RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 CCL15-CCL14A0A0B4J2E2 113 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 HOXD10P28358 340 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 GJA5P36382 358 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 CCL15Q16663 113 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 LMBR1LQ6UX01 489 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.93□□□□□ -0.34
RDH11-210ENST00000557331 VPS37DQ86XT2 251 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 ERO1BQ86YB8 467 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 ELP3Q9H9T3 547 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
RDH11-210ENST00000557331 TMOD2Q9NZR1 351 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 SUGT1Q9Y2Z0 365 aa12.93□□□□□ -0.34
RDH11-210ENST00000557331 GRM8O00222 908 aa12.92□□□□□ -0.34
RDH11-210ENST00000557331 TLR2O60603 784 aa12.92□□□□□ -0.34
RDH11-210ENST00000557331 ALDH1L1O75891 902 aa12.92□□□□□ -0.34
RDH11-210ENST00000557331 SNAPC2Q13487 334 aa12.92□□□□□ -0.34
RDH11-210ENST00000557331 FAM83AQ86UY5 434 aa12.92□□□□□ -0.34
RDH11-210ENST00000557331 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
RDH11-210ENST00000557331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.92□□□□□ -0.34
RDH11-210ENST00000557331 BRI3BPQ8WY22 251 aa12.92□□□□□ -0.34
RDH11-210ENST00000557331 TEPSINQ96N21 525 aa12.92□□□□□ -0.34
RDH11-210ENST00000557331 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.92□□□□□ -0.34
RDH11-210ENST00000557331 MAST3O60307 1309 aa12.91□□□□□ -0.34
RDH11-210ENST00000557331 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
RDH11-210ENST00000557331 SPDYE5A6NIY4 337 aa12.91□□□□□ -0.34
RDH11-210ENST00000557331 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
RDH11-210ENST00000557331 VGLL4Q14135 290 aa12.91□□□□□ -0.34
RDH11-210ENST00000557331 CAVIN4Q5BKX8 364 aa12.91□□□□□ -0.34
RDH11-210ENST00000557331 BEND3Q5T5X7 828 aa12.91□□□□□ -0.34
RDH11-210ENST00000557331 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
RDH11-210ENST00000557331 TEKT1Q969V4 418 aa12.91□□□□□ -0.34
RDH11-210ENST00000557331 TDRD3Q9H7E2 651 aaKnown RBP12.91□□□□□ -0.34
RDH11-210ENST00000557331 PLIN1O60240 522 aa12.9□□□□□ -0.34
RDH11-210ENST00000557331 VAMP4O75379 141 aa12.9□□□□□ -0.34
RDH11-210ENST00000557331 FRAT2O75474 233 aaPredicted RBP12.9□□□□□ -0.34
RDH11-210ENST00000557331 CRKP46108 304 aa12.9□□□□□ -0.34
RDH11-210ENST00000557331 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
RDH11-210ENST00000557331 FAM84BQ96KN1 310 aaPredicted RBP12.9□□□□□ -0.34
RDH11-210ENST00000557331 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
RDH11-210ENST00000557331 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
RDH11-210ENST00000557331 SNAP23O00161 211 aa12.89□□□□□ -0.35
RDH11-210ENST00000557331 PPATQ06203 517 aa12.89□□□□□ -0.35
RDH11-210ENST00000557331 PPIL2Q13356 520 aa12.89□□□□□ -0.35
RDH11-210ENST00000557331 FBXO33Q7Z6M2 555 aa12.89□□□□□ -0.35
RDH11-210ENST00000557331 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
RDH11-210ENST00000557331 PCDHAC2Q9Y5I4 1007 aa12.89□□□□□ -0.35
RDH11-210ENST00000557331 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
RDH11-210ENST00000557331 HHIPL2Q6UWX4 724 aa12.88□□□□□ -0.35
RDH11-210ENST00000557331 FAM43AQ8N2R8 423 aa12.88□□□□□ -0.35
RDH11-210ENST00000557331 ZDHHC15Q96MV8 337 aa12.88□□□□□ -0.35
RDH11-210ENST00000557331 HTATIP2Q9BUP3 242 aa12.88□□□□□ -0.35
RDH11-210ENST00000557331 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
RDH11-210ENST00000557331 TMEM39BQ9GZU3 492 aa12.88□□□□□ -0.35
RDH11-210ENST00000557331 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
RDH11-210ENST00000557331 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
RDH11-210ENST00000557331 GYG1P46976 350 aa12.87□□□□□ -0.35
RDH11-210ENST00000557331 WRNIP1Q96S55 665 aa12.87□□□□□ -0.35
RDH11-210ENST00000557331 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
RDH11-210ENST00000557331 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
RDH11-210ENST00000557331 JAG2Q9Y219 1238 aa12.87□□□□□ -0.35
RDH11-210ENST00000557331 RIPOR2Q9Y4F9 1068 aa12.87□□□□□ -0.35
RDH11-210ENST00000557331 RPAP1Q9BWH6 1393 aaPredicted RBP12.86□□□□□ -0.35
RDH11-210ENST00000557331 BTBD19C9JJ37 291 aa12.86□□□□□ -0.35
RDH11-210ENST00000557331 IRF6O14896 467 aa12.86□□□□□ -0.35
RDH11-210ENST00000557331 ANKRD23Q86SG2 305 aa12.86□□□□□ -0.35
RDH11-210ENST00000557331 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
RDH11-210ENST00000557331 SRRDQ9UH36 339 aa12.86□□□□□ -0.35
RDH11-210ENST00000557331 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
RDH11-210ENST00000557331 SZT2Q5T011 3432 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 F6X3S4 739 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 H0YGN5 161 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 UBXN2AP68543 259 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 C17orf99Q6UX52 265 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 RAET1EQ8TD07 263 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 TRIM47Q96LD4 638 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 SNCAIPQ9Y6H5 919 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 AOX1Q06278 1338 aa12.85□□□□□ -0.35
RDH11-210ENST00000557331 PDE8BO95263 885 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 GJB1P08034 283 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 IFIT1P09914 478 aaKnown RBP12.84□□□□□ -0.35
RDH11-210ENST00000557331 PSMC4P43686 418 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 EXOSC9Q06265 439 aaKnown RBP12.84□□□□□ -0.35
RDH11-210ENST00000557331 METTL24Q5JXM2 366 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 EPHA10Q5JZY3 1008 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 WDR66Q8TBY9 1149 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 DPF3Q92784 378 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 PARK7Q99497 189 aaKnown RBP12.84□□□□□ -0.35
RDH11-210ENST00000557331 KCNH4Q9UQ05 1017 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 UTYO14607 1347 aa12.84□□□□□ -0.35
RDH11-210ENST00000557331 A0A1W2PPC1 479 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 CXCL11O14625 94 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
RDH11-210ENST00000557331 GRK4P32298 578 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 GJA8P48165 433 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 CAP1Q01518 475 aa12.83□□□□□ -0.36
RDH11-210ENST00000557331 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms