RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 KIAA1524Q8TCG1 905 aa17.79■□□□□ 0.44
AP4E1-202ENST00000558439 PUS7LQ9H0K6 701 aaKnown RBP17.79■□□□□ 0.44
AP4E1-202ENST00000558439 KCNJ14Q9UNX9 436 aa17.79■□□□□ 0.44
AP4E1-202ENST00000558439 A0A0U1RQG5 324 aaPredicted RBP17.79■□□□□ 0.44
AP4E1-202ENST00000558439 NLRP5P59047 1200 aa17.79■□□□□ 0.44
AP4E1-202ENST00000558439 ATL3Q6DD88 541 aa17.79■□□□□ 0.44
AP4E1-202ENST00000558439 CACTINQ8WUQ7 758 aaKnown RBP17.79■□□□□ 0.44
AP4E1-202ENST00000558439 DHX58Q96C10 678 aa17.79■□□□□ 0.44
AP4E1-202ENST00000558439 CCDC94Q9BW85 323 aaPredicted RBP17.79■□□□□ 0.44
AP4E1-202ENST00000558439 GNG11P61952 73 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 PDIA6Q15084 440 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 CCDC150Q8NCX0 1101 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 KRT23Q9C075 422 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 CGNQ9P2M7 1197 aaKnown RBP17.78■□□□□ 0.44
AP4E1-202ENST00000558439 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 PTPN21Q16825 1174 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 GOLGA6L1Q8N7Z2 621 aa17.78■□□□□ 0.44
AP4E1-202ENST00000558439 PIP4K2BP78356 416 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 ARID5BQ14865 1188 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 ADALQ6DHV7 355 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 STOX1Q6ZVD7 989 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.77■□□□□ 0.44
AP4E1-202ENST00000558439 XPO4Q9C0E2 1151 aaKnown RBP17.77■□□□□ 0.44
AP4E1-202ENST00000558439 NBPF26B4DH59 902 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 SNAP23O00161 211 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 ZSCAN12O43309 604 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 NBPF14Q5TI25 921 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 NBPF10Q6P3W6 841 aaKnown RBP17.77■□□□□ 0.44
AP4E1-202ENST00000558439 NBPF15Q8N660 670 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 CABP5Q9NP86 173 aa17.77■□□□□ 0.44
AP4E1-202ENST00000558439 H7C1W4 665 aa17.77■□□□□ 0.43
AP4E1-202ENST00000558439 PHKA1P46020 1223 aa17.77■□□□□ 0.43
AP4E1-202ENST00000558439 ATP2B2Q01814 1243 aa17.77■□□□□ 0.43
AP4E1-202ENST00000558439 UTP14AQ9BVJ6 771 aaKnown RBP17.77■□□□□ 0.43
AP4E1-202ENST00000558439 KIAA1468Q9P260 1216 aa17.77■□□□□ 0.43
AP4E1-202ENST00000558439 A0A0G2JLW4 131 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 ARHGAP29Q52LW3 1261 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 FBXO18Q8NFZ0 1043 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 USP42Q9H9J4 1324 aaKnown RBP17.76■□□□□ 0.43
AP4E1-202ENST00000558439 NPHP4O75161 1426 aaPredicted RBP17.76■□□□□ 0.43
AP4E1-202ENST00000558439 REREQ9P2R6 1566 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 USP5P45974 858 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
AP4E1-202ENST00000558439 CDC5LQ99459 802 aaKnown RBP17.76■□□□□ 0.43
AP4E1-202ENST00000558439 CNNM2Q9H8M5 875 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 RCOR1Q9UKL0 485 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 PFKFB1P16118 471 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 NAP1L1P55209 391 aaKnown RBP17.76■□□□□ 0.43
AP4E1-202ENST00000558439 DIS3L2Q8IYB7 885 aaKnown RBP17.76■□□□□ 0.43
AP4E1-202ENST00000558439 ESR2Q92731 530 aa17.76■□□□□ 0.43
AP4E1-202ENST00000558439 TSPY2A6NKD2 308 aa17.75■□□□□ 0.43
AP4E1-202ENST00000558439 GPS2Q13227 327 aa17.75■□□□□ 0.43
AP4E1-202ENST00000558439 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
AP4E1-202ENST00000558439 FANCCQ00597 558 aa17.75■□□□□ 0.43
AP4E1-202ENST00000558439 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
AP4E1-202ENST00000558439 TMCO3Q6UWJ1 677 aa17.75■□□□□ 0.43
AP4E1-202ENST00000558439 TMX4Q9H1E5 349 aaPredicted RBP17.75■□□□□ 0.43
AP4E1-202ENST00000558439 DIP2AQ14689 1571 aa17.75■□□□□ 0.43
AP4E1-202ENST00000558439 PDE8AO60658 829 aa17.75■□□□□ 0.43
AP4E1-202ENST00000558439 PNOCQ13519 176 aa17.75■□□□□ 0.43
AP4E1-202ENST00000558439 MAGEC2Q9UBF1 373 aaPredicted RBP17.75■□□□□ 0.43
AP4E1-202ENST00000558439 ITSN1Q15811 1721 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 CARMIL3Q8ND23 1372 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 POLR3GO15318 223 aaPredicted RBP17.74■□□□□ 0.43
AP4E1-202ENST00000558439 DPCR1Q3MIW9 517 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
AP4E1-202ENST00000558439 KRI1Q8N9T8 703 aaKnown RBP17.74■□□□□ 0.43
AP4E1-202ENST00000558439 TDRD7Q8NHU6 1098 aaKnown RBP17.74■□□□□ 0.43
AP4E1-202ENST00000558439 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 PDE6AP16499 860 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 CASQ1P31415 396 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 MYL5Q02045 173 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 COL9A3Q14050 684 aaPredicted RBP17.74■□□□□ 0.43
AP4E1-202ENST00000558439 PUM3Q15397 648 aaKnown RBP17.74■□□□□ 0.43
AP4E1-202ENST00000558439 CCDC24Q8N4L8 307 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 ZBTB38Q8NAP3 1195 aaPredicted RBP17.74■□□□□ 0.43
AP4E1-202ENST00000558439 POLR2DO15514 142 aaKnown RBP17.74■□□□□ 0.43
AP4E1-202ENST00000558439 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
AP4E1-202ENST00000558439 SLU7O95391 586 aaKnown RBP17.73■□□□□ 0.43
AP4E1-202ENST00000558439 LRRC8AQ8IWT6 810 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 ANKIB1Q9P2G1 1089 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 SH3TC1Q8TE82 1336 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 INCENPQ9NQS7 918 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 CTSWP56202 376 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 SKIDA1Q1XH10 827 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 ANKRD18AQ8IVF6 992 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 SPATA5Q8NB90 893 aa17.73■□□□□ 0.43
AP4E1-202ENST00000558439 YEATS4O95619 227 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 PCCAP05165 728 aaPredicted RBP17.72■□□□□ 0.43
AP4E1-202ENST00000558439 MAGEB6P1A0A0J9YX57 407 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 TRMT44Q8IYL2 757 aaKnown RBP17.72■□□□□ 0.43
AP4E1-202ENST00000558439 CAGE1Q8TC20 777 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms