RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SUGT1Q9Y2Z0 365 aa17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 KIF16BQ96L93 1317 aa17.01■□□□□ 0.31
SNRPA1-204ENST00000558020 ECM29Q5VYK3 1845 aa17.01■□□□□ 0.31
SNRPA1-204ENST00000558020 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-204ENST00000558020 TRMT2AQ8IZ69 625 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-204ENST00000558020 TEKT1Q969V4 418 aa17.01■□□□□ 0.31
SNRPA1-204ENST00000558020 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-204ENST00000558020 IQSEC3Q9UPP2 1182 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-204ENST00000558020 MAST3O60307 1309 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 CCER2I3L3R5 266 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 EYA2O00167 538 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 FKTNO75072 461 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 USP2O75604 605 aaPredicted RBP17■□□□□ 0.31
SNRPA1-204ENST00000558020 SLC5A1P13866 664 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 BCAMP50895 628 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 VGLL2Q8N8G2 317 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 KLHDC4Q8TBB5 520 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 HOOK2Q96ED9 719 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 WNK4Q96J92 1243 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 TMOD2Q9NZR1 351 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 FBXO3Q9UK99 471 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 FZD1Q9UP38 647 aa17■□□□□ 0.31
SNRPA1-204ENST00000558020 IFNL1Q8IU54 200 aa16.99■□□□□ 0.31
SNRPA1-204ENST00000558020 LPIN2Q92539 896 aa16.99■□□□□ 0.31
SNRPA1-204ENST00000558020 CLMNQ96JQ2 1002 aa16.99■□□□□ 0.31
SNRPA1-204ENST00000558020 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-204ENST00000558020 TCP10L2B9ZVM9 353 aa16.98■□□□□ 0.31
SNRPA1-204ENST00000558020 WDR66Q8TBY9 1149 aa16.98■□□□□ 0.31
SNRPA1-204ENST00000558020 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
SNRPA1-204ENST00000558020 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-204ENST00000558020 CEP126Q9P2H0 1117 aa16.98■□□□□ 0.31
SNRPA1-204ENST00000558020 FGFR2P21802 821 aa16.97■□□□□ 0.31
SNRPA1-204ENST00000558020 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
SNRPA1-204ENST00000558020 CSADQ9Y600 493 aa16.97■□□□□ 0.31
SNRPA1-204ENST00000558020 AOX1Q06278 1338 aa16.96■□□□□ 0.31
SNRPA1-204ENST00000558020 CIAO1O76071 339 aa16.96■□□□□ 0.31
SNRPA1-204ENST00000558020 MAP3K9P80192 1104 aa16.96■□□□□ 0.31
SNRPA1-204ENST00000558020 FBXO46Q6PJ61 603 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-204ENST00000558020 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
SNRPA1-204ENST00000558020 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.31
SNRPA1-204ENST00000558020 SSC5DA1L4H1 1573 aa16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 RFX5P48382 616 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 FAM83AQ86UY5 434 aa16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 ARHGAP45Q92619 1136 aa16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 OPTNQ96CV9 577 aa16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 TEPSINQ96N21 525 aa16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 TMEM39BQ9GZU3 492 aa16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 ELP3Q9H9T3 547 aa16.95■□□□□ 0.3
SNRPA1-204ENST00000558020 IPO8O15397 1037 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-204ENST00000558020 IL15P40933 162 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-204ENST00000558020 GRIK5Q16478 980 aa16.94■□□□□ 0.3
SNRPA1-204ENST00000558020 ATP2B3Q16720 1220 aa16.94■□□□□ 0.3
SNRPA1-204ENST00000558020 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
SNRPA1-204ENST00000558020 SIL1Q9H173 461 aa16.94■□□□□ 0.3
SNRPA1-204ENST00000558020 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-204ENST00000558020 GNAI3P08754 354 aa16.93■□□□□ 0.3
SNRPA1-204ENST00000558020 GTF2A2P52657 109 aa16.93■□□□□ 0.3
SNRPA1-204ENST00000558020 SOX10P56693 466 aa16.93■□□□□ 0.3
SNRPA1-204ENST00000558020 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
SNRPA1-204ENST00000558020 R3HDMLQ9H3Y0 253 aa16.93■□□□□ 0.3
SNRPA1-204ENST00000558020 IGF2BP3O00425 579 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 SEMA3EO15041 775 aa16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 RARSP54136 660 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 ARHGEF6Q15052 776 aa16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 DCAF15Q66K64 600 aa16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 APOBEC3HQ6NTF7 200 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 DENND2AQ9ULE3 1009 aa16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 ARAP2Q8WZ64 1704 aa16.92■□□□□ 0.3
SNRPA1-204ENST00000558020 LDHBP07195 334 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-204ENST00000558020 CACNB3P54284 484 aa16.91■□□□□ 0.3
SNRPA1-204ENST00000558020 VGLL4Q14135 290 aa16.91■□□□□ 0.3
SNRPA1-204ENST00000558020 ZGPATQ8N5A5 531 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-204ENST00000558020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNRPA1-204ENST00000558020 COPRSQ9NQ92 184 aa16.91■□□□□ 0.3
SNRPA1-204ENST00000558020 GJA5P36382 358 aa16.9■□□□□ 0.3
SNRPA1-204ENST00000558020 CRHR2Q13324 411 aa16.9■□□□□ 0.3
SNRPA1-204ENST00000558020 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-204ENST00000558020 AKAP2Q9Y2D5 859 aa16.9■□□□□ 0.3
SNRPA1-204ENST00000558020 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
SNRPA1-204ENST00000558020 SP3Q02447 781 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 ERO1BQ86YB8 467 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 OTUD5Q96G74 571 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 PTPN18Q99952 460 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 ZFYVE28Q9HCC9 887 aa16.89■□□□□ 0.29
SNRPA1-204ENST00000558020 CCL15-CCL14A0A0B4J2E2 113 aa16.88■□□□□ 0.29
SNRPA1-204ENST00000558020 CETPP11597 493 aa16.88■□□□□ 0.29
SNRPA1-204ENST00000558020 CCL15Q16663 113 aa16.88■□□□□ 0.29
SNRPA1-204ENST00000558020 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
SNRPA1-204ENST00000558020 MEIS3Q99687 375 aa16.88■□□□□ 0.29
SNRPA1-204ENST00000558020 ZNF341Q9BYN7 854 aa16.88■□□□□ 0.29
SNRPA1-204ENST00000558020 SALL1Q9NSC2 1324 aa16.88■□□□□ 0.29
SNRPA1-204ENST00000558020 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
SNRPA1-204ENST00000558020 ZBTB22O15209 634 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms