RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 BBOX1O75936 387 aa14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 ATP8B2P98198 1209 aa14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 GPR162Q16538 588 aa14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 OLFM4Q6UX06 510 aa14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 SLC51AQ86UW1 340 aa14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 MPHOSPH8Q99549 860 aa14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 COL4A1P02462 1669 aa14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 NEFLP07196 543 aa14.94□□□□□ -0.02
HMGB1P8-201ENST00000558211 CEP85Q6P2H3 762 aa14.94□□□□□ -0.02
HMGB1P8-201ENST00000558211 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
HMGB1P8-201ENST00000558211 PA2G4Q9UQ80 394 aaKnown RBP14.94□□□□□ -0.02
HMGB1P8-201ENST00000558211 RTL9Q8NET4 1388 aa14.94□□□□□ -0.02
HMGB1P8-201ENST00000558211 LDHAL6AQ6ZMR3 332 aa14.93□□□□□ -0.02
HMGB1P8-201ENST00000558211 PUS3Q9BZE2 481 aaKnown RBP14.93□□□□□ -0.02
HMGB1P8-201ENST00000558211 FAM117AQ9C073 453 aa14.93□□□□□ -0.02
HMGB1P8-201ENST00000558211 SIL1Q9H173 461 aa14.93□□□□□ -0.02
HMGB1P8-201ENST00000558211 CNNM1Q9NRU3 951 aa14.93□□□□□ -0.02
HMGB1P8-201ENST00000558211 SRCAPQ6ZRS2 3230 aa14.93□□□□□ -0.02
HMGB1P8-201ENST00000558211 KDM4AO75164 1064 aa14.92□□□□□ -0.02
HMGB1P8-201ENST00000558211 YBX3P16989 372 aaKnown RBP eCLIP14.92□□□□□ -0.02
HMGB1P8-201ENST00000558211 RFX5P48382 616 aaPredicted RBP14.92□□□□□ -0.02
HMGB1P8-201ENST00000558211 FUT2Q10981 343 aa14.92□□□□□ -0.02
HMGB1P8-201ENST00000558211 RPAP2Q8IXW5 612 aaPredicted RBP14.92□□□□□ -0.02
HMGB1P8-201ENST00000558211 PTPN12Q05209 780 aaKnown RBP14.91□□□□□ -0.02
HMGB1P8-201ENST00000558211 MTX1Q13505 466 aa14.91□□□□□ -0.02
HMGB1P8-201ENST00000558211 LRRC24Q50LG9 513 aa14.91□□□□□ -0.02
HMGB1P8-201ENST00000558211 SP8Q8IXZ3 490 aa14.91□□□□□ -0.02
HMGB1P8-201ENST00000558211 BSDC1Q9NW68 430 aaPredicted RBP14.91□□□□□ -0.02
HMGB1P8-201ENST00000558211 ATP6V0A2Q9Y487 856 aa14.91□□□□□ -0.02
HMGB1P8-201ENST00000558211 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
HMGB1P8-201ENST00000558211 ARHGAP27Q6ZUM4 889 aa14.9□□□□□ -0.02
HMGB1P8-201ENST00000558211 SIRT2Q8IXJ6 389 aa14.9□□□□□ -0.02
HMGB1P8-201ENST00000558211 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
HMGB1P8-201ENST00000558211 SSH3Q8TE77 659 aa14.9□□□□□ -0.02
HMGB1P8-201ENST00000558211 C7orf43Q8WVR3 580 aa14.9□□□□□ -0.02
HMGB1P8-201ENST00000558211 SPIRE2Q8WWL2 714 aa14.9□□□□□ -0.02
HMGB1P8-201ENST00000558211 NSFL1CQ9UNZ2 370 aaKnown RBP14.9□□□□□ -0.02
HMGB1P8-201ENST00000558211 ARFGEF1Q9Y6D6 1849 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 HMMRO75330 724 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 SURF6O75683 361 aaKnown RBP14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 USP46P62068 366 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 CCDC93Q567U6 631 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 TJAP1Q5JTD0 557 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 TMC4Q7Z404 712 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 ANKIB1Q9P2G1 1089 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 MINPP1Q9UNW1 487 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 PCDHB3Q9Y5E6 796 aa14.89□□□□□ -0.03
HMGB1P8-201ENST00000558211 EYA2O00167 538 aa14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 TAF5LO75529 589 aa14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 GPSM2P81274 684 aa14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 CHRNDQ07001 517 aa14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 G3BP1Q13283 466 aaKnown RBP eCLIP14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 OS9Q13438 667 aaPredicted RBP14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 MPNDQ8N594 471 aa14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 DDRGK1Q96HY6 314 aa14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 BCL11AQ9H165 835 aa14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 COPRSQ9NQ92 184 aa14.88□□□□□ -0.03
HMGB1P8-201ENST00000558211 APBB1O00213 710 aa14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 ITGBL1O95965 494 aaPredicted RBP14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 AAMPQ13685 434 aa14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 METTL24Q5JXM2 366 aa14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 SOGA3Q5TF21 947 aa14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 CC2D2BQ6DHV5 1058 aa14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 EXOC6BQ9Y2D4 811 aa14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 RIPOR2Q9Y4F9 1068 aa14.87□□□□□ -0.03
HMGB1P8-201ENST00000558211 C6orf229H3BNL8 230 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 HOXA2O43364 376 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 RASSF7Q02833 373 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 MORN1Q5T089 497 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 ATG9AQ7Z3C6 839 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 RTKN2Q8IZC4 609 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 MTRQ99707 1265 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 TBC1D2Q9BYX2 928 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 ANKRD2Q9GZV1 360 aa14.86□□□□□ -0.03
HMGB1P8-201ENST00000558211 WTIPA6NIX2 430 aaPredicted RBP14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 SNAP23O00161 211 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 GRIN3BO60391 1043 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 UFL1O94874 794 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 IL15P40933 162 aaPredicted RBP14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 KCNJ4P48050 445 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 PUS10Q3MIT2 529 aaKnown RBP14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 BLOC1S3Q6QNY0 202 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 GPR101Q96P66 508 aaPredicted RBP14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 CEP126Q9P2H0 1117 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 GGA1Q9UJY5 639 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 XDHP47989 1333 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 MROH5Q6ZUA9 1318 aa14.85□□□□□ -0.03
HMGB1P8-201ENST00000558211 CIAO1O76071 339 aa14.84□□□□□ -0.03
HMGB1P8-201ENST00000558211 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
HMGB1P8-201ENST00000558211 TAOK3Q9H2K8 898 aa14.84□□□□□ -0.03
HMGB1P8-201ENST00000558211 POLLQ9UGP5 575 aa14.84□□□□□ -0.03
HMGB1P8-201ENST00000558211 FER1L6Q2WGJ9 1857 aa14.84□□□□□ -0.03
HMGB1P8-201ENST00000558211 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
HMGB1P8-201ENST00000558211 LRRC37AA6NMS7 1700 aa14.83□□□□□ -0.03
HMGB1P8-201ENST00000558211 NFKBIEO00221 500 aa14.83□□□□□ -0.04
HMGB1P8-201ENST00000558211 ATP2B4P23634 1241 aa14.83□□□□□ -0.04
HMGB1P8-201ENST00000558211 TFCP2Q12800 502 aa14.83□□□□□ -0.04
HMGB1P8-201ENST00000558211 DIXDC1Q155Q3 683 aa14.83□□□□□ -0.04
HMGB1P8-201ENST00000558211 GRIPAP1Q4V328 841 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms