RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
VPS33B-206ENST00000557358 COL1A1P02452 1464 aaPredicted RBP17■□□□□ 0.31
VPS33B-206ENST00000557358 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
VPS33B-206ENST00000557358 TNNI2P48788 182 aa17■□□□□ 0.31
VPS33B-206ENST00000557358 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
VPS33B-206ENST00000557358 SPTY2D1Q68D10 685 aaPredicted RBP17■□□□□ 0.31
VPS33B-206ENST00000557358 CEP85Q6P2H3 762 aa17■□□□□ 0.31
VPS33B-206ENST00000557358 ARMC9Q7Z3E5 817 aa17■□□□□ 0.31
VPS33B-206ENST00000557358 SLF2Q8IX21 1173 aa17■□□□□ 0.31
VPS33B-206ENST00000557358 ARAP2Q8WZ64 1704 aa17■□□□□ 0.31
VPS33B-206ENST00000557358 ZBED3Q96IU2 234 aaPredicted RBP17■□□□□ 0.31
VPS33B-206ENST00000557358 MRIQ9BWK5 157 aa17■□□□□ 0.31
VPS33B-206ENST00000557358 ECM29Q5VYK3 1845 aa16.99■□□□□ 0.31
VPS33B-206ENST00000557358 UQCRFS1P1P0C7P4 283 aa16.99■□□□□ 0.31
VPS33B-206ENST00000557358 PHKA1P46020 1223 aa16.99■□□□□ 0.31
VPS33B-206ENST00000557358 SUPT20HL1Q3ZLR7 823 aa16.99■□□□□ 0.31
VPS33B-206ENST00000557358 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
VPS33B-206ENST00000557358 CCDC102AQ96A19 550 aa16.99■□□□□ 0.31
VPS33B-206ENST00000557358 PRMT6Q96LA8 375 aaPredicted RBP16.99■□□□□ 0.31
VPS33B-206ENST00000557358 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
VPS33B-206ENST00000557358 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
VPS33B-206ENST00000557358 CLRN2A0PK11 232 aa16.98■□□□□ 0.31
VPS33B-206ENST00000557358 ZBTB22O15209 634 aa16.98■□□□□ 0.31
VPS33B-206ENST00000557358 ADORA1P30542 326 aa16.98■□□□□ 0.31
VPS33B-206ENST00000557358 MAP2K2P36507 400 aa16.98■□□□□ 0.31
VPS33B-206ENST00000557358 CYP4F22Q6NT55 531 aa16.98■□□□□ 0.31
VPS33B-206ENST00000557358 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
VPS33B-206ENST00000557358 PDS5AQ29RF7 1337 aaKnown RBP16.97■□□□□ 0.31
VPS33B-206ENST00000557358 SALL1Q9NSC2 1324 aa16.97■□□□□ 0.31
VPS33B-206ENST00000557358 PPP1R12BO60237 982 aaPredicted RBP16.97■□□□□ 0.31
VPS33B-206ENST00000557358 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
VPS33B-206ENST00000557358 HSPA1AP0DMV8 641 aaKnown RBP16.97■□□□□ 0.31
VPS33B-206ENST00000557358 HSPA1BP0DMV9 641 aaKnown RBP16.97■□□□□ 0.31
VPS33B-206ENST00000557358 ZNF157P51786 506 aaPredicted RBP16.97■□□□□ 0.31
VPS33B-206ENST00000557358 NOGQ13253 232 aa16.97■□□□□ 0.31
VPS33B-206ENST00000557358 RGMBQ6NW40 437 aa16.97■□□□□ 0.31
VPS33B-206ENST00000557358 HHIPL2Q6UWX4 724 aa16.97■□□□□ 0.31
VPS33B-206ENST00000557358 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
VPS33B-206ENST00000557358 ZBTB40Q9NUA8 1239 aa16.97■□□□□ 0.31
VPS33B-206ENST00000557358 ABCF2Q9UG63 623 aa16.97■□□□□ 0.31
VPS33B-206ENST00000557358 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
VPS33B-206ENST00000557358 TNNI3KQ59H18 835 aa16.96■□□□□ 0.31
VPS33B-206ENST00000557358 TTC39AQ5SRH9 613 aa16.96■□□□□ 0.31
VPS33B-206ENST00000557358 DLK2Q6UY11 383 aa16.96■□□□□ 0.31
VPS33B-206ENST00000557358 ZDHHC15Q96MV8 337 aa16.96■□□□□ 0.31
VPS33B-206ENST00000557358 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
VPS33B-206ENST00000557358 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
VPS33B-206ENST00000557358 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.31
VPS33B-206ENST00000557358 FPGT-TNNI3KV9GXZ4 949 aa16.96■□□□□ 0.31
VPS33B-206ENST00000557358 PAPPA2Q9BXP8 1791 aa16.95■□□□□ 0.3
VPS33B-206ENST00000557358 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
VPS33B-206ENST00000557358 HOOK2Q96ED9 719 aa16.95■□□□□ 0.3
VPS33B-206ENST00000557358 RASGRF1Q13972 1273 aa16.94■□□□□ 0.3
VPS33B-206ENST00000557358 RASA3Q14644 834 aa16.94■□□□□ 0.3
VPS33B-206ENST00000557358 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
VPS33B-206ENST00000557358 SPATA5Q8NB90 893 aa16.94■□□□□ 0.3
VPS33B-206ENST00000557358 TCP10L2B9ZVM9 353 aa16.93■□□□□ 0.3
VPS33B-206ENST00000557358 LDHCP07864 332 aa16.93■□□□□ 0.3
VPS33B-206ENST00000557358 IREB2P48200 963 aaKnown RBP16.93■□□□□ 0.3
VPS33B-206ENST00000557358 GSTO1P78417 241 aa16.93■□□□□ 0.3
VPS33B-206ENST00000557358 REM2Q8IYK8 340 aaPredicted RBP16.93■□□□□ 0.3
VPS33B-206ENST00000557358 CLASRPQ8N2M8 674 aaKnown RBP16.93■□□□□ 0.3
VPS33B-206ENST00000557358 KIF1BPQ96EK5 621 aa16.93■□□□□ 0.3
VPS33B-206ENST00000557358 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
VPS33B-206ENST00000557358 PCDHAC2Q9Y5I4 1007 aa16.93■□□□□ 0.3
VPS33B-206ENST00000557358 CA12O43570 354 aa16.92■□□□□ 0.3
VPS33B-206ENST00000557358 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
VPS33B-206ENST00000557358 ARID4AP29374 1257 aaPredicted RBP16.92■□□□□ 0.3
VPS33B-206ENST00000557358 PRDX5P30044 214 aa16.92■□□□□ 0.3
VPS33B-206ENST00000557358 FKBP1CQ5VVH2 108 aa16.92■□□□□ 0.3
VPS33B-206ENST00000557358 NOL10Q9BSC4 688 aaKnown RBP16.92■□□□□ 0.3
VPS33B-206ENST00000557358 LRP2BPQ9P2M1 347 aa16.92■□□□□ 0.3
VPS33B-206ENST00000557358 ANGEL1Q9UNK9 670 aaKnown RBP16.92■□□□□ 0.3
VPS33B-206ENST00000557358 UBE2Q2LH0YL09 131 aa16.91■□□□□ 0.3
VPS33B-206ENST00000557358 CTCFP49711 727 aaPredicted RBP16.91■□□□□ 0.3
VPS33B-206ENST00000557358 PRKG1Q13976 671 aa16.91■□□□□ 0.3
VPS33B-206ENST00000557358 GRIK5Q16478 980 aa16.91■□□□□ 0.3
VPS33B-206ENST00000557358 AACSQ86V21 672 aa16.91■□□□□ 0.3
VPS33B-206ENST00000557358 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
VPS33B-206ENST00000557358 RAI14Q9P0K7 980 aa16.91■□□□□ 0.3
VPS33B-206ENST00000557358 UNCXA6NJT0 531 aa16.9■□□□□ 0.3
VPS33B-206ENST00000557358 IGSF3O75054 1194 aa16.9■□□□□ 0.3
VPS33B-206ENST00000557358 AOC2O75106 756 aa16.9■□□□□ 0.3
VPS33B-206ENST00000557358 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
VPS33B-206ENST00000557358 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
VPS33B-206ENST00000557358 C20orf194Q5TEA3 1177 aa16.9■□□□□ 0.3
VPS33B-206ENST00000557358 FAM83AQ86UY5 434 aa16.9■□□□□ 0.3
VPS33B-206ENST00000557358 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
VPS33B-206ENST00000557358 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
VPS33B-206ENST00000557358 DAGLAQ9Y4D2 1042 aa16.9■□□□□ 0.3
VPS33B-206ENST00000557358 APBB1O00213 710 aa16.89■□□□□ 0.29
VPS33B-206ENST00000557358 SLC10A3P09131 477 aa16.89■□□□□ 0.29
VPS33B-206ENST00000557358 DIXDC1Q155Q3 683 aa16.89■□□□□ 0.29
VPS33B-206ENST00000557358 APOBEC3HQ6NTF7 200 aaKnown RBP16.89■□□□□ 0.29
VPS33B-206ENST00000557358 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.29
VPS33B-206ENST00000557358 SLC10A4Q96EP9 437 aa16.89■□□□□ 0.29
VPS33B-206ENST00000557358 ZNF512BQ96KM6 892 aaPredicted RBP16.89■□□□□ 0.29
VPS33B-206ENST00000557358 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.29
VPS33B-206ENST00000557358 USP40Q9NVE5 1235 aa16.89■□□□□ 0.29
VPS33B-206ENST00000557358 AK9Q5TCS8 1911 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms