RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 CDKL5O76039 1030 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 TPM3P06753 285 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 ANTXR2P58335 489 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 SF3B3Q15393 1217 aaKnown RBP10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 RC3H1Q5TC82 1133 aaKnown RBP10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 GIMAP6Q6P9H5 292 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 TMED8Q6PL24 325 aaPredicted RBP10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 BRAPQ7Z569 592 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 FAM200AQ8TCP9 573 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 AIDAQ96BJ3 306 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 DDX11Q96FC9 970 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 PGBD1Q96JS3 809 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 TNMDQ9H2S6 317 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 CNNM2Q9H8M5 875 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 TFIP11Q9UBB9 837 aaKnown RBP10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 NIP7Q9Y221 180 aaKnown RBP eCLIP10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 PNPLA7Q6ZV29 1317 aa10.47□□□□□ -0.73
PPP4R3A-212ENST00000557382 KLF18A0A0U1RQI7 1052 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 IGSF3O75054 1194 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 IDH1O75874 414 aaKnown RBP10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 HCLS1P14317 486 aaPredicted RBP10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 FDPSP14324 419 aaKnown RBP10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 LIG1P18858 919 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 TERF1P54274 439 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 CCT2P78371 535 aaKnown RBP10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 UBE4AQ14139 1066 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 VPS72Q15906 364 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 FAM173BQ6P4H8 233 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 CPLX2Q6PUV4 134 aaKnown RBP10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 SGMS1Q86VZ5 419 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 ACSBG1Q96GR2 724 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 KRT23Q9C075 422 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 DACT1Q9NYF0 836 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 USP25Q9UHP3 1055 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 ANGEL1Q9UNK9 670 aaKnown RBP10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 HPS5Q9UPZ3 1129 aa10.46□□□□□ -0.73
PPP4R3A-212ENST00000557382 COL24A1Q17RW2 1714 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 BCL9LQ86UU0 1499 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 NID2Q14112 1375 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 A0A1W2PQ27 194 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 A0A1W2PQ64 194 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 A0A1W2PQD8 194 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 GOLGA8BA8MQT2 603 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 SH2B2O14492 632 aaPredicted RBP10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 CPLX1O14810 134 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 LIFRP42702 1097 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 RCAN1P53805 252 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 HAND2P61296 217 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 TYRO3Q06418 890 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 RASGRF1Q13972 1273 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 FBXO18Q8NFZ0 1043 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 C8orf76Q96K31 380 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 NACAP1Q9BZK3 213 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 NCOA5Q9HCD5 579 aaKnown RBP10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 ORC3Q9UBD5 711 aaPredicted RBP10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 WWC3Q9ULE0 1092 aa10.45□□□□□ -0.74
PPP4R3A-212ENST00000557382 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 PDS5AQ29RF7 1337 aaKnown RBP10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 SEMA3EO15041 775 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 OFD1O75665 1012 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 YEATS4O95619 227 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 ADCY5O95622 1261 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 PTMAP06454 111 aaKnown RBP10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 CHRNDQ07001 517 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 SASS6Q6UVJ0 657 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 CHST3Q7LGC8 479 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 ANKRD18AQ8IVF6 992 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 IFNL3Q8IZI9 196 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 TMTC2Q8N394 836 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 HELBQ8NG08 1087 aaPredicted RBP10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 NYXQ9GZU5 481 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 SEC31BQ9NQW1 1179 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 BSDC1Q9NW68 430 aaPredicted RBP10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 NAP1L2Q9ULW6 460 aaPredicted RBP10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 MRVI1Q9Y6F6 885 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
PPP4R3A-212ENST00000557382 STK36Q9NRP7 1315 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 DTNBO60941 627 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 APPP05067 770 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 AKNAD1Q5T1N1 836 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 ADALQ6DHV7 355 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 CCDC73Q6ZRK6 1079 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 TBC1D10CQ8IV04 446 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 MAGEB6Q8N7X4 407 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 KCNG4Q8TDN1 519 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 IGDCC4Q8TDY8 1250 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 STAG1Q8WVM7 1258 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 USP28Q96RU2 1077 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 NAPBQ9H115 298 aa10.43□□□□□ -0.74
PPP4R3A-212ENST00000557382 RNF41Q9H4P4 317 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms