RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 SLC5A1P13866 664 aa19.42■□□□□ 0.7
TPM1-211ENST00000558314 TBC1D22AQ8WUA7 517 aa19.42■□□□□ 0.7
TPM1-211ENST00000558314 TMEM39BQ9GZU3 492 aa19.42■□□□□ 0.7
TPM1-211ENST00000558314 R3HDMLQ9H3Y0 253 aa19.42■□□□□ 0.7
TPM1-211ENST00000558314 ELP3Q9H9T3 547 aa19.42■□□□□ 0.7
TPM1-211ENST00000558314 MANSC4A6NHS7 340 aaPredicted RBP19.41■□□□□ 0.7
TPM1-211ENST00000558314 TNNI2P48788 182 aa19.41■□□□□ 0.7
TPM1-211ENST00000558314 MAP3K11Q16584 847 aa19.41■□□□□ 0.7
TPM1-211ENST00000558314 CDAN1Q8IWY9 1227 aa19.41■□□□□ 0.7
TPM1-211ENST00000558314 TEKT1Q969V4 418 aa19.41■□□□□ 0.7
TPM1-211ENST00000558314 ECM29Q5VYK3 1845 aa19.41■□□□□ 0.7
TPM1-211ENST00000558314 RFX5P48382 616 aaPredicted RBP19.4■□□□□ 0.7
TPM1-211ENST00000558314 ANKRD13AQ8IZ07 590 aa19.4■□□□□ 0.7
TPM1-211ENST00000558314 API5Q9BZZ5 524 aaKnown RBP19.4■□□□□ 0.7
TPM1-211ENST00000558314 TMOD2Q9NZR1 351 aa19.4■□□□□ 0.7
TPM1-211ENST00000558314 LRRFIP2Q9Y608 721 aaKnown RBP19.4■□□□□ 0.7
TPM1-211ENST00000558314 FKTNO75072 461 aa19.39■□□□□ 0.69
TPM1-211ENST00000558314 IFNL1Q8IU54 200 aa19.39■□□□□ 0.69
TPM1-211ENST00000558314 ALDH1A1P00352 501 aa19.38■□□□□ 0.69
TPM1-211ENST00000558314 ZBTB48P10074 688 aaPredicted RBP19.38■□□□□ 0.69
TPM1-211ENST00000558314 FGFR2P21802 821 aa19.38■□□□□ 0.69
TPM1-211ENST00000558314 TRMT2AQ8IZ69 625 aaKnown RBP19.38■□□□□ 0.69
TPM1-211ENST00000558314 LPIN2Q92539 896 aa19.38■□□□□ 0.69
TPM1-211ENST00000558314 CEP126Q9P2H0 1117 aa19.38■□□□□ 0.69
TPM1-211ENST00000558314 HPS5Q9UPZ3 1129 aa19.38■□□□□ 0.69
TPM1-211ENST00000558314 PA2G4Q9UQ80 394 aaKnown RBP19.38■□□□□ 0.69
TPM1-211ENST00000558314 CCER2I3L3R5 266 aa19.37■□□□□ 0.69
TPM1-211ENST00000558314 IGF2BP3O00425 579 aaKnown RBP eCLIP19.37■□□□□ 0.69
TPM1-211ENST00000558314 GJA5P36382 358 aa19.37■□□□□ 0.69
TPM1-211ENST00000558314 RGS19P49795 217 aa19.37■□□□□ 0.69
TPM1-211ENST00000558314 INHBEP58166 350 aa19.37■□□□□ 0.69
TPM1-211ENST00000558314 ATP2B3Q16720 1220 aa19.37■□□□□ 0.69
TPM1-211ENST00000558314 ATG9AQ7Z3C6 839 aa19.37■□□□□ 0.69
TPM1-211ENST00000558314 OPTNQ96CV9 577 aa19.37■□□□□ 0.69
TPM1-211ENST00000558314 MAST3O60307 1309 aa19.36■□□□□ 0.69
TPM1-211ENST00000558314 CT47B1P0C2W7 299 aaPredicted RBP19.36■□□□□ 0.69
TPM1-211ENST00000558314 CNKSR2Q8WXI2 1034 aa19.36■□□□□ 0.69
TPM1-211ENST00000558314 TEPSINQ96N21 525 aa19.36■□□□□ 0.69
TPM1-211ENST00000558314 MEIS3Q99687 375 aa19.36■□□□□ 0.69
TPM1-211ENST00000558314 CSADQ9Y600 493 aa19.36■□□□□ 0.69
TPM1-211ENST00000558314 ARAP2Q8WZ64 1704 aa19.36■□□□□ 0.69
TPM1-211ENST00000558314 RARSP54136 660 aaKnown RBP19.35■□□□□ 0.69
TPM1-211ENST00000558314 HDLBPQ00341 1268 aaKnown RBP19.35■□□□□ 0.69
TPM1-211ENST00000558314 PKN2Q16513 984 aaKnown RBP19.35■□□□□ 0.69
TPM1-211ENST00000558314 OTUD7BQ6GQQ9 843 aa19.35■□□□□ 0.69
TPM1-211ENST00000558314 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
TPM1-211ENST00000558314 MAP3K9P80192 1104 aa19.34■□□□□ 0.69
TPM1-211ENST00000558314 WDR66Q8TBY9 1149 aa19.34■□□□□ 0.69
TPM1-211ENST00000558314 OTUD5Q96G74 571 aa19.34■□□□□ 0.69
TPM1-211ENST00000558314 GNL3LQ9NVN8 582 aaKnown RBP19.34■□□□□ 0.69
TPM1-211ENST00000558314 HDAC5Q9UQL6 1122 aa19.34■□□□□ 0.69
TPM1-211ENST00000558314 UNCXA6NJT0 531 aa19.33■□□□□ 0.68
TPM1-211ENST00000558314 VGLL4Q14135 290 aa19.33■□□□□ 0.68
TPM1-211ENST00000558314 DIXDC1Q155Q3 683 aa19.33■□□□□ 0.68
TPM1-211ENST00000558314 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.33■□□□□ 0.68
TPM1-211ENST00000558314 ZDHHC15Q96MV8 337 aa19.33■□□□□ 0.68
TPM1-211ENST00000558314 TRIM17Q9Y577 477 aa19.33■□□□□ 0.68
TPM1-211ENST00000558314 KIF16BQ96L93 1317 aa19.32■□□□□ 0.68
TPM1-211ENST00000558314 CIAO1O76071 339 aa19.32■□□□□ 0.68
TPM1-211ENST00000558314 IL15P40933 162 aaPredicted RBP19.32■□□□□ 0.68
TPM1-211ENST00000558314 CRHR2Q13324 411 aa19.32■□□□□ 0.68
TPM1-211ENST00000558314 APOBEC3HQ6NTF7 200 aaKnown RBP19.32■□□□□ 0.68
TPM1-211ENST00000558314 WRNIP1Q96S55 665 aa19.32■□□□□ 0.68
TPM1-211ENST00000558314 CCL15-CCL14A0A0B4J2E2 113 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 PRDX5P30044 214 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 ADORA1P30542 326 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 PHKA1P46020 1223 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 TCP10Q12799 353 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 CCL15Q16663 113 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 FBXO46Q6PJ61 603 aaPredicted RBP19.31■□□□□ 0.68
TPM1-211ENST00000558314 HHIPL2Q6UWX4 724 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 MIGA2Q7L4E1 593 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 CD99L2Q8TCZ2 262 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 CLUAP1Q96AJ1 413 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 PTPN18Q99952 460 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 CFHR5Q9BXR6 569 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 SUGT1Q9Y2Z0 365 aa19.31■□□□□ 0.68
TPM1-211ENST00000558314 SRGAP3O43295 1099 aa19.3■□□□□ 0.68
TPM1-211ENST00000558314 LDHBP07195 334 aaKnown RBP19.3■□□□□ 0.68
TPM1-211ENST00000558314 NOM1Q5C9Z4 860 aaKnown RBP19.3■□□□□ 0.68
TPM1-211ENST00000558314 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.3■□□□□ 0.68
TPM1-211ENST00000558314 ZKSCAN4Q969J2 545 aaPredicted RBP19.3■□□□□ 0.68
TPM1-211ENST00000558314 TNNQ9UQP3 1299 aa19.3■□□□□ 0.68
TPM1-211ENST00000558314 GNAI3P08754 354 aa19.29■□□□□ 0.68
TPM1-211ENST00000558314 FBXO3Q9UK99 471 aa19.29■□□□□ 0.68
TPM1-211ENST00000558314 DAGLAQ9Y4D2 1042 aa19.29■□□□□ 0.68
TPM1-211ENST00000558314 OTOFQ9HC10 1997 aa19.29■□□□□ 0.68
TPM1-211ENST00000558314 IPO8O15397 1037 aaKnown RBP19.28■□□□□ 0.68
TPM1-211ENST00000558314 BCAR3O75815 825 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 GTF2A2P52657 109 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 TIMM10P62072 90 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 TAF1CQ15572 869 aaPredicted RBP19.28■□□□□ 0.68
TPM1-211ENST00000558314 DCAF15Q66K64 600 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 CDC42EP5Q6NZY7 148 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 FAM83AQ86UY5 434 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 BRI3BPQ8WY22 251 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 HOOK2Q96ED9 719 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 ERO1AQ96HE7 468 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 MRIQ9BWK5 157 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 USP40Q9NVE5 1235 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms