RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CYP2E1P05181 493 aaPredicted RBP18.14■□□□□ 0.49
VIPAS39-210ENST00000557466 LDHBP07195 334 aaKnown RBP18.14■□□□□ 0.49
VIPAS39-210ENST00000557466 CFAP100Q494V2 611 aa18.14■□□□□ 0.49
VIPAS39-210ENST00000557466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.14■□□□□ 0.49
VIPAS39-210ENST00000557466 ZBED3Q96IU2 234 aaPredicted RBP18.14■□□□□ 0.49
VIPAS39-210ENST00000557466 ZBTB47Q9UFB7 747 aaPredicted RBP18.14■□□□□ 0.49
VIPAS39-210ENST00000557466 CLEC11AQ9Y240 323 aa18.14■□□□□ 0.49
VIPAS39-210ENST00000557466 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.49
VIPAS39-210ENST00000557466 WNT10BO00744 389 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 ATP5JP18859 108 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 CRKP46108 304 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 NBPF9Q3BBW0 867 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 TSHZ3Q63HK5 1081 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 CHADLQ6NUI6 762 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 MTMR14Q8NCE2 650 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 SMC1BQ8NDV3 1235 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 LNPKQ9C0E8 428 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 PIH1D3Q9NQM4 214 aaKnown RBP18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 ECHDC1Q9NTX5 307 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 SERPINA10Q9UK55 444 aa18.13■□□□□ 0.49
VIPAS39-210ENST00000557466 RBM5P52756 815 aaKnown RBP eCLIP18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 HDLBPQ00341 1268 aaKnown RBP18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 NUCB1Q02818 461 aa18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 DLGAP5Q15398 846 aa18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 DIXDC1Q155Q3 683 aa18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 MAP1SQ66K74 1059 aaPredicted RBP18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 ERICH6Q7L0X2 663 aa18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 CHD1LQ86WJ1 897 aa18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 GGA3Q9NZ52 723 aa18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 AOX1Q06278 1338 aa18.12■□□□□ 0.49
VIPAS39-210ENST00000557466 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 SPTY2D1Q68D10 685 aaPredicted RBP18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 DZIP1Q86YF9 867 aaKnown RBP18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 ZC3H15Q8WU90 426 aaKnown RBP18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 TEKT1Q969V4 418 aa18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 GPATCH3Q96I76 525 aa18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 DNAJC2Q99543 621 aaKnown RBP18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 BOLA2Q9H3K6 86 aa18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 PGAP2Q9UHJ9 254 aa18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 TRPM7Q96QT4 1865 aa18.11■□□□□ 0.49
VIPAS39-210ENST00000557466 TTC41PQ6P2S7 1318 aa18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 MX1P20591 662 aa18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 MECOMQ03112 1051 aa18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 ANGEL2Q5VTE6 544 aaKnown RBP18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 ZNF384Q8TF68 577 aa18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 EDC3Q96F86 508 aaKnown RBP18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 PRMT6Q96LA8 375 aaPredicted RBP18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 RAI14Q9P0K7 980 aa18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 LRP2BPQ9P2M1 347 aa18.1■□□□□ 0.49
VIPAS39-210ENST00000557466 GOLIM4O00461 696 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 FSTL1Q12841 308 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 HHIPL2Q6UWX4 724 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 PI4K2BQ8TCG2 481 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 NSUN4Q96CB9 384 aaKnown RBP18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 ZDHHC15Q96MV8 337 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 HAUS7Q99871 368 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 MRIQ9BWK5 157 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 DAGLAQ9Y4D2 1042 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 CDK5RAP2Q96SN8 1893 aa18.09■□□□□ 0.49
VIPAS39-210ENST00000557466 GAKO14976 1311 aa18.08■□□□□ 0.49
VIPAS39-210ENST00000557466 PITPNM2Q9BZ72 1349 aa18.08■□□□□ 0.49
VIPAS39-210ENST00000557466 CLRN2A0PK11 232 aa18.08■□□□□ 0.48
VIPAS39-210ENST00000557466 CNTROBQ8N137 903 aa18.08■□□□□ 0.48
VIPAS39-210ENST00000557466 GLIS2Q9BZE0 524 aaPredicted RBP18.08■□□□□ 0.48
VIPAS39-210ENST00000557466 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
VIPAS39-210ENST00000557466 MROH7-TTC4A0A0A0MT08 1334 aa18.07■□□□□ 0.48
VIPAS39-210ENST00000557466 IDH1O75874 414 aaKnown RBP18.07■□□□□ 0.48
VIPAS39-210ENST00000557466 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
VIPAS39-210ENST00000557466 DCPSQ96C86 337 aaKnown RBP18.07■□□□□ 0.48
VIPAS39-210ENST00000557466 TDRD3Q9H7E2 651 aaKnown RBP18.07■□□□□ 0.48
VIPAS39-210ENST00000557466 AK9Q5TCS8 1911 aa18.07■□□□□ 0.48
VIPAS39-210ENST00000557466 ADM5C9JUS6 153 aa18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 ITGBL1O95965 494 aaPredicted RBP18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 PDE1AP54750 535 aa18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 C1QTNF8P60827 252 aa18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 TTF1Q15361 905 aaPredicted RBP18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 SPDYE2Q495Y8 402 aa18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 STAP2Q9UGK3 403 aa18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 SCAF8Q9UPN6 1271 aaKnown RBP18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 FOCADQ5VW36 1801 aa18.06■□□□□ 0.48
VIPAS39-210ENST00000557466 PASKQ96RG2 1323 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 TRAF5O00463 557 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 ERC2O15083 957 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 MYO1BO43795 1136 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 GLRX3O76003 335 aaKnown RBP18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 PDE4AP27815 886 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 GSTO1P78417 241 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 FMR1Q06787 632 aaKnown RBP eCLIP18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 NAA16Q6N069 864 aaPredicted RBP18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 DLK2Q6UY11 383 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 KRT26Q7Z3Y9 468 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 USP48Q86UV5 1035 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 SLF2Q8IX21 1173 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 CCDC136Q96JN2 1154 aa18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 ZNF70Q9UC06 446 aaPredicted RBP18.05■□□□□ 0.48
VIPAS39-210ENST00000557466 MAP3K12Q12852 859 aa18.04■□□□□ 0.48
VIPAS39-210ENST00000557466 CDC37L1Q7L3B6 337 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms