RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 MICALL2Q8IY33 904 aa12.76□□□□□ -0.37
PSMA4-207ENST00000558635 GPC2Q8N158 579 aa12.76□□□□□ -0.37
PSMA4-207ENST00000558635 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
PSMA4-207ENST00000558635 MFRPQ9BY79 579 aa12.76□□□□□ -0.37
PSMA4-207ENST00000558635 DBNLQ9UJU6 430 aaKnown RBP12.76□□□□□ -0.37
PSMA4-207ENST00000558635 TIAM2Q8IVF5 1701 aa12.76□□□□□ -0.37
PSMA4-207ENST00000558635 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
PSMA4-207ENST00000558635 VIL1P09327 827 aaKnown RBP12.75□□□□□ -0.37
PSMA4-207ENST00000558635 IFIT2P09913 472 aaKnown RBP12.75□□□□□ -0.37
PSMA4-207ENST00000558635 ANKRD45Q5TZF3 282 aa12.75□□□□□ -0.37
PSMA4-207ENST00000558635 STRIP1Q5VSL9 837 aa12.75□□□□□ -0.37
PSMA4-207ENST00000558635 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
PSMA4-207ENST00000558635 SMC5Q8IY18 1101 aa12.75□□□□□ -0.37
PSMA4-207ENST00000558635 ZNF526Q8TF50 670 aaPredicted RBP12.75□□□□□ -0.37
PSMA4-207ENST00000558635 MXD3Q9BW11 206 aa12.75□□□□□ -0.37
PSMA4-207ENST00000558635 GNL3LQ9NVN8 582 aaKnown RBP12.75□□□□□ -0.37
PSMA4-207ENST00000558635 JAG2Q9Y219 1238 aa12.75□□□□□ -0.37
PSMA4-207ENST00000558635 FAM205AQ6ZU69 1335 aa12.74□□□□□ -0.37
PSMA4-207ENST00000558635 KDM2BQ8NHM5 1336 aa12.74□□□□□ -0.37
PSMA4-207ENST00000558635 GMPSP49915 693 aaPredicted RBP12.74□□□□□ -0.37
PSMA4-207ENST00000558635 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
PSMA4-207ENST00000558635 CCDC158Q5M9N0 1113 aa12.74□□□□□ -0.37
PSMA4-207ENST00000558635 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
PSMA4-207ENST00000558635 RSBN1LQ6PCB5 846 aaPredicted RBP12.74□□□□□ -0.37
PSMA4-207ENST00000558635 ARID4AP29374 1257 aaPredicted RBP12.73□□□□□ -0.37
PSMA4-207ENST00000558635 TTC39AQ5SRH9 613 aa12.73□□□□□ -0.37
PSMA4-207ENST00000558635 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
PSMA4-207ENST00000558635 SCN9AQ15858 1988 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 SEMA3EO15041 775 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 SCNN1DP51172 638 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 RASGRF1Q13972 1273 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 SCARF1Q14162 830 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 C16orf71Q8IYS4 520 aaPredicted RBP12.72□□□□□ -0.37
PSMA4-207ENST00000558635 CERS5Q8N5B7 392 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 AGBL3Q8NEM8 1001 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 GMLQ99445 158 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 DENND2AQ9ULE3 1009 aa12.72□□□□□ -0.37
PSMA4-207ENST00000558635 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 POTECB2RU33 542 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 RPS12P25398 132 aaKnown RBP12.71□□□□□ -0.37
PSMA4-207ENST00000558635 MCAMP43121 646 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 NUCB1Q02818 461 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 PI16Q6UXB8 463 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.37
PSMA4-207ENST00000558635 WDR66Q8TBY9 1149 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 DPF2Q92785 391 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 ZNF512BQ96KM6 892 aaPredicted RBP12.71□□□□□ -0.37
PSMA4-207ENST00000558635 NMRK2Q9NPI5 230 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 HMG20BQ9P0W2 317 aa12.71□□□□□ -0.37
PSMA4-207ENST00000558635 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.38
PSMA4-207ENST00000558635 MYO3BQ8WXR4 1341 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 SHTN1A0MZ66 631 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
PSMA4-207ENST00000558635 EPS15P42566 896 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 FKBP1AP62942 108 aaKnown RBP12.7□□□□□ -0.38
PSMA4-207ENST00000558635 MFSD14BQ5SR56 506 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 CHD1LQ86WJ1 897 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 OTUD7AQ8TE49 926 aaPredicted RBP12.7□□□□□ -0.38
PSMA4-207ENST00000558635 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 LNPKQ9C0E8 428 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 GPBP1L1Q9HC44 474 aaPredicted RBP12.7□□□□□ -0.38
PSMA4-207ENST00000558635 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 GPRC5DQ9NZD1 345 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 CNOT7Q9UIV1 285 aaKnown RBP12.7□□□□□ -0.38
PSMA4-207ENST00000558635 HACL1Q9UJ83 578 aa12.7□□□□□ -0.38
PSMA4-207ENST00000558635 PDS5AQ29RF7 1337 aaKnown RBP12.69□□□□□ -0.38
PSMA4-207ENST00000558635 F8W031 263 aaPredicted RBP12.69□□□□□ -0.38
PSMA4-207ENST00000558635 VEGFAP15692 232 aaPredicted RBP12.69□□□□□ -0.38
PSMA4-207ENST00000558635 GRIK5Q16478 980 aa12.69□□□□□ -0.38
PSMA4-207ENST00000558635 KIAA0825Q8IV33 1275 aa12.69□□□□□ -0.38
PSMA4-207ENST00000558635 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
PSMA4-207ENST00000558635 IQCA1LA6NCM1 817 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 H7C1D1 291 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 USP17L8P0C7I0 530 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 ZAP70P43403 619 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 GPATCH3Q96I76 525 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 TAF1DQ9H5J8 278 aaPredicted RBP12.68□□□□□ -0.38
PSMA4-207ENST00000558635 ECHDC1Q9NTX5 307 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 PPP4R2Q9NY27 417 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 NDUFB9Q9Y6M9 179 aa12.68□□□□□ -0.38
PSMA4-207ENST00000558635 SALL1Q9NSC2 1324 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
PSMA4-207ENST00000558635 ATP5JP18859 108 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 EPHX2P34913 555 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
PSMA4-207ENST00000558635 TBC1D9Q6ZT07 1266 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
PSMA4-207ENST00000558635 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.67□□□□□ -0.38
PSMA4-207ENST00000558635 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 ADARB2Q9NS39 739 aaKnown RBP12.67□□□□□ -0.38
PSMA4-207ENST00000558635 ABCF2Q9UG63 623 aa12.67□□□□□ -0.38
PSMA4-207ENST00000558635 TTF2Q9UNY4 1162 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms