RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
TGFB3-207ENST00000557493 ZNF804BA4D1E1 1349 aa12.81□□□□□ -0.36
TGFB3-207ENST00000557493 DOCK2Q92608 1830 aa12.81□□□□□ -0.36
TGFB3-207ENST00000557493 CACNA1SQ13698 1873 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 SEMA3EO15041 775 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 ZBTB22O15209 634 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 SGSM2O43147 1006 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 ATP2B4P23634 1241 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 MCAMP43121 646 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 RBM25P49756 843 aaKnown RBP12.8□□□□□ -0.36
TGFB3-207ENST00000557493 NOGQ13253 232 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 VPS37DQ86XT2 251 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 TMX4Q9H1E5 349 aaPredicted RBP12.8□□□□□ -0.36
TGFB3-207ENST00000557493 ADARB2Q9NS39 739 aaKnown RBP12.8□□□□□ -0.36
TGFB3-207ENST00000557493 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
TGFB3-207ENST00000557493 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
TGFB3-207ENST00000557493 MCCP23508 829 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 ZAP70P43403 619 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 SCARF1Q14162 830 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 ZSCAN25Q6NSZ9 544 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
TGFB3-207ENST00000557493 SP8Q8IXZ3 490 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 SPATA5Q8NB90 893 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
TGFB3-207ENST00000557493 DDRGK1Q96HY6 314 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.79□□□□□ -0.36
TGFB3-207ENST00000557493 PODXL2Q9NZ53 605 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 ATP6V0A2Q9Y487 856 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 CASP8AP2Q9UKL3 1982 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
TGFB3-207ENST00000557493 MED23Q9ULK4 1368 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
TGFB3-207ENST00000557493 SNAP23O00161 211 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 BCAMP50895 628 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 GPSM2P81274 684 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 NMIQ13287 307 aaPredicted RBP12.78□□□□□ -0.36
TGFB3-207ENST00000557493 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 KIAA1211Q6ZU35 1233 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 C15orf52Q6ZUT6 534 aaKnown RBP12.78□□□□□ -0.36
TGFB3-207ENST00000557493 GLIS2Q9BZE0 524 aaPredicted RBP12.78□□□□□ -0.36
TGFB3-207ENST00000557493 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 ANO2Q9NQ90 1003 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 GGA1Q9UJY5 639 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
TGFB3-207ENST00000557493 UFL1O94874 794 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 GYG1P46976 350 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 ZNF804AQ7Z570 1209 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 NIM1KQ8IY84 436 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 USP26Q9BXU7 913 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 GPRC5DQ9NZD1 345 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 DENND2AQ9ULE3 1009 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 COL4A5P29400 1685 aa12.77□□□□□ -0.37
TGFB3-207ENST00000557493 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
TGFB3-207ENST00000557493 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
TGFB3-207ENST00000557493 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
TGFB3-207ENST00000557493 HIBADHP31937 336 aaKnown RBP12.76□□□□□ -0.37
TGFB3-207ENST00000557493 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
TGFB3-207ENST00000557493 FBXO33Q7Z6M2 555 aa12.76□□□□□ -0.37
TGFB3-207ENST00000557493 FAM84BQ96KN1 310 aaPredicted RBP12.76□□□□□ -0.37
TGFB3-207ENST00000557493 FAM227BQ96M60 508 aa12.76□□□□□ -0.37
TGFB3-207ENST00000557493 ANTXR1Q9H6X2 564 aa12.76□□□□□ -0.37
TGFB3-207ENST00000557493 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
TGFB3-207ENST00000557493 NSFL1CQ9UNZ2 370 aaKnown RBP12.76□□□□□ -0.37
TGFB3-207ENST00000557493 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
TGFB3-207ENST00000557493 IGSF3O75054 1194 aa12.75□□□□□ -0.37
TGFB3-207ENST00000557493 COL1A1P02452 1464 aaPredicted RBP12.75□□□□□ -0.37
TGFB3-207ENST00000557493 CYP2E1P05181 493 aaPredicted RBP12.75□□□□□ -0.37
TGFB3-207ENST00000557493 HUNKP57058 714 aa12.75□□□□□ -0.37
TGFB3-207ENST00000557493 MAP3K12Q12852 859 aa12.75□□□□□ -0.37
TGFB3-207ENST00000557493 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
TGFB3-207ENST00000557493 MCMDC2Q4G0Z9 681 aa12.75□□□□□ -0.37
TGFB3-207ENST00000557493 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
TGFB3-207ENST00000557493 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
TGFB3-207ENST00000557493 ZC3H15Q8WU90 426 aaKnown RBP12.75□□□□□ -0.37
TGFB3-207ENST00000557493 ZIC5Q96T25 663 aa12.75□□□□□ -0.37
TGFB3-207ENST00000557493 FRAT2O75474 233 aaPredicted RBP12.74□□□□□ -0.37
TGFB3-207ENST00000557493 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
TGFB3-207ENST00000557493 KLRK1P26718 216 aa12.74□□□□□ -0.37
TGFB3-207ENST00000557493 DPP8Q6V1X1 898 aaPredicted RBP12.74□□□□□ -0.37
TGFB3-207ENST00000557493 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
TGFB3-207ENST00000557493 MPNDQ8N594 471 aa12.74□□□□□ -0.37
TGFB3-207ENST00000557493 TBC1D16Q8TBP0 767 aa12.74□□□□□ -0.37
TGFB3-207ENST00000557493 APPBP2Q92624 585 aa12.74□□□□□ -0.37
TGFB3-207ENST00000557493 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
TGFB3-207ENST00000557493 IL25Q9H293 177 aa12.74□□□□□ -0.37
TGFB3-207ENST00000557493 PIH1D3Q9NQM4 214 aaKnown RBP12.74□□□□□ -0.37
TGFB3-207ENST00000557493 PGAP2Q9UHJ9 254 aa12.74□□□□□ -0.37
TGFB3-207ENST00000557493 C6orf229H3BNL8 230 aa12.73□□□□□ -0.37
TGFB3-207ENST00000557493 PPIP5K2O43314 1243 aa12.73□□□□□ -0.37
TGFB3-207ENST00000557493 ADD2P35612 726 aa12.73□□□□□ -0.37
TGFB3-207ENST00000557493 ANAPC15P60006 121 aa12.73□□□□□ -0.37
TGFB3-207ENST00000557493 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
TGFB3-207ENST00000557493 TMED8Q6PL24 325 aaPredicted RBP12.73□□□□□ -0.37
TGFB3-207ENST00000557493 CTU1Q7Z7A3 348 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms