RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 LRRC23Q53EV4 343 aaPredicted RBP9.85□□□□□ -0.83
SYNE3-205ENST00000557275 GLT8D2Q9H1C3 349 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 TAF12Q16514 161 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 OPTNQ96CV9 577 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 SETD1BQ9UPS6 1966 aaKnown RBP9.85□□□□□ -0.83
SYNE3-205ENST00000557275 PCYT1AP49585 367 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 METTL24Q5JXM2 366 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 TTC4O95801 387 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 CHMP4BP1P59074 171 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 SLC12A2P55011 1212 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 PLCD3Q8N3E9 789 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 MRPS27Q92552 414 aaKnown RBP9.85□□□□□ -0.83
SYNE3-205ENST00000557275 JPH4Q96JJ6 628 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 NUP58Q9BVL2 599 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 KAT14Q9H8E8 782 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 IMPACTQ9P2X3 320 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 IFIT3O14879 490 aaKnown RBP9.85□□□□□ -0.83
SYNE3-205ENST00000557275 ABTB2Q8N961 1025 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 KLHDC4Q8TBB5 520 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 FAM71BQ8TC56 605 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 KCNG1Q9UIX4 513 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 MTHFSP49914 203 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 BANK1Q8NDB2 785 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 TYW1Q9NV66 732 aaKnown RBP9.85□□□□□ -0.83
SYNE3-205ENST00000557275 BRAPQ7Z569 592 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 ZNF277Q9NRM2 450 aaPredicted RBP9.85□□□□□ -0.83
SYNE3-205ENST00000557275 PPP2R5DQ14738 602 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 CCDC25Q86WR0 208 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 APOEP02649 317 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 RUNDC3BQ96NL0 473 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 SCHIP1Q9P0W5 487 aaPredicted RBP9.85□□□□□ -0.83
SYNE3-205ENST00000557275 KCNA4P22459 653 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 BMP2KLQ5H9B9 411 aa9.85□□□□□ -0.83
SYNE3-205ENST00000557275 ZSCAN23Q3MJ62 389 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 HHATQ5VTY9 493 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 RPAINQ86UA6 219 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 SSFA2P28290 1259 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 UBXN1Q04323 297 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 PPP2R3AQ06190 1150 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 IFT81Q8WYA0 676 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 TNPO1Q92973 898 aaKnown RBP9.84□□□□□ -0.83
SYNE3-205ENST00000557275 ZNF622Q969S3 477 aaKnown RBP eCLIP9.84□□□□□ -0.83
SYNE3-205ENST00000557275 PRKAR2BP31323 418 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 ANKIB1Q9P2G1 1089 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 RTL1A6NKG5 1358 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
SYNE3-205ENST00000557275 CABP5Q9NP86 173 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 AKNAQ7Z591 1439 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 TXNDC9O14530 226 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 LMNB1P20700 586 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 WDR44Q5JSH3 913 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 CNPY4Q8N129 248 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 RTL9Q8NET4 1388 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 RANBP6O60518 1105 aaKnown RBP9.84□□□□□ -0.83
SYNE3-205ENST00000557275 CCDC152Q4G0S7 254 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 PDZD8Q8NEN9 1154 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 ZFXP17010 805 aaPredicted RBP9.84□□□□□ -0.83
SYNE3-205ENST00000557275 FCHSD1Q86WN1 690 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 ZFP91Q96JP5 570 aaPredicted RBP9.84□□□□□ -0.83
SYNE3-205ENST00000557275 MIS12Q9H081 205 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 ABCF2Q9UG63 623 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 AFG3L2Q9Y4W6 797 aa9.84□□□□□ -0.83
SYNE3-205ENST00000557275 NLRP6P59044 892 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 RBSNQ9H1K0 784 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 SERPINI2O75830 405 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 CDAN1Q8IWY9 1227 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 LRRC43Q8N309 656 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 SEPT2Q15019 361 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 CFAP221Q4G0U5 840 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 NAPGQ99747 312 aaPredicted RBP9.83□□□□□ -0.84
SYNE3-205ENST00000557275 ZSWIM4Q9H7M6 989 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 CCDC141Q6ZP82 1450 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 KRT8P05787 483 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 SMTNP53814 917 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 CYP26C1Q6V0L0 522 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 MPNDQ8N594 471 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 GNA11P29992 359 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 TOP2AP11388 1531 aaKnown RBP9.83□□□□□ -0.84
SYNE3-205ENST00000557275 NPHP3Q7Z494 1330 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 TAF11Q15544 211 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 RRAGBQ5VZM2 374 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 IPO11Q9UI26 975 aaKnown RBP9.83□□□□□ -0.84
SYNE3-205ENST00000557275 PAXIP1Q6ZW49 1069 aaPredicted RBP9.83□□□□□ -0.84
SYNE3-205ENST00000557275 FBXO41Q8TF61 875 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 HPDP32754 393 aaPredicted RBP9.83□□□□□ -0.84
SYNE3-205ENST00000557275 APBA1Q02410 837 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 BTBD11A6QL63 1104 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 FLOT1O75955 427 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 TEKT1Q969V4 418 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 RASIP1Q5U651 963 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.83□□□□□ -0.84
SYNE3-205ENST00000557275 ZKSCAN8Q15776 578 aaPredicted RBP9.83□□□□□ -0.84
SYNE3-205ENST00000557275 TEX12Q9BXU0 123 aa9.83□□□□□ -0.84
SYNE3-205ENST00000557275 PPANQ9NQ55 473 aaKnown RBP9.83□□□□□ -0.84
SYNE3-205ENST00000557275 MINDY4BA8MYZ0 360 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 TTC19Q6DKK2 380 aaPredicted RBP9.82□□□□□ -0.84
SYNE3-205ENST00000557275 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 GRK7Q8WTQ7 553 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 CACTINQ8WUQ7 758 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms