RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 CCDC87Q9NVE4 849 aa7.69□□□□□ -1.18
CASC4-207ENST00000559037 CLTCQ00610 1675 aaKnown RBP7.69□□□□□ -1.18
CASC4-207ENST00000559037 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 KRBA1A5PL33 1030 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 J3QW42 95 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 CEP120Q8N960 986 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 DMRTB1Q96MA1 342 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 FAM129BQ96TA1 746 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 SALL4Q9UJQ4 1053 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 CNTLNQ9NXG0 1405 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 CAMSAP2Q08AD1 1489 aa7.68□□□□□ -1.18
CASC4-207ENST00000559037 FAM177BA6PVY3 158 aa7.67□□□□□ -1.18
CASC4-207ENST00000559037 COL13A1Q5TAT6 717 aaPredicted RBP7.67□□□□□ -1.18
CASC4-207ENST00000559037 FMR1NBQ8N0W7 255 aaPredicted RBP7.67□□□□□ -1.18
CASC4-207ENST00000559037 RBCK1Q9BYM8 510 aa7.67□□□□□ -1.18
CASC4-207ENST00000559037 PBX4Q9BYU1 374 aa7.67□□□□□ -1.18
CASC4-207ENST00000559037 CHRDQ9H2X0 955 aa7.67□□□□□ -1.18
CASC4-207ENST00000559037 CNTN3Q9P232 1028 aa7.67□□□□□ -1.18
CASC4-207ENST00000559037 AMOTL2Q9Y2J4 779 aa7.67□□□□□ -1.18
CASC4-207ENST00000559037 ZMYM3Q14202 1370 aa7.67□□□□□ -1.18
CASC4-207ENST00000559037 DHX29Q7Z478 1369 aaKnown RBP7.67□□□□□ -1.18
CASC4-207ENST00000559037 CCDC141Q6ZP82 1450 aa7.67□□□□□ -1.18
CASC4-207ENST00000559037 MSTNO14793 375 aa7.66□□□□□ -1.18
CASC4-207ENST00000559037 CYP2E1P05181 493 aaPredicted RBP7.66□□□□□ -1.18
CASC4-207ENST00000559037 NRG1Q02297 640 aaPredicted RBP7.66□□□□□ -1.18
CASC4-207ENST00000559037 GGT6Q6P531 493 aa7.66□□□□□ -1.18
CASC4-207ENST00000559037 MIA2Q96PC5 1412 aa7.66□□□□□ -1.18
CASC4-207ENST00000559037 A6NHS1 94 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 C9orf172C9J069 976 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 TSPY4P0CV99 314 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 TSPY10P0CW01 314 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 PDIA4P13667 645 aaKnown RBP7.65□□□□□ -1.18
CASC4-207ENST00000559037 PTPRAP18433 802 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 SUZ12Q15022 739 aaKnown RBP7.65□□□□□ -1.18
CASC4-207ENST00000559037 MYOM3Q5VTT5 1437 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 GPAT2Q6NUI2 795 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 FBXO11Q86XK2 927 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 DMRTC2Q8IXT2 367 aaPredicted RBP7.65□□□□□ -1.18
CASC4-207ENST00000559037 ALKBH8Q96BT7 664 aaKnown RBP7.65□□□□□ -1.18
CASC4-207ENST00000559037 KANSL3Q9P2N6 904 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 DCTN4Q9UJW0 460 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 MAST1Q9Y2H9 1570 aa7.65□□□□□ -1.18
CASC4-207ENST00000559037 NPATQ14207 1427 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 KIF3BO15066 747 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 ATP11AP98196 1134 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 CEP135Q66GS9 1140 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 GDF6Q6KF10 455 aaPredicted RBP7.64□□□□□ -1.19
CASC4-207ENST00000559037 IL22RA1Q8N6P7 574 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 DNAJC25Q9H1X3 360 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 RASSF4Q9H2L5 321 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 BIN2Q9UBW5 565 aaPredicted RBP7.64□□□□□ -1.19
CASC4-207ENST00000559037 PPME1Q9Y570 386 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 IVNS1ABPQ9Y6Y0 642 aa7.64□□□□□ -1.19
CASC4-207ENST00000559037 UHRF1BP1Q6BDS2 1440 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 CDC27P30260 824 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 BAG6P46379 1132 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 CD163Q86VB7 1156 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 TMEM102Q8N9M5 508 aaPredicted RBP7.63□□□□□ -1.19
CASC4-207ENST00000559037 LENG1Q96BZ8 264 aaPredicted RBP7.63□□□□□ -1.19
CASC4-207ENST00000559037 SPOCK3Q9BQ16 436 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 ADAM19Q9H013 955 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 ZFYVE28Q9HCC9 887 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 DZANK1Q9NVP4 752 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 FOXD3Q9UJU5 478 aaPredicted RBP7.63□□□□□ -1.19
CASC4-207ENST00000559037 TRIM33Q9UPN9 1127 aa7.63□□□□□ -1.19
CASC4-207ENST00000559037 PTPRKQ15262 1439 aa7.62□□□□□ -1.19
CASC4-207ENST00000559037 C1QTNF9BB2RNN3 333 aa7.62□□□□□ -1.19
CASC4-207ENST00000559037 EREGO14944 169 aa7.62□□□□□ -1.19
CASC4-207ENST00000559037 EIF4EBP3O60516 100 aaPredicted RBP7.62□□□□□ -1.19
CASC4-207ENST00000559037 FAM117BQ6P1L5 589 aa7.62□□□□□ -1.19
CASC4-207ENST00000559037 WNT8BQ93098 351 aa7.62□□□□□ -1.19
CASC4-207ENST00000559037 CROCC2H7BZ55 1655 aa7.62□□□□□ -1.19
CASC4-207ENST00000559037 PTPN23Q9H3S7 1636 aa7.62□□□□□ -1.19
CASC4-207ENST00000559037 ZNF142P52746 1687 aaPredicted RBP7.61□□□□□ -1.19
CASC4-207ENST00000559037 RNF17Q9BXT8 1623 aaKnown RBP7.61□□□□□ -1.19
CASC4-207ENST00000559037 FAM229AH3BQW9 127 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 PDE2AO00408 941 aaPredicted RBP7.61□□□□□ -1.19
CASC4-207ENST00000559037 PROCP04070 461 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 ITGB2P05107 769 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 CHRNA4P43681 627 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 CABP4P57796 275 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 IGF2-ASQ6U949 168 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 TMC1Q8TDI8 760 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 OSMRQ99650 979 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 ABCC5O15440 1437 aa7.61□□□□□ -1.19
CASC4-207ENST00000559037 EIF2AK4Q9P2K8 1649 aaKnown RBP7.6□□□□□ -1.19
CASC4-207ENST00000559037 NFKBIEO00221 500 aa7.6□□□□□ -1.19
CASC4-207ENST00000559037 CPNE3O75131 537 aaKnown RBP7.6□□□□□ -1.19
CASC4-207ENST00000559037 GALNT12Q8IXK2 581 aa7.6□□□□□ -1.19
CASC4-207ENST00000559037 FBXO41Q8TF61 875 aa7.6□□□□□ -1.19
CASC4-207ENST00000559037 POP1Q99575 1024 aaKnown RBP7.6□□□□□ -1.19
CASC4-207ENST00000559037 BHLHE41Q9C0J9 482 aaPredicted RBP7.6□□□□□ -1.19
CASC4-207ENST00000559037 FAM135AQ9P2D6 1515 aa7.6□□□□□ -1.19
CASC4-207ENST00000559037 PTPRTO14522 1441 aa7.6□□□□□ -1.19
CASC4-207ENST00000559037 DNMT1P26358 1616 aaKnown RBP7.6□□□□□ -1.19
CASC4-207ENST00000559037 CAMSAP1Q5T5Y3 1602 aa7.6□□□□□ -1.19
CASC4-207ENST00000559037 MYO3AQ8NEV4 1616 aa7.6□□□□□ -1.19
CASC4-207ENST00000559037 WASHC2CQ9Y4E1 1318 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms