RNA–Protein interactions for RNA: ENST00000557813.2

CGNL1-202, Transcript of cingulin like 1, humanhuman

TSL 1 (best)

Gene CGNL1, Length 915 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1-202ENST00000557813 SHROOM4Q9ULL8 1493 aa8.21□□□□□ -1.09
CGNL1-202ENST00000557813 FAM177BA6PVY3 158 aa8.21□□□□□ -1.1
CGNL1-202ENST00000557813 RANGAP1P46060 587 aaPredicted RBP8.21□□□□□ -1.1
CGNL1-202ENST00000557813 PIP4K2BP78356 416 aa8.21□□□□□ -1.1
CGNL1-202ENST00000557813 GSTM4Q03013 218 aa8.21□□□□□ -1.1
CGNL1-202ENST00000557813 PLVAPQ9BX97 442 aa8.21□□□□□ -1.1
CGNL1-202ENST00000557813 SOX17Q9H6I2 414 aaPredicted RBP8.21□□□□□ -1.1
CGNL1-202ENST00000557813 OSGEPQ9NPF4 335 aa8.21□□□□□ -1.1
CGNL1-202ENST00000557813 KBTBD4Q9NVX7 518 aa8.21□□□□□ -1.1
CGNL1-202ENST00000557813 KCNK4Q9NYG8 393 aa8.21□□□□□ -1.1
CGNL1-202ENST00000557813 TLR6Q9Y2C9 796 aa8.21□□□□□ -1.1
CGNL1-202ENST00000557813 LMTK3Q96Q04 1460 aa8.2□□□□□ -1.1
CGNL1-202ENST00000557813 A0A0A0MRY4 1105 aa8.2□□□□□ -1.1
CGNL1-202ENST00000557813 DDX3YO15523 660 aaKnown RBP8.2□□□□□ -1.1
CGNL1-202ENST00000557813 ECEL1O95672 775 aa8.2□□□□□ -1.1
CGNL1-202ENST00000557813 ERCC5P28715 1186 aaPredicted RBP8.2□□□□□ -1.1
CGNL1-202ENST00000557813 C19orf57Q0VDD7 668 aa8.2□□□□□ -1.1
CGNL1-202ENST00000557813 PCNX4Q63HM2 1172 aa8.2□□□□□ -1.1
CGNL1-202ENST00000557813 PHC3Q8NDX5 983 aa8.2□□□□□ -1.1
CGNL1-202ENST00000557813 WNT8BQ93098 351 aa8.2□□□□□ -1.1
CGNL1-202ENST00000557813 DDX41Q9UJV9 622 aaKnown RBP8.2□□□□□ -1.1
CGNL1-202ENST00000557813 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 ADAM11O75078 769 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 CTSBP07858 339 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 NME2P22392 152 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 LIG3P49916 1009 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 PPP2R3AQ06190 1150 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 FAM117BQ6P1L5 589 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 MPRIPQ6WCQ1 1025 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 PDZD3Q86UT5 571 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 USP48Q86UV5 1035 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 SULF2Q8IWU5 870 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 GRIN3AQ8TCU5 1115 aa8.19□□□□□ -1.1
CGNL1-202ENST00000557813 MINDY4BA8MYZ0 360 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 GNB5O14775 395 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 TFE3P19532 575 aaPredicted RBP8.18□□□□□ -1.1
CGNL1-202ENST00000557813 ARNTP27540 789 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 FOXD4L6Q3SYB3 417 aaPredicted RBP8.18□□□□□ -1.1
CGNL1-202ENST00000557813 TTBK2Q6IQ55 1244 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 FOXD4L3Q6VB84 417 aaPredicted RBP8.18□□□□□ -1.1
CGNL1-202ENST00000557813 AGMOQ6ZNB7 445 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 FBXO11Q86XK2 927 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 FMR1NBQ8N0W7 255 aaPredicted RBP8.18□□□□□ -1.1
CGNL1-202ENST00000557813 KLHL23Q8NBE8 558 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 TMEM74Q96NL1 305 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 MKL2Q9ULH7 1088 aa8.18□□□□□ -1.1
CGNL1-202ENST00000557813 DLL1O00548 723 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 GBP2P32456 591 aaPredicted RBP8.17□□□□□ -1.1
CGNL1-202ENST00000557813 ARL4DP49703 201 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 ZNF252P-AS1Q0IIN9 211 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 RELL1Q8IUW5 271 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 DTWD1Q8N5C7 304 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 RHOVQ96L33 236 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 ACBD3Q9H3P7 528 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 ADAMTS1Q9UHI8 967 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.17□□□□□ -1.1
CGNL1-202ENST00000557813 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
CGNL1-202ENST00000557813 DLGAP3O95886 979 aa8.16□□□□□ -1.1
CGNL1-202ENST00000557813 GARTP22102 1010 aa8.16□□□□□ -1.1
CGNL1-202ENST00000557813 TNNI2P48788 182 aa8.16□□□□□ -1.1
CGNL1-202ENST00000557813 NLRP12P59046 1061 aa8.16□□□□□ -1.1
CGNL1-202ENST00000557813 SUZ12Q15022 739 aaKnown RBP8.16□□□□□ -1.1
CGNL1-202ENST00000557813 TGIF2Q9GZN2 237 aa8.16□□□□□ -1.1
CGNL1-202ENST00000557813 RIMBP3CA6NJZ7 1639 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 RIMBP3BA6NNM3 1639 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 RIMBP3Q9UFD9 1639 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 PF4P02776 101 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 MAOBP27338 520 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 COL8A1P27658 744 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 CD68P34810 354 aaPredicted RBP8.15□□□□□ -1.1
CGNL1-202ENST00000557813 RPS26P62854 115 aaKnown RBP8.15□□□□□ -1.1
CGNL1-202ENST00000557813 INSM1Q01101 510 aaPredicted RBP8.15□□□□□ -1.1
CGNL1-202ENST00000557813 PTPN11Q06124 597 aaPredicted RBP8.15□□□□□ -1.1
CGNL1-202ENST00000557813 AP3B2Q13367 1082 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 POU4F3Q15319 338 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 MAP4K3Q8IVH8 894 aa8.15□□□□□ -1.1
CGNL1-202ENST00000557813 ZC3H12CQ9C0D7 883 aaKnown RBP8.15□□□□□ -1.1
CGNL1-202ENST00000557813 WISP1O95388 367 aa8.14□□□□□ -1.11
CGNL1-202ENST00000557813 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
CGNL1-202ENST00000557813 RLBP1P12271 317 aa8.14□□□□□ -1.11
CGNL1-202ENST00000557813 TRIM28Q13263 835 aaKnown RBP8.14□□□□□ -1.11
CGNL1-202ENST00000557813 CAMK2GQ13555 558 aaPredicted RBP8.14□□□□□ -1.11
CGNL1-202ENST00000557813 PWP1Q13610 501 aa8.14□□□□□ -1.11
CGNL1-202ENST00000557813 FBXL19Q6PCT2 694 aa8.14□□□□□ -1.11
CGNL1-202ENST00000557813 ZNF654Q8IZM8 581 aa8.14□□□□□ -1.11
CGNL1-202ENST00000557813 BEND7Q8N7W2 519 aaPredicted RBP8.14□□□□□ -1.11
CGNL1-202ENST00000557813 DDX54Q8TDD1 881 aaKnown RBP8.14□□□□□ -1.11
CGNL1-202ENST00000557813 CBX8Q9HC52 389 aa8.14□□□□□ -1.11
CGNL1-202ENST00000557813 CACNA2D2Q9NY47 1150 aa8.14□□□□□ -1.11
CGNL1-202ENST00000557813 LOC100289279A0A1B0GTE1 492 aa8.13□□□□□ -1.11
CGNL1-202ENST00000557813 CYP11A1P05108 521 aa8.13□□□□□ -1.11
CGNL1-202ENST00000557813 EIF4A3P38919 411 aaKnown RBP8.13□□□□□ -1.11
CGNL1-202ENST00000557813 LMNB2Q03252 620 aa8.13□□□□□ -1.11
CGNL1-202ENST00000557813 FAM160A1Q05DH4 1040 aa8.13□□□□□ -1.11
CGNL1-202ENST00000557813 GRIK4Q16099 956 aa8.13□□□□□ -1.11
CGNL1-202ENST00000557813 UBASH3BQ8TF42 649 aa8.13□□□□□ -1.11
CGNL1-202ENST00000557813 WDR89Q96FK6 387 aaPredicted RBP8.13□□□□□ -1.11
CGNL1-202ENST00000557813 USP26Q9BXU7 913 aa8.13□□□□□ -1.11
CGNL1-202ENST00000557813 EMILIN2Q9BXX0 1053 aa8.13□□□□□ -1.11
CGNL1-202ENST00000557813 CCDC86Q9H6F5 360 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms