RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 BCS1LQ9Y276 419 aa9.13□□□□□ -0.95
TRPM1-206ENST00000558212 RGPD2P0DJD1 1756 aa9.13□□□□□ -0.95
TRPM1-206ENST00000558212 PKD1L3Q7Z443 1732 aa9.13□□□□□ -0.95
TRPM1-206ENST00000558212 TNRC6CQ9HCJ0 1690 aaKnown RBP9.13□□□□□ -0.95
TRPM1-206ENST00000558212 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
TRPM1-206ENST00000558212 PCDH11XQ9BZA7 1347 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 PCDH11YQ9BZA8 1340 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 EML1O00423 815 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 SPINT1O43278 529 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 PPP1R12BO60237 982 aaPredicted RBP9.12□□□□□ -0.95
TRPM1-206ENST00000558212 AVPP01185 164 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 HOXC9P31274 260 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 RELBQ01201 579 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 ZNF211Q13398 564 aaPredicted RBP9.12□□□□□ -0.95
TRPM1-206ENST00000558212 TBCELQ5QJ74 424 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 C9orf131Q5VYM1 1079 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 ARHGAP27Q6ZUM4 889 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 SMC1BQ8NDV3 1235 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 ZDHHC1Q8WTX9 485 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 MYO19Q96H55 970 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 RTL1A6NKG5 1358 aa9.12□□□□□ -0.95
TRPM1-206ENST00000558212 KCPQ6ZWJ8 1503 aa9.11□□□□□ -0.95
TRPM1-206ENST00000558212 MAP3K19Q56UN5 1328 aa9.11□□□□□ -0.95
TRPM1-206ENST00000558212 BRCA1P38398 1863 aaKnown RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 ARFGEF1Q9Y6D6 1849 aa9.11□□□□□ -0.95
TRPM1-206ENST00000558212 H3BRB1 525 aa9.11□□□□□ -0.95
TRPM1-206ENST00000558212 MMP10P09238 476 aa9.11□□□□□ -0.95
TRPM1-206ENST00000558212 HSPA1AP0DMV8 641 aaKnown RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 HSPA1BP0DMV9 641 aaKnown RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 RNF144AP50876 292 aaPredicted RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 FKBP4Q02790 459 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 NOM1Q5C9Z4 860 aaKnown RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 MPRIPQ6WCQ1 1025 aa9.11□□□□□ -0.95
TRPM1-206ENST00000558212 RAPGEF4Q8WZA2 1011 aa9.11□□□□□ -0.95
TRPM1-206ENST00000558212 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 GRIP2Q9C0E4 1043 aa9.11□□□□□ -0.95
TRPM1-206ENST00000558212 TUT1Q9H6E5 874 aaKnown RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 ZNF395Q9H8N7 513 aaPredicted RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 ROCK2O75116 1388 aaKnown RBP9.11□□□□□ -0.95
TRPM1-206ENST00000558212 MAP2P11137 1827 aaKnown RBP9.1□□□□□ -0.95
TRPM1-206ENST00000558212 ITGB4P16144 1822 aa9.1□□□□□ -0.95
TRPM1-206ENST00000558212 A0A0G2JLW4 131 aa9.1□□□□□ -0.95
TRPM1-206ENST00000558212 ABL1P00519 1130 aa9.1□□□□□ -0.95
TRPM1-206ENST00000558212 AMPHP49418 695 aa9.1□□□□□ -0.95
TRPM1-206ENST00000558212 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
TRPM1-206ENST00000558212 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
TRPM1-206ENST00000558212 TERF2IPQ9NYB0 399 aa9.1□□□□□ -0.95
TRPM1-206ENST00000558212 A0A1W2PP64 1363 aa9.1□□□□□ -0.95
TRPM1-206ENST00000558212 SMG6Q86US8 1419 aaKnown RBP9.09□□□□□ -0.95
TRPM1-206ENST00000558212 MEN1O00255 615 aa9.09□□□□□ -0.95
TRPM1-206ENST00000558212 TATP17735 454 aaPredicted RBP9.09□□□□□ -0.95
TRPM1-206ENST00000558212 NBPF6Q5VWK0 638 aa9.09□□□□□ -0.95
TRPM1-206ENST00000558212 C16orf46Q6P387 395 aa9.09□□□□□ -0.95
TRPM1-206ENST00000558212 SMIM5Q71RC9 77 aa9.09□□□□□ -0.95
TRPM1-206ENST00000558212 TMC1Q8TDI8 760 aa9.09□□□□□ -0.95
TRPM1-206ENST00000558212 NBPF4Q96M43 638 aa9.09□□□□□ -0.95
TRPM1-206ENST00000558212 NLRP3Q96P20 1036 aa9.09□□□□□ -0.95
TRPM1-206ENST00000558212 ZSCAN10Q96SZ4 725 aaPredicted RBP9.09□□□□□ -0.95
TRPM1-206ENST00000558212 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
TRPM1-206ENST00000558212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRPM1-206ENST00000558212 LOC102724428A0A0B4J2F2 783 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 TNFRSF10BO14763 440 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 CAPN5O15484 640 aaPredicted RBP9.08□□□□□ -0.96
TRPM1-206ENST00000558212 DPEP1P16444 411 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 NOS2P35228 1153 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 SIK1P57059 783 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 MTMR3Q13615 1198 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 NAA30Q147X3 362 aaPredicted RBP9.08□□□□□ -0.96
TRPM1-206ENST00000558212 COX20Q5RI15 118 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 SH3PXD2AQ5TCZ1 1133 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 NLGN1Q8N2Q7 840 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 LINC00116Q8NCU8 138 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 RHBDD1Q8TEB9 315 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 COG3Q96JB2 828 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 RRAGCQ9HB90 399 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 CCDC87Q9NVE4 849 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 PDZRN3Q9UPQ7 1066 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 C4AP0C0L4 1744 aa9.08□□□□□ -0.96
TRPM1-206ENST00000558212 SERTM1A2A2V5 107 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 CYP27B1O15528 508 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 ERCC3P19447 782 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 TMF1P82094 1093 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 USHBP1Q8N6Y0 703 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 PIGBQ92521 554 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 L3MBTL2Q969R5 705 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 SLC12A5Q9H2X9 1139 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 RNF181Q9P0P0 153 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 LRFN2Q9ULH4 789 aa9.07□□□□□ -0.96
TRPM1-206ENST00000558212 SPATA31C2B4DYI2 1134 aa9.06□□□□□ -0.96
TRPM1-206ENST00000558212 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
TRPM1-206ENST00000558212 VTI1AQ96AJ9 217 aa9.06□□□□□ -0.96
TRPM1-206ENST00000558212 DCAF5Q96JK2 942 aa9.06□□□□□ -0.96
TRPM1-206ENST00000558212 PUS7Q96PZ0 661 aaKnown RBP9.06□□□□□ -0.96
TRPM1-206ENST00000558212 INSM2Q96T92 566 aaPredicted RBP9.06□□□□□ -0.96
TRPM1-206ENST00000558212 NIFKQ9BYG3 293 aaKnown RBP9.06□□□□□ -0.96
TRPM1-206ENST00000558212 PIM2Q9P1W9 311 aa9.06□□□□□ -0.96
TRPM1-206ENST00000558212 SBF1O95248 1867 aa9.06□□□□□ -0.96
TRPM1-206ENST00000558212 KCNA3P22001 575 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms