RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 TLL2Q9Y6L7 1015 aa9.65□□□□□ -0.86
PSEN1-222ENST00000557356 UTRNP46939 3433 aa9.65□□□□□ -0.87
PSEN1-222ENST00000557356 UNCXA6NJT0 531 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 LDHCP07864 332 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 PHKA1P46020 1223 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 CRKP46108 304 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 TNNI3KQ59H18 835 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 FKBP1CQ5VVH2 108 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 TMED8Q6PL24 325 aaPredicted RBP9.64□□□□□ -0.87
PSEN1-222ENST00000557356 ARMC9Q7Z3E5 817 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 SAPCD2Q86UD0 394 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 CLASRPQ8N2M8 674 aaKnown RBP9.64□□□□□ -0.87
PSEN1-222ENST00000557356 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 KIF1BPQ96EK5 621 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 ZNF512BQ96KM6 892 aaPredicted RBP9.64□□□□□ -0.87
PSEN1-222ENST00000557356 PRMT6Q96LA8 375 aaPredicted RBP9.64□□□□□ -0.87
PSEN1-222ENST00000557356 ZDHHC15Q96MV8 337 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 FPGT-TNNI3KV9GXZ4 949 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 GOLGB1Q14789 3259 aaKnown RBP9.64□□□□□ -0.87
PSEN1-222ENST00000557356 SCN9AQ15858 1988 aa9.64□□□□□ -0.87
PSEN1-222ENST00000557356 CNTNAP1P78357 1384 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 PSME4Q14997 1843 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 PPP1R12BO60237 982 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-222ENST00000557356 MAP4K4O95819 1239 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-222ENST00000557356 MAP2K2P36507 400 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 GSTO1P78417 241 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 HTRA3P83110 453 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-222ENST00000557356 TTC39AQ5SRH9 613 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-222ENST00000557356 SPATA5Q8NB90 893 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 CDCA5Q96FF9 252 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 DEFB129Q9H1M3 183 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 MKRN1Q9UHC7 482 aaKnown RBP9.63□□□□□ -0.87
PSEN1-222ENST00000557356 JAG2Q9Y219 1238 aa9.63□□□□□ -0.87
PSEN1-222ENST00000557356 COL1A1P02452 1464 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-222ENST00000557356 ADM5C9JUS6 153 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-222ENST00000557356 ADORA1P30542 326 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 RRP1P56182 461 aaKnown RBP9.62□□□□□ -0.87
PSEN1-222ENST00000557356 HUNKP57058 714 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 RASGRF1Q13972 1273 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 SPDYE2Q495Y8 402 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 PAXIP1Q6ZW49 1069 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-222ENST00000557356 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 DZIP1Q86YF9 867 aaKnown RBP9.62□□□□□ -0.87
PSEN1-222ENST00000557356 RHPN1Q8TCX5 695 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 FAM163AQ96GL9 167 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-222ENST00000557356 BEGAINQ9BUH8 593 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 VEZTQ9HBM0 779 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 ZNF70Q9UC06 446 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-222ENST00000557356 ABCF2Q9UG63 623 aa9.62□□□□□ -0.87
PSEN1-222ENST00000557356 WDR33Q9C0J8 1336 aaKnown RBP9.61□□□□□ -0.87
PSEN1-222ENST00000557356 IFIT2P09913 472 aaKnown RBP9.61□□□□□ -0.87
PSEN1-222ENST00000557356 VEGFBP49765 207 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 NOGQ13253 232 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-222ENST00000557356 RGMBQ6NW40 437 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 FAM83AQ86UY5 434 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 CERS3Q8IU89 383 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 AIDAQ96BJ3 306 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 CAPNS2Q96L46 248 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 NOL10Q9BSC4 688 aaKnown RBP9.61□□□□□ -0.87
PSEN1-222ENST00000557356 TDRD3Q9H7E2 651 aaKnown RBP9.61□□□□□ -0.87
PSEN1-222ENST00000557356 LRP2BPQ9P2M1 347 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 ZBTB47Q9UFB7 747 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-222ENST00000557356 EXOC6BQ9Y2D4 811 aa9.61□□□□□ -0.87
PSEN1-222ENST00000557356 ASTN2O75129 1339 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-222ENST00000557356 CLRN2A0PK11 232 aa9.6□□□□□ -0.87
PSEN1-222ENST00000557356 ZNF157P51786 506 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-222ENST00000557356 FMR1Q06787 632 aaKnown RBP eCLIP9.6□□□□□ -0.87
PSEN1-222ENST00000557356 RASA3Q14644 834 aa9.6□□□□□ -0.87
PSEN1-222ENST00000557356 C20orf194Q5TEA3 1177 aa9.6□□□□□ -0.87
PSEN1-222ENST00000557356 APOBEC3HQ6NTF7 200 aaKnown RBP9.6□□□□□ -0.87
PSEN1-222ENST00000557356 AACSQ86V21 672 aa9.6□□□□□ -0.87
PSEN1-222ENST00000557356 EAF2Q96CJ1 260 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-222ENST00000557356 RNF39Q9H2S5 420 aa9.6□□□□□ -0.87
PSEN1-222ENST00000557356 HMG20BQ9P0W2 317 aa9.6□□□□□ -0.87
PSEN1-222ENST00000557356 A0A1B0GUL6 1792 aa9.6□□□□□ -0.87
PSEN1-222ENST00000557356 CA12O43570 354 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 BAG3O95817 575 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 PLCG2P16885 1265 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 PRDX5P30044 214 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 IREB2P48200 963 aaKnown RBP9.59□□□□□ -0.87
PSEN1-222ENST00000557356 CACNB1Q02641 598 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-222ENST00000557356 TTF1Q15361 905 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-222ENST00000557356 SIRT2Q8IXJ6 389 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 DBNDD2Q9BQY9 259 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 LRRCC1Q9C099 1032 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 CCDC8Q9H0W5 538 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-222ENST00000557356 USP40Q9NVE5 1235 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 RAI14Q9P0K7 980 aa9.59□□□□□ -0.87
PSEN1-222ENST00000557356 TCP10L2B9ZVM9 353 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 MCAMP43121 646 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 INHBEP58166 350 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 MECOMQ03112 1051 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 GRIK5Q16478 980 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 MAP3K11Q16584 847 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 DCAF15Q66K64 600 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 CYP4F22Q6NT55 531 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms