RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 HLA-CQ95604 372 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 CDC5LQ99459 802 aaKnown RBP7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 SRCIN1Q9C0H9 1055 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 SMC4Q9NTJ3 1288 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 SCN9AQ15858 1988 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 IQCA1LA6NCM1 817 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 YDJCA8MPS7 323 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 LILRB3O75022 631 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 ITGA6P23229 1130 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 EIF6P56537 245 aaKnown RBP7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 HNRNPUQ00839 825 aaKnown RBP eCLIP7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 GUCA2AQ02747 115 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 FSTL1Q12841 308 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 TUSC1Q2TAM9 212 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 EPHA10Q5JZY3 1008 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 TBC1D16Q8TBP0 767 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 TAF1DQ9H5J8 278 aaPredicted RBP7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 ZNRF3Q9ULT6 936 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 COG6Q9Y2V7 657 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 GJA3Q9Y6H8 435 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 A0A1B0GUL6 1792 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 UTYO14607 1347 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 FAM205CA6NFA0 338 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 C6orf229H3BNL8 230 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 HOXA2O43364 376 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 UFL1O94874 794 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 SCNN1DP51172 638 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 RARSP54136 660 aaKnown RBP7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 CXCL9Q07325 125 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 WASHC4Q2M389 1173 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 SMC1BQ8NDV3 1235 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 KAZALD1Q96I82 304 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 SUCLG2Q96I99 432 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 SLC4A5Q9BY07 1137 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 BSDC1Q9NW68 430 aaPredicted RBP7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 HACL1Q9UJ83 578 aa7.61□□□□□ -1.19
CTDSPL2-204ENST00000558966 XDHP47989 1333 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 WTIPA6NIX2 430 aaPredicted RBP7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 AP1G2O75843 785 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 RAD17O75943 681 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 NBPF7P0C2Y1 421 aaPredicted RBP7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 LMBR1LQ6UX01 489 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 DBNDD1Q9H9R9 158 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 C9orf78Q9NZ63 289 aaPredicted RBP7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 GGA1Q9UJY5 639 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 MINPP1Q9UNW1 487 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 VPS9D1Q9Y2B5 631 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 PSME4Q14997 1843 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 FDX1P10109 184 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 EPHX2P34913 555 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 GJA5P36382 358 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 IGHMBP2P38935 993 aaKnown RBP7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 EPS15P42566 896 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 CIAPIN1Q6FI81 312 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 SAMD7Q7Z3H4 446 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 MTMR14Q8NCE2 650 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 EYA3Q99504 573 aa7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 NOB1Q9ULX3 412 aaKnown RBP7.6□□□□□ -1.19
CTDSPL2-204ENST00000558966 ZNF646O15015 1829 aaPredicted RBP7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 ANKRD18BA2A2Z9 1011 aa7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 ECE2O60344 883 aa7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 ATP2B4P23634 1241 aa7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 GMPSP49915 693 aaPredicted RBP7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 USP46P62068 366 aa7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 LDHDQ86WU2 507 aa7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 KCNQ5Q9NR82 932 aa7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 PCDHGC3Q9UN70 934 aa7.59□□□□□ -1.19
CTDSPL2-204ENST00000558966 ZBED9Q6R2W3 1325 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 PCNTO95613 3336 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 RNF40O75150 1001 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 CCT4P50991 539 aaKnown RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 APLP1P51693 650 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 HTRA3P83110 453 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 IFIT5Q13325 482 aaKnown RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 RABL6Q3YEC7 729 aaPredicted RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 EAPPQ56P03 285 aaPredicted RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 ZNF687Q8N1G0 1237 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 CCDC82Q8N4S0 544 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 ANKRD44Q8N8A2 993 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 MPHOSPH8Q99549 860 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 ZC3H12CQ9C0D7 883 aaKnown RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 USP44Q9H0E7 712 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 BICC1Q9H694 974 aaKnown RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 GPRC5DQ9NZD1 345 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 CHMP3Q9Y3E7 222 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 MED23Q9ULK4 1368 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 KIF16BQ96L93 1317 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 SHTN1A0MZ66 631 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 PSMD14O00487 310 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 KLRK1P26718 216 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 LMOD1P29536 600 aaPredicted RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 PBX2P40425 430 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 CHRNDQ07001 517 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 TNIP1Q15025 636 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 PNMA8AQ86V59 439 aaPredicted RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 TXNRD3Q86VQ6 643 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 ZNF594Q96JF6 807 aaPredicted RBP7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 GDPD2Q9HCC8 539 aa7.58□□□□□ -1.2
CTDSPL2-204ENST00000558966 IRS2Q9Y4H2 1338 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms