RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 SRCIN1Q9C0H9 1055 aa13.5□□□□□ -0.25
SHF-203ENST00000558294 ELP3Q9H9T3 547 aa13.5□□□□□ -0.25
SHF-203ENST00000558294 PTPN22Q9Y2R2 807 aa13.5□□□□□ -0.25
SHF-203ENST00000558294 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
SHF-203ENST00000558294 UTYO14607 1347 aa13.49□□□□□ -0.25
SHF-203ENST00000558294 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
SHF-203ENST00000558294 NBPF7P0C2Y1 421 aaPredicted RBP13.49□□□□□ -0.25
SHF-203ENST00000558294 CRKP46108 304 aa13.49□□□□□ -0.25
SHF-203ENST00000558294 CAP1Q01518 475 aa13.49□□□□□ -0.25
SHF-203ENST00000558294 GRIK5Q16478 980 aa13.49□□□□□ -0.25
SHF-203ENST00000558294 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.49□□□□□ -0.25
SHF-203ENST00000558294 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
SHF-203ENST00000558294 CENPFP49454 3210 aa13.48□□□□□ -0.25
SHF-203ENST00000558294 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
SHF-203ENST00000558294 TCP10L2B9ZVM9 353 aa13.48□□□□□ -0.25
SHF-203ENST00000558294 SP3Q02447 781 aa13.48□□□□□ -0.25
SHF-203ENST00000558294 FBXO33Q7Z6M2 555 aa13.48□□□□□ -0.25
SHF-203ENST00000558294 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
SHF-203ENST00000558294 TMEM39BQ9GZU3 492 aa13.48□□□□□ -0.25
SHF-203ENST00000558294 EFCC1Q9HA90 598 aa13.48□□□□□ -0.25
SHF-203ENST00000558294 MKI67P46013 3256 aaKnown RBP13.47□□□□□ -0.25
SHF-203ENST00000558294 TNNI2P48788 182 aa13.47□□□□□ -0.25
SHF-203ENST00000558294 VGLL4Q14135 290 aa13.47□□□□□ -0.25
SHF-203ENST00000558294 RABL6Q3YEC7 729 aaPredicted RBP13.47□□□□□ -0.25
SHF-203ENST00000558294 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.25
SHF-203ENST00000558294 BRI3BPQ8WY22 251 aa13.47□□□□□ -0.25
SHF-203ENST00000558294 ARMC5Q96C12 935 aa13.47□□□□□ -0.25
SHF-203ENST00000558294 BICC1Q9H694 974 aaKnown RBP13.47□□□□□ -0.25
SHF-203ENST00000558294 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
SHF-203ENST00000558294 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.25
SHF-203ENST00000558294 LRRC24Q50LG9 513 aa13.46□□□□□ -0.25
SHF-203ENST00000558294 VPS37DQ86XT2 251 aa13.46□□□□□ -0.25
SHF-203ENST00000558294 ANKRD44Q8N8A2 993 aa13.46□□□□□ -0.25
SHF-203ENST00000558294 VGLL2Q8N8G2 317 aa13.46□□□□□ -0.25
SHF-203ENST00000558294 TBC1D22AQ8WUA7 517 aa13.46□□□□□ -0.25
SHF-203ENST00000558294 IQSEC3Q9UPP2 1182 aaPredicted RBP13.46□□□□□ -0.25
SHF-203ENST00000558294 CCL15-CCL14A0A0B4J2E2 113 aa13.45□□□□□ -0.26
SHF-203ENST00000558294 PDE8BO95263 885 aa13.45□□□□□ -0.26
SHF-203ENST00000558294 GTF2A2P52657 109 aa13.45□□□□□ -0.26
SHF-203ENST00000558294 CHAF1AQ13111 956 aaPredicted RBP13.45□□□□□ -0.26
SHF-203ENST00000558294 CCL15Q16663 113 aa13.45□□□□□ -0.26
SHF-203ENST00000558294 METTL24Q5JXM2 366 aa13.45□□□□□ -0.26
SHF-203ENST00000558294 BRCA2P51587 3418 aa13.45□□□□□ -0.26
SHF-203ENST00000558294 ZNF521Q96K83 1311 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 SPDYE5A6NIY4 337 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 CACNB3P54284 484 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 TAF1CQ15572 869 aaPredicted RBP13.44□□□□□ -0.26
SHF-203ENST00000558294 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 FAM43AQ8N2R8 423 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 TEKT1Q969V4 418 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 ZFYVE28Q9HCC9 887 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 CSADQ9Y600 493 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 SNCAIPQ9Y6H5 919 aa13.44□□□□□ -0.26
SHF-203ENST00000558294 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
SHF-203ENST00000558294 EN2P19622 333 aaPredicted RBP13.43□□□□□ -0.26
SHF-203ENST00000558294 BCAMP50895 628 aa13.43□□□□□ -0.26
SHF-203ENST00000558294 APOBEC3HQ6NTF7 200 aaKnown RBP13.43□□□□□ -0.26
SHF-203ENST00000558294 FAM83AQ86UY5 434 aa13.43□□□□□ -0.26
SHF-203ENST00000558294 FAM9BQ8IZU0 186 aa13.43□□□□□ -0.26
SHF-203ENST00000558294 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
SHF-203ENST00000558294 KIF16BQ96L93 1317 aa13.42□□□□□ -0.26
SHF-203ENST00000558294 FKBP1CQ5VVH2 108 aa13.42□□□□□ -0.26
SHF-203ENST00000558294 ERO1BQ86YB8 467 aa13.42□□□□□ -0.26
SHF-203ENST00000558294 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
SHF-203ENST00000558294 ZNF333Q96JL9 665 aa13.42□□□□□ -0.26
SHF-203ENST00000558294 SUGT1Q9Y2Z0 365 aa13.42□□□□□ -0.26
SHF-203ENST00000558294 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
SHF-203ENST00000558294 PTPRCP08575 1304 aa13.41□□□□□ -0.26
SHF-203ENST00000558294 ZSWIM8A7E2V4 1837 aa13.41□□□□□ -0.26
SHF-203ENST00000558294 CETPP11597 493 aa13.41□□□□□ -0.26
SHF-203ENST00000558294 FGFR2P21802 821 aa13.41□□□□□ -0.26
SHF-203ENST00000558294 ARHGEF6Q15052 776 aa13.41□□□□□ -0.26
SHF-203ENST00000558294 PUM3Q15397 648 aaKnown RBP13.41□□□□□ -0.26
SHF-203ENST00000558294 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
SHF-203ENST00000558294 WRNIP1Q96S55 665 aa13.41□□□□□ -0.26
SHF-203ENST00000558294 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
SHF-203ENST00000558294 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
SHF-203ENST00000558294 TMOD2Q9NZR1 351 aa13.41□□□□□ -0.26
SHF-203ENST00000558294 RPAP1Q9BWH6 1393 aaPredicted RBP13.41□□□□□ -0.26
SHF-203ENST00000558294 MAST3O60307 1309 aa13.4□□□□□ -0.26
SHF-203ENST00000558294 BTBD19C9JJ37 291 aa13.4□□□□□ -0.26
SHF-203ENST00000558294 TLR2O60603 784 aa13.4□□□□□ -0.26
SHF-203ENST00000558294 PPIL2Q13356 520 aa13.4□□□□□ -0.26
SHF-203ENST00000558294 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.26
SHF-203ENST00000558294 HABP4Q5JVS0 413 aaKnown RBP13.4□□□□□ -0.26
SHF-203ENST00000558294 HHIPL2Q6UWX4 724 aa13.4□□□□□ -0.26
SHF-203ENST00000558294 HOOK2Q96ED9 719 aa13.4□□□□□ -0.26
SHF-203ENST00000558294 MYH13Q9UKX3 1938 aa13.4□□□□□ -0.26
SHF-203ENST00000558294 IRF6O14896 467 aa13.39□□□□□ -0.27
SHF-203ENST00000558294 IFIT1P09914 478 aaKnown RBP13.39□□□□□ -0.27
SHF-203ENST00000558294 RFX5P48382 616 aaPredicted RBP13.39□□□□□ -0.27
SHF-203ENST00000558294 SNAPC2Q13487 334 aa13.39□□□□□ -0.27
SHF-203ENST00000558294 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
SHF-203ENST00000558294 NBPF11Q86T75 865 aa13.39□□□□□ -0.27
SHF-203ENST00000558294 SSH1Q8WYL5 1049 aa13.39□□□□□ -0.27
SHF-203ENST00000558294 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms