 1.12
TPM1-218ENST00000559281 SRGAP3O43295 1099 aa22.05■■□□□ 1.12
TPM1-218ENST00000559281 INHBEP58166 350 aa22.05■■□□□ 1.12
TPM1-218ENST00000559281 MKRN3Q13064 507 aaKnown RBP22.05■■□□□ 1.12
TPM1-218ENST00000559281 DGKZQ13574 1117 aa22.05■■□□□ 1.12
TPM1-218ENST00000559281 GRIK5Q16478 980 aa22.05■■□□□ 1.12
TPM1-218ENST00000559281 ZKSCAN2Q63HK3 967 aa22.05■■□□□ 1.12
TPM1-218ENST00000559281 ZDHHC15Q96MV8 337 aa22.05■■□□□ 1.12
TPM1-218ENST00000559281 PA2G4Q9UQ80 394 aaKnown RBP22.05■■□□□ 1.12
TPM1-218ENST00000559281 GNAI2P04899 355 aa22.04■■□□□ 1.12
TPM1-218ENST00000559281 MTX1Q13505 466 aa22.04■■□□□ 1.12
TPM1-218ENST00000559281 HHIPL2Q6UWX4 724 aa22.04■■□□□ 1.12
TPM1-218ENST00000559281 ANKRD13AQ8IZ07 590 aa22.04■■□□□ 1.12
TPM1-218ENST00000559281 CLUAP1Q96AJ1 413 aa22.04■■□□□ 1.12
TPM1-218ENST00000559281 MCOLN1Q9GZU1 580 aa22.04■■□□□ 1.12
TPM1-218ENST00000559281 FZD1Q9UP38 647 aa22.04■■□□□ 1.12
TPM1-218ENST00000559281 MANSC4A6NHS7 340 aaPredicted RBP22.03■■□□□ 1.12
TPM1-218ENST00000559281 SEMA3EO15041 775 aa22.03■■□□□ 1.12
TPM1-218ENST00000559281 USP2O75604 605 aaPredicted RBP22.03■■□□□ 1.12
TPM1-218ENST00000559281 ZBTB48P10074 688 aaPredicted RBP22.03■■□□□ 1.12
TPM1-218ENST00000559281 DENND2AQ9ULE3 1009 aa22.03■■□□□ 1.12
TPM1-218ENST00000559281 AKAP2Q9Y2D5 859 aa22.03■■□□□ 1.12
TPM1-218ENST00000559281 ALDH1A1P00352 501 aa22.02■■□□□ 1.12
TPM1-218ENST00000559281 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.02■■□□□ 1.12
TPM1-218ENST00000559281 CCDC85CA6NKD9 419 aa22.01■■□□□ 1.11
TPM1-218ENST00000559281 FKBP1CQ5VVH2 108 aa22.01■■□□□ 1.11
TPM1-218ENST00000559281 HOOK2Q96ED9 719 aa22.01■■□□□ 1.11
TPM1-218ENST00000559281 TBC1D8O95759 1140 aa22■■□□□ 1.11
TPM1-218ENST00000559281 LDHBP07195 334 aaKnown RBP22■■□□□ 1.11
TPM1-218ENST00000559281 APOBEC3HQ6NTF7 200 aaKnown RBP22■■□□□ 1.11
TPM1-218ENST00000559281 FAM83AQ86UY5 434 aa22■■□□□ 1.11
TPM1-218ENST00000559281 ZGPATQ8N5A5 531 aaKnown RBP22■■□□□ 1.11
TPM1-218ENST00000559281 WNK4Q96J92 1243 aa22■■□□□ 1.11
TPM1-218ENST00000559281 CLMNQ96JQ2 1002 aa22■■□□□ 1.11
TPM1-218ENST00000559281 TEPSINQ96N21 525 aa22■■□□□ 1.11
TPM1-218ENST00000559281 TMEM39BQ9GZU3 492 aa22■■□□□ 1.11
TPM1-218ENST00000559281 ZBTB22O15209 634 aa21.99■■□□□ 1.11
TPM1-218ENST00000559281 TIMM10P62072 90 aa21.99■■□□□ 1.11
TPM1-218ENST00000559281 CCDC102BQ68D86 513 aa21.99■■□□□ 1.11
TPM1-218ENST00000559281 PHKA1P46020 1223 aa21.98■■□□□ 1.11
TPM1-218ENST00000559281 G3BP1Q13283 466 aaKnown RBP eCLIP21.98■■□□□ 1.11
TPM1-218ENST00000559281 NOM1Q5C9Z4 860 aaKnown RBP21.98■■□□□ 1.11
TPM1-218ENST00000559281 OTUD7BQ6GQQ9 843 aa21.98■■□□□ 1.11
TPM1-218ENST00000559281 FTSJ3Q8IY81 847 aaKnown RBP21.98■■□□□ 1.11
TPM1-218ENST00000559281 TNNQ9UQP3 1299 aa21.98■■□□□ 1.11
TPM1-218ENST00000559281 SSC5DA1L4H1 1573 aa21.98■■□□□ 1.11
TPM1-218ENST00000559281 SALL1Q9NSC2 1324 aa21.98■■□□□ 1.11
TPM1-218ENST00000559281 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
TPM1-218ENST00000559281 CACNB3P54284 484 aa21.97■■□□□ 1.11
TPM1-218ENST00000559281 MAP3K9P80192 1104 aa21.97■■□□□ 1.11
TPM1-218ENST00000559281 TFCP2Q12800 502 aa21.97■■□□□ 1.11
TPM1-218ENST00000559281 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
TPM1-218ENST00000559281 CTU1Q7Z7A3 348 aaKnown RBP21.97■■□□□ 1.11
TPM1-218ENST00000559281 TMEM57Q8N5G2 664 aa21.97■■□□□ 1.11
TPM1-218ENST00000559281 CFHR5Q9BXR6 569 aa21.97■■□□□ 1.11
TPM1-218ENST00000559281 CSADQ9Y600 493 aa21.96■■□□□ 1.11
TPM1-218ENST00000559281 GPR25O00155 361 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 PRDX5P30044 214 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 ADORA1P30542 326 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 SPTY2D1Q68D10 685 aaPredicted RBP21.95■■□□□ 1.1
TPM1-218ENST00000559281 IFNL1Q8IU54 200 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 SLF2Q8IX21 1173 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 ZNF296Q8WUU4 475 aaPredicted RBP21.95■■□□□ 1.1
TPM1-218ENST00000559281 XAGE2Q96GT9 111 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 NEUROD6Q96NK8 337 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 ELP3Q9H9T3 547 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 CASP8AP2Q9UKL3 1982 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 ZBED9Q6R2W3 1325 aa21.95■■□□□ 1.1
TPM1-218ENST00000559281 PKN2Q16513 984 aaKnown RBP21.94■■□□□ 1.1
TPM1-218ENST00000559281 GORABQ5T7V8 394 aa21.94■■□□□ 1.1
TPM1-218ENST00000559281 DCAF15Q66K64 600 aa21.94■■□□□ 1.1
TPM1-218ENST00000559281 CDAN1Q8IWY9 1227 aa21.94■■□□□ 1.1
TPM1-218ENST00000559281 DAGLAQ9Y4D2 1042 aa21.94■■□□□ 1.1
TPM1-218ENST00000559281 PNMA6EA0A0J9YXQ4 647 aa21.93■■□□□ 1.1
TPM1-218ENST00000559281 DIXDC1Q155Q3 683 aa21.93■■□□□ 1.1
TPM1-218ENST00000559281 PDS5AQ29RF7 1337 aaKnown RBP21.93■■□□□ 1.1
TPM1-218ENST00000559281 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.93■■□□□ 1.1
TPM1-218ENST00000559281 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms