RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 DONSONQ9NYP3 566 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 VPS18Q9P253 973 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 MYH15Q9Y2K3 1946 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 TMEM94Q12767 1356 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 FAM208AQ9UK61 1670 aaKnown RBP12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 SLC27A2O14975 620 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 ZSCAN12O43309 604 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 SART3Q15020 963 aaKnown RBP12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 BEND6Q5SZJ8 279 aaPredicted RBP12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 ATL3Q6DD88 541 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 LRRC31Q6UY01 552 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 BRF1Q92994 677 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 KDM4CQ9H3R0 1056 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 CXorf56Q9H5V9 222 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 RAB21Q9UL25 225 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 SH3BP5O60239 455 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 SURF6O75683 361 aaKnown RBP12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 NCAPHQ15003 741 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 WDR78Q5VTH9 848 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 BLOC1S2Q6QNY1 142 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 KIFC2Q96AC6 838 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 DCCP43146 1447 aa12.04□□□□□ -0.48
SUPT16H-207ENST00000557394 GOLGA6L9A6NEM1 432 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 C1QTNF12Q5T7M4 302 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 HDXQ7Z353 690 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 FMR1NBQ8N0W7 255 aaPredicted RBP12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 RETREG2Q8NC44 543 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 AKAP2Q9Y2D5 859 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 ABCC6O95255 1503 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 UBTFL1P0CB47 393 aaPredicted RBP12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 PPP1R42Q7Z4L9 355 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 TADA2BQ86TJ2 420 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 TMEM139Q8IV31 216 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 WDR24Q96S15 920 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 STK31Q9BXU1 1019 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 C19orf44Q9H6X5 657 aa12.03□□□□□ -0.48
SUPT16H-207ENST00000557394 A0A087WUV0 522 aaPredicted RBP12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 JAK2O60674 1132 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 EIF3JO75822 258 aaKnown RBP12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 NEXNQ0ZGT2 675 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 DPCR1Q3MIW9 517 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 CCDC30Q5VVM6 783 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 PAIP2Q9BPZ3 127 aaKnown RBP12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 L1RE1Q9UN81 338 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 PPP2R2CQ9Y2T4 447 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 JCADQ9P266 1359 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 NEDD4P46934 1319 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 ARHGAP6O43182 974 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 FANCCQ00597 558 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 NAA16Q6N069 864 aaPredicted RBP12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 RPAINQ86UA6 219 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 FSIP1Q8NA03 581 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 MSANTD4Q8NCY6 345 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 FAM71BQ8TC56 605 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 FAN1Q9Y2M0 1017 aa12.02□□□□□ -0.49
SUPT16H-207ENST00000557394 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 IKBKBO14920 756 aa12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 CCT2P78371 535 aaKnown RBP12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 ZRSR1Q15695 479 aaKnown RBP12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 PUS10Q3MIT2 529 aaKnown RBP12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 CLEC4GQ6UXB4 293 aa12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 NME9Q86XW9 330 aa12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 HELBQ8NG08 1087 aaPredicted RBP12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 SMARCC2Q8TAQ2 1214 aa12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 ANKZF1Q9H8Y5 726 aa12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 MED4Q9NPJ6 270 aa12.01□□□□□ -0.49
SUPT16H-207ENST00000557394 H3BQV1 296 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 CREB3O43889 395 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
SUPT16H-207ENST00000557394 E2F4Q16254 413 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 ZC3H12AQ5D1E8 599 aaKnown RBP12□□□□□ -0.49
SUPT16H-207ENST00000557394 IFFO2Q5TF58 517 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 VTI1AQ96AJ9 217 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 DDX11Q96FC9 970 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 TMX4Q9H1E5 349 aaPredicted RBP12□□□□□ -0.49
SUPT16H-207ENST00000557394 HSD3B7Q9H2F3 369 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 TSPYL4Q9UJ04 414 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 NUTM2FA1L443 756 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 N4BP1O75113 896 aaKnown RBP12□□□□□ -0.49
SUPT16H-207ENST00000557394 NLRP12P59046 1061 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 GNG11P61952 73 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 EIF4A2Q14240 407 aaKnown RBP12□□□□□ -0.49
SUPT16H-207ENST00000557394 RRS1Q15050 365 aaKnown RBP12□□□□□ -0.49
SUPT16H-207ENST00000557394 USP28Q96RU2 1077 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 FAM107BQ9H098 131 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 CACNA1FO60840 1977 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
SUPT16H-207ENST00000557394 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms