RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 DBNDD1Q9H9R9 158 aa28.52■■■□□ 2.16
SIX4-203ENST00000556952 DOK7Q18PE1 504 aa28.51■■■□□ 2.15
SIX4-203ENST00000556952 TMED8Q6PL24 325 aaPredicted RBP28.51■■■□□ 2.15
SIX4-203ENST00000556952 ZNF589Q86UQ0 364 aaPredicted RBP28.51■■■□□ 2.15
SIX4-203ENST00000556952 MAST3O60307 1309 aa28.51■■■□□ 2.15
SIX4-203ENST00000556952 GLTPD2A6NH11 291 aa28.5■■■□□ 2.15
SIX4-203ENST00000556952 ABCF2Q9UG63 623 aa28.5■■■□□ 2.15
SIX4-203ENST00000556952 PSME4Q14997 1843 aa28.5■■■□□ 2.15
SIX4-203ENST00000556952 TCRBV5S4A2TA0A5A2 114 aa28.5■■■□□ 2.15
SIX4-203ENST00000556952 YDJCA8MPS7 323 aa28.5■■■□□ 2.15
SIX4-203ENST00000556952 DDNO94850 711 aaPredicted RBP28.5■■■□□ 2.15
SIX4-203ENST00000556952 CHAF1AQ13111 956 aaPredicted RBP28.5■■■□□ 2.15
SIX4-203ENST00000556952 SEC62Q99442 399 aaKnown RBP28.5■■■□□ 2.15
SIX4-203ENST00000556952 ZNRF3Q9ULT6 936 aa28.5■■■□□ 2.15
SIX4-203ENST00000556952 ZNF532Q9HCE3 1301 aa28.49■■■□□ 2.15
SIX4-203ENST00000556952 WDR90Q96KV7 1748 aa28.49■■■□□ 2.15
SIX4-203ENST00000556952 MAGEB6Q8N7X4 407 aa28.49■■■□□ 2.15
SIX4-203ENST00000556952 OSBP2Q969R2 916 aa28.49■■■□□ 2.15
SIX4-203ENST00000556952 ECE2O60344 883 aa28.48■■■□□ 2.15
SIX4-203ENST00000556952 SLFNL1Q499Z3 407 aa28.48■■■□□ 2.15
SIX4-203ENST00000556952 SPTY2D1Q68D10 685 aaPredicted RBP28.48■■■□□ 2.15
SIX4-203ENST00000556952 ZNF646O15015 1829 aaPredicted RBP28.48■■■□□ 2.15
SIX4-203ENST00000556952 EIF6P56537 245 aaKnown RBP28.47■■■□□ 2.15
SIX4-203ENST00000556952 ERICH6Q7L0X2 663 aa28.47■■■□□ 2.15
SIX4-203ENST00000556952 GPBP1L1Q9HC44 474 aaPredicted RBP28.47■■■□□ 2.15
SIX4-203ENST00000556952 NMRK2Q9NPI5 230 aa28.47■■■□□ 2.15
SIX4-203ENST00000556952 RAI14Q9P0K7 980 aa28.47■■■□□ 2.15
SIX4-203ENST00000556952 FAM205AQ6ZU69 1335 aa28.46■■■□□ 2.15
SIX4-203ENST00000556952 M0R2C6 588 aa28.46■■■□□ 2.15
SIX4-203ENST00000556952 DPY19L2Q6NUT2 758 aa28.46■■■□□ 2.15
SIX4-203ENST00000556952 MAP4K1Q92918 833 aa28.46■■■□□ 2.15
SIX4-203ENST00000556952 PTH1RQ03431 593 aa28.45■■■□□ 2.15
SIX4-203ENST00000556952 CXCL9Q07325 125 aa28.45■■■□□ 2.15
SIX4-203ENST00000556952 CCDC129Q6ZRS4 1044 aa28.45■■■□□ 2.15
SIX4-203ENST00000556952 TBC1D22AQ8WUA7 517 aa28.45■■■□□ 2.15
SIX4-203ENST00000556952 KCNQ5Q9NR82 932 aa28.45■■■□□ 2.15
SIX4-203ENST00000556952 G3V3G9 751 aa28.45■■■□□ 2.14
SIX4-203ENST00000556952 RAD17O75943 681 aa28.45■■■□□ 2.14
SIX4-203ENST00000556952 HSPA4P34932 840 aa28.45■■■□□ 2.14
SIX4-203ENST00000556952 ANAPC15P60006 121 aa28.45■■■□□ 2.14
SIX4-203ENST00000556952 DCAF8Q5TAQ9 597 aa28.45■■■□□ 2.14
SIX4-203ENST00000556952 PUS7LQ9H0K6 701 aaKnown RBP28.45■■■□□ 2.14
SIX4-203ENST00000556952 PODNQ7Z5L7 613 aa28.44■■■□□ 2.14
SIX4-203ENST00000556952 DSCC1Q9BVC3 393 aa28.44■■■□□ 2.14
SIX4-203ENST00000556952 GJA3Q9Y6H8 435 aa28.44■■■□□ 2.14
SIX4-203ENST00000556952 GPAA1O43292 621 aa28.42■■■□□ 2.14
SIX4-203ENST00000556952 GPC2Q8N158 579 aa28.42■■■□□ 2.14
SIX4-203ENST00000556952 NSUN4Q96CB9 384 aaKnown RBP28.42■■■□□ 2.14
SIX4-203ENST00000556952 IL17RAQ96F46 866 aa28.42■■■□□ 2.14
SIX4-203ENST00000556952 PRDX5P30044 214 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 NAA16Q6N069 864 aaPredicted RBP28.41■■■□□ 2.14
SIX4-203ENST00000556952 DDRGK1Q96HY6 314 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 KIF2CQ99661 725 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 RRAGCQ9HB90 399 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 JAG2Q9Y219 1238 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 RBM8AQ9Y5S9 174 aaKnown RBP28.41■■■□□ 2.14
SIX4-203ENST00000556952 SCN4AP35499 1836 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 POTECB2RU33 542 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 LDHBP07195 334 aaKnown RBP28.41■■■□□ 2.14
SIX4-203ENST00000556952 CYP7A1P22680 504 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 CIAPIN1Q6FI81 312 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 AIDAQ96BJ3 306 aa28.41■■■□□ 2.14
SIX4-203ENST00000556952 U3KPZ7 1027 aaPredicted RBP28.41■■■□□ 2.14
SIX4-203ENST00000556952 MECOMQ03112 1051 aa28.4■■■□□ 2.14
SIX4-203ENST00000556952 DZIP1Q86YF9 867 aaKnown RBP28.4■■■□□ 2.14
SIX4-203ENST00000556952 HSPD1P10809 573 aaKnown RBP28.39■■■□□ 2.14
SIX4-203ENST00000556952 NECTIN1Q15223 517 aa28.39■■■□□ 2.14
SIX4-203ENST00000556952 SUGT1Q9Y2Z0 365 aa28.39■■■□□ 2.14
SIX4-203ENST00000556952 PSMD14O00487 310 aa28.38■■■□□ 2.13
SIX4-203ENST00000556952 GTF2IP78347 998 aa28.38■■■□□ 2.13
SIX4-203ENST00000556952 MFSD14BQ5SR56 506 aa28.38■■■□□ 2.13
SIX4-203ENST00000556952 RNF20Q5VTR2 975 aa28.38■■■□□ 2.13
SIX4-203ENST00000556952 L3MBTL3Q96JM7 780 aaPredicted RBP28.38■■■□□ 2.13
SIX4-203ENST00000556952 MYH2Q9UKX2 1941 aa28.38■■■□□ 2.13
SIX4-203ENST00000556952 KIF3CO14782 793 aa28.37■■■□□ 2.13
SIX4-203ENST00000556952 GSTO1P78417 241 aa28.37■■■□□ 2.13
SIX4-203ENST00000556952 ZNF384Q8TF68 577 aa28.37■■■□□ 2.13
SIX4-203ENST00000556952 KCNB2Q92953 911 aa28.37■■■□□ 2.13
SIX4-203ENST00000556952 MBD4O95243 580 aa28.37■■■□□ 2.13
SIX4-203ENST00000556952 RABEP1Q15276 862 aa28.37■■■□□ 2.13
SIX4-203ENST00000556952 VPS53Q5VIR6 699 aa28.37■■■□□ 2.13
SIX4-203ENST00000556952 PALD1Q9ULE6 856 aa28.37■■■□□ 2.13
SIX4-203ENST00000556952 GNAT2P19087 354 aa28.36■■■□□ 2.13
SIX4-203ENST00000556952 TNIP1Q15025 636 aa28.36■■■□□ 2.13
SIX4-203ENST00000556952 TTLL5Q6EMB2 1281 aa28.36■■■□□ 2.13
SIX4-203ENST00000556952 STRBPQ96SI9 672 aaKnown RBP28.36■■■□□ 2.13
SIX4-203ENST00000556952 LAMA4Q16363 1823 aa28.36■■■□□ 2.13
SIX4-203ENST00000556952 SCNN1DP51172 638 aa28.35■■■□□ 2.13
SIX4-203ENST00000556952 CREB3L3Q68CJ9 461 aa28.35■■■□□ 2.13
SIX4-203ENST00000556952 ADGRA1Q86SQ6 560 aa28.35■■■□□ 2.13
SIX4-203ENST00000556952 ZBTB12Q9Y330 459 aaPredicted RBP28.35■■■□□ 2.13
SIX4-203ENST00000556952 MAGEB6P1A0A0J9YX57 407 aa28.34■■■□□ 2.13
SIX4-203ENST00000556952 ZKSCAN1P17029 563 aaPredicted RBP28.34■■■□□ 2.13
SIX4-203ENST00000556952 FKBP1AP62942 108 aaKnown RBP28.34■■■□□ 2.13
SIX4-203ENST00000556952 SNX14Q9Y5W7 946 aa28.34■■■□□ 2.13
SIX4-203ENST00000556952 RPAP1Q9BWH6 1393 aaPredicted RBP28.34■■■□□ 2.13
SIX4-203ENST00000556952 SLC27A2O14975 620 aa28.33■■■□□ 2.13
SIX4-203ENST00000556952 GMPSP49915 693 aaPredicted RBP28.33■■■□□ 2.13
SIX4-203ENST00000556952 STRIP1Q5VSL9 837 aa28.33■■■□□ 2.13
SIX4-203ENST00000556952 IL27Q8NEV9 243 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms