RNA–Protein interactions for RNA: ENST00000559162.5

AP3S2-209, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 357 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-209ENST00000559162 TEKT1Q969V4 418 aa12.99□□□□□ -0.33
AP3S2-209ENST00000559162 MCOLN1Q9GZU1 580 aa12.99□□□□□ -0.33
AP3S2-209ENST00000559162 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
AP3S2-209ENST00000559162 IQSEC3Q9UPP2 1182 aaPredicted RBP12.99□□□□□ -0.33
AP3S2-209ENST00000559162 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
AP3S2-209ENST00000559162 LAMB1P07942 1786 aa12.99□□□□□ -0.33
AP3S2-209ENST00000559162 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
AP3S2-209ENST00000559162 TM4SF4P48230 202 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 BCAMP50895 628 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 DGKZQ13574 1117 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 SPRYD7Q5W111 196 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 ATG9AQ7Z3C6 839 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 WDR66Q8TBY9 1149 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 MEIS3Q99687 375 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 MRIQ9BWK5 157 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 GNL3LQ9NVN8 582 aaKnown RBP12.98□□□□□ -0.33
AP3S2-209ENST00000559162 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
AP3S2-209ENST00000559162 AOX1Q06278 1338 aa12.97□□□□□ -0.33
AP3S2-209ENST00000559162 MANSC4A6NHS7 340 aaPredicted RBP12.97□□□□□ -0.33
AP3S2-209ENST00000559162 SEMA3EO15041 775 aa12.97□□□□□ -0.33
AP3S2-209ENST00000559162 NOM1Q5C9Z4 860 aaKnown RBP12.97□□□□□ -0.33
AP3S2-209ENST00000559162 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
AP3S2-209ENST00000559162 ZDHHC15Q96MV8 337 aa12.97□□□□□ -0.33
AP3S2-209ENST00000559162 SIL1Q9H173 461 aa12.97□□□□□ -0.33
AP3S2-209ENST00000559162 TDRD3Q9H7E2 651 aaKnown RBP12.97□□□□□ -0.33
AP3S2-209ENST00000559162 TMOD2Q9NZR1 351 aa12.97□□□□□ -0.33
AP3S2-209ENST00000559162 OTOFQ9HC10 1997 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 ZBTB22O15209 634 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 ALDH1A1P00352 501 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 TRIM27P14373 513 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 INHBEP58166 350 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 MTX1Q13505 466 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 ATF7IPQ6VMQ6 1270 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 ANKRD13AQ8IZ07 590 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 SLC10A4Q96EP9 437 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 CFHR5Q9BXR6 569 aa12.96□□□□□ -0.33
AP3S2-209ENST00000559162 RPAP1Q9BWH6 1393 aaPredicted RBP12.95□□□□□ -0.34
AP3S2-209ENST00000559162 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
AP3S2-209ENST00000559162 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
AP3S2-209ENST00000559162 GRIK5Q16478 980 aa12.95□□□□□ -0.34
AP3S2-209ENST00000559162 FKBP1CQ5VVH2 108 aa12.95□□□□□ -0.34
AP3S2-209ENST00000559162 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
AP3S2-209ENST00000559162 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
AP3S2-209ENST00000559162 HOOK2Q96ED9 719 aa12.95□□□□□ -0.34
AP3S2-209ENST00000559162 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
AP3S2-209ENST00000559162 FZD1Q9UP38 647 aa12.95□□□□□ -0.34
AP3S2-209ENST00000559162 SALL1Q9NSC2 1324 aa12.94□□□□□ -0.34
AP3S2-209ENST00000559162 CCDC85CA6NKD9 419 aa12.94□□□□□ -0.34
AP3S2-209ENST00000559162 TCP10L2B9ZVM9 353 aa12.94□□□□□ -0.34
AP3S2-209ENST00000559162 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
AP3S2-209ENST00000559162 CTU1Q7Z7A3 348 aaKnown RBP12.94□□□□□ -0.34
AP3S2-209ENST00000559162 FAM83AQ86UY5 434 aa12.94□□□□□ -0.34
AP3S2-209ENST00000559162 FRAT1Q92837 279 aaPredicted RBP12.94□□□□□ -0.34
AP3S2-209ENST00000559162 TEPSINQ96N21 525 aa12.94□□□□□ -0.34
AP3S2-209ENST00000559162 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
AP3S2-209ENST00000559162 USP2O75604 605 aaPredicted RBP12.93□□□□□ -0.34
AP3S2-209ENST00000559162 GNAI2P04899 355 aa12.93□□□□□ -0.34
AP3S2-209ENST00000559162 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
AP3S2-209ENST00000559162 APOBEC3HQ6NTF7 200 aaKnown RBP12.93□□□□□ -0.34
AP3S2-209ENST00000559162 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
AP3S2-209ENST00000559162 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
AP3S2-209ENST00000559162 TMEM39BQ9GZU3 492 aa12.93□□□□□ -0.34
AP3S2-209ENST00000559162 PA2G4Q9UQ80 394 aaKnown RBP12.93□□□□□ -0.34
AP3S2-209ENST00000559162 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
AP3S2-209ENST00000559162 PDS5AQ29RF7 1337 aaKnown RBP12.92□□□□□ -0.34
AP3S2-209ENST00000559162 BCAR3O75815 825 aa12.92□□□□□ -0.34
AP3S2-209ENST00000559162 TBC1D8O95759 1140 aa12.92□□□□□ -0.34
AP3S2-209ENST00000559162 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
AP3S2-209ENST00000559162 OTUD7BQ6GQQ9 843 aa12.92□□□□□ -0.34
AP3S2-209ENST00000559162 MIER1Q8N108 512 aa12.92□□□□□ -0.34
AP3S2-209ENST00000559162 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
AP3S2-209ENST00000559162 CSADQ9Y600 493 aa12.92□□□□□ -0.34
AP3S2-209ENST00000559162 GPR25O00155 361 aa12.91□□□□□ -0.34
AP3S2-209ENST00000559162 LDHBP07195 334 aaKnown RBP12.91□□□□□ -0.34
AP3S2-209ENST00000559162 PHKA1P46020 1223 aa12.91□□□□□ -0.34
AP3S2-209ENST00000559162 MAP3K9P80192 1104 aa12.91□□□□□ -0.34
AP3S2-209ENST00000559162 MVPQ14764 893 aaKnown RBP12.91□□□□□ -0.34
AP3S2-209ENST00000559162 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
AP3S2-209ENST00000559162 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
AP3S2-209ENST00000559162 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
AP3S2-209ENST00000559162 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
AP3S2-209ENST00000559162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.34
AP3S2-209ENST00000559162 DAGLAQ9Y4D2 1042 aa12.91□□□□□ -0.34
AP3S2-209ENST00000559162 ZBED9Q6R2W3 1325 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 FKTNO75072 461 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 PRDX5P30044 214 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 CACNB3P54284 484 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 VGLL4Q14135 290 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.9□□□□□ -0.34
AP3S2-209ENST00000559162 FTSJ3Q8IY81 847 aaKnown RBP12.9□□□□□ -0.34
AP3S2-209ENST00000559162 CLUAP1Q96AJ1 413 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 OPTNQ96CV9 577 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 ELP3Q9H9T3 547 aa12.9□□□□□ -0.34
AP3S2-209ENST00000559162 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
AP3S2-209ENST00000559162 IGF2BP3O00425 579 aaKnown RBP eCLIP12.89□□□□□ -0.35
AP3S2-209ENST00000559162 ADORA1P30542 326 aa12.89□□□□□ -0.35
AP3S2-209ENST00000559162 RGS19P49795 217 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms