RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 PPLO60437 1756 aa9.18□□□□□ -0.94
CLPX-202ENST00000558103 SASH3O75995 380 aa9.18□□□□□ -0.94
CLPX-202ENST00000558103 FURINP09958 794 aa9.18□□□□□ -0.94
CLPX-202ENST00000558103 TARSP26639 723 aaKnown RBP9.18□□□□□ -0.94
CLPX-202ENST00000558103 SPATA31A6Q5VVP1 1343 aa9.18□□□□□ -0.94
CLPX-202ENST00000558103 CHSY3Q70JA7 882 aa9.18□□□□□ -0.94
CLPX-202ENST00000558103 KCNMB2Q9Y691 235 aa9.18□□□□□ -0.94
CLPX-202ENST00000558103 MST1RQ04912 1400 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 XYLBO75191 536 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 MAP3K6O95382 1288 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 HOXB4P17483 251 aaPredicted RBP9.17□□□□□ -0.94
CLPX-202ENST00000558103 NFKB1P19838 968 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 BAG6P46379 1132 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 SNRPNP63162 240 aaKnown RBP9.17□□□□□ -0.94
CLPX-202ENST00000558103 KRTAP4-12Q9BQ66 201 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 C19orf44Q9H6X5 657 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 RRAGCQ9HB90 399 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 ZFATQ9P243 1243 aa9.17□□□□□ -0.94
CLPX-202ENST00000558103 NPR3P17342 541 aa9.16□□□□□ -0.94
CLPX-202ENST00000558103 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
CLPX-202ENST00000558103 KRT25Q7Z3Z0 450 aa9.16□□□□□ -0.94
CLPX-202ENST00000558103 GPR152Q8TDT2 470 aa9.16□□□□□ -0.94
CLPX-202ENST00000558103 SETD5Q9C0A6 1442 aa9.15□□□□□ -0.94
CLPX-202ENST00000558103 ADGRL3Q9HAR2 1447 aa9.15□□□□□ -0.94
CLPX-202ENST00000558103 ADH7P40394 386 aa9.15□□□□□ -0.94
CLPX-202ENST00000558103 FKBP4Q02790 459 aaKnown RBP eCLIP9.15□□□□□ -0.94
CLPX-202ENST00000558103 SF3B2Q13435 895 aaKnown RBP9.15□□□□□ -0.94
CLPX-202ENST00000558103 MTMR3Q13615 1198 aa9.15□□□□□ -0.94
CLPX-202ENST00000558103 LINC00114Q6XXX2 140 aa9.15□□□□□ -0.94
CLPX-202ENST00000558103 PODNQ7Z5L7 613 aa9.15□□□□□ -0.94
CLPX-202ENST00000558103 IGFLR1Q9H665 355 aa9.15□□□□□ -0.94
CLPX-202ENST00000558103 AMOTL2Q9Y2J4 779 aa9.15□□□□□ -0.94
CLPX-202ENST00000558103 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 RRBP1Q9P2E9 1410 aaKnown RBP9.14□□□□□ -0.95
CLPX-202ENST00000558103 IFT172Q9UG01 1749 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 METP08581 1390 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 ABL1P00519 1130 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 ATF3P18847 181 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 BRINP3Q76B58 766 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 ATCAYQ86WG3 371 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 UBE2OQ9C0C9 1292 aaKnown RBP9.14□□□□□ -0.95
CLPX-202ENST00000558103 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
CLPX-202ENST00000558103 MKL2Q9ULH7 1088 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 FNDC3AQ9Y2H6 1198 aaKnown RBP9.14□□□□□ -0.95
CLPX-202ENST00000558103 NAIPQ13075 1403 aa9.14□□□□□ -0.95
CLPX-202ENST00000558103 FAM13AO94988 1023 aa9.13□□□□□ -0.95
CLPX-202ENST00000558103 RARAP10276 462 aa9.13□□□□□ -0.95
CLPX-202ENST00000558103 MPSTP25325 297 aa9.13□□□□□ -0.95
CLPX-202ENST00000558103 EIF1AXP47813 144 aaKnown RBP9.13□□□□□ -0.95
CLPX-202ENST00000558103 ALKBH2Q6NS38 261 aa9.13□□□□□ -0.95
CLPX-202ENST00000558103 KRTAP9-9Q9BYP9 154 aa9.13□□□□□ -0.95
CLPX-202ENST00000558103 KRTAP9-4Q9BYQ2 154 aa9.13□□□□□ -0.95
CLPX-202ENST00000558103 STARD13Q9Y3M8 1113 aa9.13□□□□□ -0.95
CLPX-202ENST00000558103 MARF1Q9Y4F3 1742 aaKnown RBP9.13□□□□□ -0.95
CLPX-202ENST00000558103 CDK12Q9NYV4 1490 aaPredicted RBP9.13□□□□□ -0.95
CLPX-202ENST00000558103 PTCH1Q13635 1447 aa9.13□□□□□ -0.95
CLPX-202ENST00000558103 COL22A1Q8NFW1 1626 aaPredicted RBP9.13□□□□□ -0.95
CLPX-202ENST00000558103 EP400Q96L91 3159 aa9.12□□□□□ -0.95
CLPX-202ENST00000558103 ITGAEP38570 1179 aa9.12□□□□□ -0.95
CLPX-202ENST00000558103 DGKGP49619 791 aa9.12□□□□□ -0.95
CLPX-202ENST00000558103 TBC1D8BQ0IIM8 1120 aa9.12□□□□□ -0.95
CLPX-202ENST00000558103 TRIP4Q15650 581 aaPredicted RBP9.12□□□□□ -0.95
CLPX-202ENST00000558103 PCSK7Q16549 785 aa9.12□□□□□ -0.95
CLPX-202ENST00000558103 DHX32Q7L7V1 743 aaKnown RBP9.12□□□□□ -0.95
CLPX-202ENST00000558103 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
CLPX-202ENST00000558103 ANO2Q9NQ90 1003 aa9.12□□□□□ -0.95
CLPX-202ENST00000558103 TLR7Q9NYK1 1049 aaKnown RBP9.12□□□□□ -0.95
CLPX-202ENST00000558103 EGFL7Q9UHF1 273 aa9.12□□□□□ -0.95
CLPX-202ENST00000558103 ZBTB42B2RXF5 422 aa9.11□□□□□ -0.95
CLPX-202ENST00000558103 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
CLPX-202ENST00000558103 TRPM4Q8TD43 1214 aa9.11□□□□□ -0.95
CLPX-202ENST00000558103 SLC6A14Q9UN76 642 aa9.11□□□□□ -0.95
CLPX-202ENST00000558103 KNDC1Q76NI1 1749 aa9.11□□□□□ -0.95
CLPX-202ENST00000558103 ICMTO60725 284 aa9.1□□□□□ -0.95
CLPX-202ENST00000558103 MMP20O60882 483 aa9.1□□□□□ -0.95
CLPX-202ENST00000558103 MZF1P28698 734 aaPredicted RBP9.1□□□□□ -0.95
CLPX-202ENST00000558103 SERPINB4P48594 390 aa9.1□□□□□ -0.95
CLPX-202ENST00000558103 ZNF211Q13398 564 aaPredicted RBP9.1□□□□□ -0.95
CLPX-202ENST00000558103 MEX3CQ5U5Q3 659 aaKnown RBP9.1□□□□□ -0.95
CLPX-202ENST00000558103 C20orf204Q6ZNR8 217 aa9.1□□□□□ -0.95
CLPX-202ENST00000558103 MICALL1Q8N3F8 863 aa9.1□□□□□ -0.95
CLPX-202ENST00000558103 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
CLPX-202ENST00000558103 CDC42BPGQ6DT37 1551 aa9.1□□□□□ -0.95
CLPX-202ENST00000558103 PNPLA6Q8IY17 1366 aa9.1□□□□□ -0.95
CLPX-202ENST00000558103 C1orf167Q5SNV9 1468 aa9.09□□□□□ -0.95
CLPX-202ENST00000558103 HFM1A2PYH4 1435 aa9.09□□□□□ -0.95
CLPX-202ENST00000558103 BRD1O95696 1058 aa9.09□□□□□ -0.95
CLPX-202ENST00000558103 RPLP1P05386 114 aaKnown RBP9.09□□□□□ -0.95
CLPX-202ENST00000558103 PCSK2P16519 638 aa9.09□□□□□ -0.95
CLPX-202ENST00000558103 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
CLPX-202ENST00000558103 AAMPQ13685 434 aa9.09□□□□□ -0.95
CLPX-202ENST00000558103 ZNF326Q5BKZ1 582 aaKnown RBP9.09□□□□□ -0.95
CLPX-202ENST00000558103 EDEM1Q92611 657 aa9.09□□□□□ -0.95
CLPX-202ENST00000558103 RGS12O14924 1447 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 M0R082 166 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 PIK3R2O00459 728 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 GNB5O14775 395 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 PDGFAP04085 211 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 PSAPP07602 524 aa9.08□□□□□ -0.96
CLPX-202ENST00000558103 NRLP54845 237 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms