RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SPDYE5A6NIY4 337 aa15.42■□□□□ 0.06
SMAD3-206ENST00000558739 IRF6O14896 467 aa15.42■□□□□ 0.06
SMAD3-206ENST00000558739 MYO1BO43795 1136 aa15.42■□□□□ 0.06
SMAD3-206ENST00000558739 RBM5P52756 815 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMAD3-206ENST00000558739 PRMT2P55345 433 aa15.42■□□□□ 0.06
SMAD3-206ENST00000558739 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
SMAD3-206ENST00000558739 LEMD3Q9Y2U8 911 aa15.42■□□□□ 0.06
SMAD3-206ENST00000558739 FMNL1O95466 1100 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-206ENST00000558739 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
SMAD3-206ENST00000558739 SYN1P17600 705 aa15.41■□□□□ 0.06
SMAD3-206ENST00000558739 TMPOP42166 694 aaKnown RBP15.41■□□□□ 0.06
SMAD3-206ENST00000558739 MAP3K9P80192 1104 aa15.41■□□□□ 0.06
SMAD3-206ENST00000558739 SPDYE2Q495Y8 402 aa15.41■□□□□ 0.06
SMAD3-206ENST00000558739 C7orf61Q8IZ16 206 aa15.41■□□□□ 0.06
SMAD3-206ENST00000558739 GUCD1Q96NT3 240 aa15.41■□□□□ 0.06
SMAD3-206ENST00000558739 PRDM6Q9NQX0 595 aa15.41■□□□□ 0.06
SMAD3-206ENST00000558739 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-206ENST00000558739 GABRQQ9UN88 632 aa15.41■□□□□ 0.06
SMAD3-206ENST00000558739 DOCK3Q8IZD9 2030 aa15.4■□□□□ 0.06
SMAD3-206ENST00000558739 TCP10L2B9ZVM9 353 aa15.4■□□□□ 0.06
SMAD3-206ENST00000558739 SGPL1O95470 568 aa15.4■□□□□ 0.06
SMAD3-206ENST00000558739 CETPP11597 493 aa15.4■□□□□ 0.06
SMAD3-206ENST00000558739 ELNP15502 786 aa15.4■□□□□ 0.06
SMAD3-206ENST00000558739 DUSP27Q5VZP5 1158 aa15.4■□□□□ 0.06
SMAD3-206ENST00000558739 ZKSCAN4Q969J2 545 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-206ENST00000558739 PAWRQ96IZ0 340 aaKnown RBP15.4■□□□□ 0.06
SMAD3-206ENST00000558739 TDRD3Q9H7E2 651 aaKnown RBP15.4■□□□□ 0.06
SMAD3-206ENST00000558739 RAPGEFL1Q9UHV5 662 aa15.4■□□□□ 0.06
SMAD3-206ENST00000558739 CSADQ9Y600 493 aa15.4■□□□□ 0.06
SMAD3-206ENST00000558739 BMP8BP34820 402 aa15.39■□□□□ 0.05
SMAD3-206ENST00000558739 MAGEA10P43363 369 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-206ENST00000558739 NEUROD2Q15784 382 aa15.39■□□□□ 0.05
SMAD3-206ENST00000558739 LRIT3Q3SXY7 679 aa15.39■□□□□ 0.05
SMAD3-206ENST00000558739 DEFB118Q96PH6 123 aa15.39■□□□□ 0.05
SMAD3-206ENST00000558739 TAF5LO75529 589 aa15.38■□□□□ 0.05
SMAD3-206ENST00000558739 IGKV5-2P06315 115 aa15.38■□□□□ 0.05
SMAD3-206ENST00000558739 HOXB7P09629 217 aa15.38■□□□□ 0.05
SMAD3-206ENST00000558739 UBXN2AP68543 259 aa15.38■□□□□ 0.05
SMAD3-206ENST00000558739 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-206ENST00000558739 ZCCHC17Q9NP64 241 aaKnown RBP15.38■□□□□ 0.05
SMAD3-206ENST00000558739 RPTORQ8N122 1335 aa15.38■□□□□ 0.05
SMAD3-206ENST00000558739 INHAP05111 366 aa15.37■□□□□ 0.05
SMAD3-206ENST00000558739 KCNJ4P48050 445 aa15.37■□□□□ 0.05
SMAD3-206ENST00000558739 CACNB3P54284 484 aa15.37■□□□□ 0.05
SMAD3-206ENST00000558739 CHRNDQ07001 517 aa15.37■□□□□ 0.05
SMAD3-206ENST00000558739 SNAPC2Q13487 334 aa15.37■□□□□ 0.05
SMAD3-206ENST00000558739 TDHQ8IZJ6 230 aa15.37■□□□□ 0.05
SMAD3-206ENST00000558739 HELBQ8NG08 1087 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-206ENST00000558739 FAM161BQ96MY7 647 aa15.37■□□□□ 0.05
SMAD3-206ENST00000558739 WRNIP1Q96S55 665 aa15.37■□□□□ 0.05
SMAD3-206ENST00000558739 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-206ENST00000558739 DDX60LQ5H9U9 1706 aaKnown RBP15.37■□□□□ 0.05
SMAD3-206ENST00000558739 PDHXO00330 501 aa15.36■□□□□ 0.05
SMAD3-206ENST00000558739 WDHD1O75717 1129 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-206ENST00000558739 TFRCP02786 760 aaKnown RBP15.36■□□□□ 0.05
SMAD3-206ENST00000558739 IGHMBP2P38935 993 aaKnown RBP15.36■□□□□ 0.05
SMAD3-206ENST00000558739 TNFAIP1Q13829 316 aa15.36■□□□□ 0.05
SMAD3-206ENST00000558739 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
SMAD3-206ENST00000558739 SLAIN1Q8ND83 568 aa15.36■□□□□ 0.05
SMAD3-206ENST00000558739 TRIM35Q9UPQ4 493 aa15.36■□□□□ 0.05
SMAD3-206ENST00000558739 ADCY3O60266 1144 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 IL1R1P14778 569 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 ITGA6P23229 1130 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 HOXD10P28358 340 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 PPIL2Q13356 520 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 MOGSQ13724 837 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 CWF19L2Q2TBE0 894 aaKnown RBP15.35■□□□□ 0.05
SMAD3-206ENST00000558739 CCDC146Q8IYE0 955 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 ANKRD2Q9GZV1 360 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 PAK6Q9NQU5 681 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-206ENST00000558739 MAP3K2Q9Y2U5 619 aa15.35■□□□□ 0.05
SMAD3-206ENST00000558739 CYP2C8P10632 490 aa15.34■□□□□ 0.05
SMAD3-206ENST00000558739 LMOD3Q0VAK6 560 aa15.34■□□□□ 0.05
SMAD3-206ENST00000558739 TRIM26Q12899 539 aaPredicted RBP15.34■□□□□ 0.05
SMAD3-206ENST00000558739 GRIK5Q16478 980 aa15.34■□□□□ 0.05
SMAD3-206ENST00000558739 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
SMAD3-206ENST00000558739 ELL2O00472 640 aaPredicted RBP15.33■□□□□ 0.04
SMAD3-206ENST00000558739 BCRP11274 1271 aa15.33■□□□□ 0.04
SMAD3-206ENST00000558739 FLT3LGP49771 235 aa15.33■□□□□ 0.04
SMAD3-206ENST00000558739 UBE3BQ7Z3V4 1068 aa15.33■□□□□ 0.04
SMAD3-206ENST00000558739 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
SMAD3-206ENST00000558739 MBIPQ9NS73 344 aa15.33■□□□□ 0.04
SMAD3-206ENST00000558739 TTF2Q9UNY4 1162 aaKnown RBP15.33■□□□□ 0.04
SMAD3-206ENST00000558739 PIEZO1Q92508 2521 aa15.33■□□□□ 0.04
SMAD3-206ENST00000558739 COL9A1P20849 921 aa15.32■□□□□ 0.04
SMAD3-206ENST00000558739 INPP5BP32019 993 aa15.32■□□□□ 0.04
SMAD3-206ENST00000558739 FCGRTP55899 365 aa15.32■□□□□ 0.04
SMAD3-206ENST00000558739 FKBP1AP62942 108 aaKnown RBP15.32■□□□□ 0.04
SMAD3-206ENST00000558739 MFSD14BQ5SR56 506 aa15.32■□□□□ 0.04
SMAD3-206ENST00000558739 ANKRD23Q86SG2 305 aa15.32■□□□□ 0.04
SMAD3-206ENST00000558739 MPHOSPH8Q99549 860 aa15.32■□□□□ 0.04
SMAD3-206ENST00000558739 UBE2OQ9C0C9 1292 aaKnown RBP15.32■□□□□ 0.04
SMAD3-206ENST00000558739 PNNQ9H307 717 aaKnown RBP15.32■□□□□ 0.04
SMAD3-206ENST00000558739 COL2A1P02458 1487 aaPredicted RBP15.32■□□□□ 0.04
SMAD3-206ENST00000558739 C15orf52Q6ZUT6 534 aaKnown RBP15.31■□□□□ 0.04
SMAD3-206ENST00000558739 ZNF804AQ7Z570 1209 aa15.31■□□□□ 0.04
SMAD3-206ENST00000558739 NECAB2Q7Z6G3 386 aa15.31■□□□□ 0.04
SMAD3-206ENST00000558739 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
SMAD3-206ENST00000558739 CRKP46108 304 aa15.3■□□□□ 0.04
SMAD3-206ENST00000558739 TAOK2Q9UL54 1235 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms