RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 MEGF11A6BM72 1044 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 LDHBP07195 334 aaKnown RBP5.02□□□□□ -1.61
HERC1-203ENST00000558532 PREPP48147 710 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 ATP2B2Q01814 1243 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 DTHD1Q6ZMT9 781 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 HOMEZQ8IX15 550 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 ARMC10Q8N2F6 343 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 PCGF6Q9BYE7 350 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 CEP41Q9BYV8 373 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 SEMA6BQ9H3T3 888 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 RNF19AQ9NV58 838 aa5.02□□□□□ -1.61
HERC1-203ENST00000558532 PRPF40AO75400 957 aaKnown RBP5.01□□□□□ -1.61
HERC1-203ENST00000558532 TIAF1O95411 115 aa5.01□□□□□ -1.61
HERC1-203ENST00000558532 MAOBP27338 520 aa5.01□□□□□ -1.61
HERC1-203ENST00000558532 ZEB1P37275 1124 aaPredicted RBP5.01□□□□□ -1.61
HERC1-203ENST00000558532 UVSSAQ2YD98 709 aa5.01□□□□□ -1.61
HERC1-203ENST00000558532 ANKRD34AQ69YU3 496 aa5.01□□□□□ -1.61
HERC1-203ENST00000558532 PRR23CQ6ZRP0 262 aa5.01□□□□□ -1.61
HERC1-203ENST00000558532 FBXO33Q7Z6M2 555 aa5.01□□□□□ -1.61
HERC1-203ENST00000558532 SRCIN1Q9C0H9 1055 aa5.01□□□□□ -1.61
HERC1-203ENST00000558532 XRCC5P13010 732 aaKnown RBP5□□□□□ -1.61
HERC1-203ENST00000558532 ZNF157P51786 506 aaPredicted RBP5□□□□□ -1.61
HERC1-203ENST00000558532 POU4F3Q15319 338 aa5□□□□□ -1.61
HERC1-203ENST00000558532 CCDC27Q2M243 656 aa5□□□□□ -1.61
HERC1-203ENST00000558532 PPP1R3FQ6ZSY5 799 aaPredicted RBP5□□□□□ -1.61
HERC1-203ENST00000558532 SMG8Q8ND04 991 aaKnown RBP5□□□□□ -1.61
HERC1-203ENST00000558532 C12orf49Q9H741 205 aa5□□□□□ -1.61
HERC1-203ENST00000558532 SUGCTQ9HAC7 445 aa5□□□□□ -1.61
HERC1-203ENST00000558532 GIPC1O14908 333 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 EIF4EBP3O60516 100 aaPredicted RBP4.99□□□□□ -1.61
HERC1-203ENST00000558532 CYP11A1P05108 521 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 GNA15P30679 374 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 GSTT1P30711 240 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 EAPPQ56P03 285 aaPredicted RBP4.99□□□□□ -1.61
HERC1-203ENST00000558532 PRSS36Q5K4E3 855 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 EXOSC6Q5RKV6 272 aaKnown RBP4.99□□□□□ -1.61
HERC1-203ENST00000558532 FDX2Q6P4F2 183 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 PDZD3Q86UT5 571 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 STK35Q8TDR2 534 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 UTP4Q969X6 686 aaKnown RBP4.99□□□□□ -1.61
HERC1-203ENST00000558532 MYRFLQ96LU7 910 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 DUSP9Q99956 384 aaKnown RBP4.99□□□□□ -1.61
HERC1-203ENST00000558532 GPN3Q9UHW5 284 aaPredicted RBP4.99□□□□□ -1.61
HERC1-203ENST00000558532 SPG7Q9UQ90 795 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 AKAP2Q9Y2D5 859 aa4.99□□□□□ -1.61
HERC1-203ENST00000558532 FBXO24O75426 580 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 USP17L7P0C7H9 530 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 TAGLNQ01995 201 aaKnown RBP4.98□□□□□ -1.61
HERC1-203ENST00000558532 AP3B2Q13367 1082 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 NUTM2GQ5VZR2 741 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 DDX54Q8TDD1 881 aaKnown RBP4.98□□□□□ -1.61
HERC1-203ENST00000558532 ANKRD24Q8TF21 1146 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 NECAB3Q96P71 396 aaPredicted RBP4.98□□□□□ -1.61
HERC1-203ENST00000558532 CORO1BQ9BR76 489 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 ZFYVE1Q9HBF4 777 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 CYP4F12Q9HCS2 524 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 TMEM39AQ9NV64 488 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 PPP4R2Q9NY27 417 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 FAM8A1Q9UBU6 413 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 PPM1HQ9ULR3 514 aa4.98□□□□□ -1.61
HERC1-203ENST00000558532 ENC1O14682 589 aa4.97□□□□□ -1.61
HERC1-203ENST00000558532 DHX15O43143 795 aaKnown RBP4.97□□□□□ -1.61
HERC1-203ENST00000558532 PAGE1O75459 146 aa4.97□□□□□ -1.61
HERC1-203ENST00000558532 ADH5P11766 374 aa4.97□□□□□ -1.61
HERC1-203ENST00000558532 DRD2P14416 443 aa4.97□□□□□ -1.61
HERC1-203ENST00000558532 TRIM26Q12899 539 aaPredicted RBP4.97□□□□□ -1.61
HERC1-203ENST00000558532 TPTE2Q6XPS3 522 aa4.97□□□□□ -1.61
HERC1-203ENST00000558532 FAM20CQ8IXL6 584 aa4.97□□□□□ -1.61
HERC1-203ENST00000558532 C2CD4AQ8NCU7 369 aaPredicted RBP4.97□□□□□ -1.61
HERC1-203ENST00000558532 WDR89Q96FK6 387 aaPredicted RBP4.97□□□□□ -1.61
HERC1-203ENST00000558532 WDR18Q9BV38 432 aa4.97□□□□□ -1.61
HERC1-203ENST00000558532 CCDC86Q9H6F5 360 aaKnown RBP4.97□□□□□ -1.61
HERC1-203ENST00000558532 RAXQ9Y2V3 346 aa4.97□□□□□ -1.61
HERC1-203ENST00000558532 TTBK1Q5TCY1 1321 aaPredicted RBP4.97□□□□□ -1.61
HERC1-203ENST00000558532 SART1O43290 800 aaKnown RBP4.96□□□□□ -1.62
HERC1-203ENST00000558532 ZNF862O60290 1169 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 GSTP1P09211 210 aaKnown RBP4.96□□□□□ -1.62
HERC1-203ENST00000558532 BMP3P12645 472 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 FSTP19883 344 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 PPP2R3AQ06190 1150 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 SOX4Q06945 474 aaPredicted RBP4.96□□□□□ -1.62
HERC1-203ENST00000558532 ZNF252P-AS1Q0IIN9 211 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 SGO2Q562F6 1265 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 RASIP1Q5U651 963 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 SULF2Q8IWU5 870 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 C12orf50Q8NA57 414 aaPredicted RBP4.96□□□□□ -1.62
HERC1-203ENST00000558532 FRMD6Q96NE9 622 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 ZC3H12CQ9C0D7 883 aaKnown RBP4.96□□□□□ -1.62
HERC1-203ENST00000558532 C7orf69Q9H7B7 122 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 PARP2Q9UGN5 583 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 HIF3AQ9Y2N7 669 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 PCDHGC5Q9Y5F6 944 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 ACTL7BQ9Y614 415 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 AK5Q9Y6K8 562 aa4.96□□□□□ -1.62
HERC1-203ENST00000558532 ZBTB7CA1YPR0 619 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 GAS2O43903 313 aaKnown RBP4.95□□□□□ -1.62
HERC1-203ENST00000558532 AOC2O75106 756 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 CELA3AP09093 270 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 ERCC3P19447 782 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 NME2P22392 152 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms