RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PPP2R3BQ9Y5P8 575 aa16.19■□□□□ 0.18
PSEN1-219ENST00000556951 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
PSEN1-219ENST00000556951 CLRN2A0PK11 232 aa16.18■□□□□ 0.18
PSEN1-219ENST00000556951 NEURL1BA8MQ27 555 aa16.18■□□□□ 0.18
PSEN1-219ENST00000556951 APAF1O14727 1248 aa16.18■□□□□ 0.18
PSEN1-219ENST00000556951 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
PSEN1-219ENST00000556951 CSF1RP07333 972 aa16.18■□□□□ 0.18
PSEN1-219ENST00000556951 CASP7P55210 303 aa16.18■□□□□ 0.18
PSEN1-219ENST00000556951 SUPT20HL1Q3ZLR7 823 aa16.18■□□□□ 0.18
PSEN1-219ENST00000556951 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
PSEN1-219ENST00000556951 C15orf52Q6ZUT6 534 aaKnown RBP16.18■□□□□ 0.18
PSEN1-219ENST00000556951 PLA2G12BQ9BX93 195 aa16.18■□□□□ 0.18
PSEN1-219ENST00000556951 ANKRD2Q9GZV1 360 aa16.18■□□□□ 0.18
PSEN1-219ENST00000556951 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
PSEN1-219ENST00000556951 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
PSEN1-219ENST00000556951 ITGA6P23229 1130 aa16.17■□□□□ 0.18
PSEN1-219ENST00000556951 GNAI1P63096 354 aa16.17■□□□□ 0.18
PSEN1-219ENST00000556951 CHRNDQ07001 517 aa16.17■□□□□ 0.18
PSEN1-219ENST00000556951 CFAP100Q494V2 611 aa16.17■□□□□ 0.18
PSEN1-219ENST00000556951 PIEZO1Q92508 2521 aa16.17■□□□□ 0.18
PSEN1-219ENST00000556951 IGHMBP2P38935 993 aaKnown RBP16.16■□□□□ 0.18
PSEN1-219ENST00000556951 RASA3Q14644 834 aa16.16■□□□□ 0.18
PSEN1-219ENST00000556951 CCDC30Q5VVM6 783 aa16.16■□□□□ 0.18
PSEN1-219ENST00000556951 G2E3Q7L622 706 aa16.16■□□□□ 0.18
PSEN1-219ENST00000556951 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
PSEN1-219ENST00000556951 ANKRD13AQ8IZ07 590 aa16.16■□□□□ 0.18
PSEN1-219ENST00000556951 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
PSEN1-219ENST00000556951 BRI3BPQ8WY22 251 aa16.16■□□□□ 0.18
PSEN1-219ENST00000556951 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
PSEN1-219ENST00000556951 MYH3P11055 1940 aa16.15■□□□□ 0.18
PSEN1-219ENST00000556951 F8W031 263 aaPredicted RBP16.15■□□□□ 0.18
PSEN1-219ENST00000556951 IL1R1P14778 569 aa16.15■□□□□ 0.18
PSEN1-219ENST00000556951 IREB2P48200 963 aaKnown RBP16.15■□□□□ 0.18
PSEN1-219ENST00000556951 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.15■□□□□ 0.18
PSEN1-219ENST00000556951 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
PSEN1-219ENST00000556951 MAFAQ8NHW3 353 aaPredicted RBP16.15■□□□□ 0.18
PSEN1-219ENST00000556951 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
PSEN1-219ENST00000556951 TAF5LO75529 589 aa16.14■□□□□ 0.17
PSEN1-219ENST00000556951 CCL5P13501 91 aa16.14■□□□□ 0.17
PSEN1-219ENST00000556951 PRMT2P55345 433 aa16.14■□□□□ 0.17
PSEN1-219ENST00000556951 FKBP1AP62942 108 aaKnown RBP16.14■□□□□ 0.17
PSEN1-219ENST00000556951 CDAN1Q8IWY9 1227 aa16.14■□□□□ 0.17
PSEN1-219ENST00000556951 OPTNQ96CV9 577 aa16.14■□□□□ 0.17
PSEN1-219ENST00000556951 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
PSEN1-219ENST00000556951 ARIH1Q9Y4X5 557 aaPredicted RBP16.14■□□□□ 0.17
PSEN1-219ENST00000556951 GCKRQ14397 625 aa16.13■□□□□ 0.17
PSEN1-219ENST00000556951 FAM43AQ8N2R8 423 aa16.13■□□□□ 0.17
PSEN1-219ENST00000556951 FAM161BQ96MY7 647 aa16.13■□□□□ 0.17
PSEN1-219ENST00000556951 MPHOSPH8Q99549 860 aa16.13■□□□□ 0.17
PSEN1-219ENST00000556951 VEZTQ9HBM0 779 aa16.13■□□□□ 0.17
PSEN1-219ENST00000556951 ECM29Q5VYK3 1845 aa16.12■□□□□ 0.17
PSEN1-219ENST00000556951 GNRH1P01148 92 aa16.12■□□□□ 0.17
PSEN1-219ENST00000556951 U2AF1L4Q8WU68 220 aaKnown RBP16.12■□□□□ 0.17
PSEN1-219ENST00000556951 ARHGAP39Q9C0H5 1083 aa16.12■□□□□ 0.17
PSEN1-219ENST00000556951 RNF208Q9H0X6 261 aa16.12■□□□□ 0.17
PSEN1-219ENST00000556951 ZNF70Q9UC06 446 aaPredicted RBP16.12■□□□□ 0.17
PSEN1-219ENST00000556951 BDP1A6H8Y1 2624 aa16.11■□□□□ 0.17
PSEN1-219ENST00000556951 MYO1BO43795 1136 aa16.11■□□□□ 0.17
PSEN1-219ENST00000556951 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
PSEN1-219ENST00000556951 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
PSEN1-219ENST00000556951 CCDC27Q2M243 656 aa16.11■□□□□ 0.17
PSEN1-219ENST00000556951 TJAP1Q5JTD0 557 aa16.11■□□□□ 0.17
PSEN1-219ENST00000556951 JAG2Q9Y219 1238 aa16.11■□□□□ 0.17
PSEN1-219ENST00000556951 ZNF521Q96K83 1311 aa16.11■□□□□ 0.17
PSEN1-219ENST00000556951 CCL15-CCL14A0A0B4J2E2 113 aa16.1■□□□□ 0.17
PSEN1-219ENST00000556951 MAGEA10P43363 369 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-219ENST00000556951 KCNJ4P48050 445 aa16.1■□□□□ 0.17
PSEN1-219ENST00000556951 FOXO4P98177 505 aa16.1■□□□□ 0.17
PSEN1-219ENST00000556951 CCL15Q16663 113 aa16.1■□□□□ 0.17
PSEN1-219ENST00000556951 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
PSEN1-219ENST00000556951 TDRD3Q9H7E2 651 aaKnown RBP16.1■□□□□ 0.17
PSEN1-219ENST00000556951 ZFYVE28Q9HCC9 887 aa16.1■□□□□ 0.17
PSEN1-219ENST00000556951 ZMYND8Q9ULU4 1186 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-219ENST00000556951 OTOFQ9HC10 1997 aa16.09■□□□□ 0.17
PSEN1-219ENST00000556951 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
PSEN1-219ENST00000556951 KIF22Q14807 665 aa16.09■□□□□ 0.17
PSEN1-219ENST00000556951 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.09■□□□□ 0.17
PSEN1-219ENST00000556951 CDX2Q99626 313 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-219ENST00000556951 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
PSEN1-219ENST00000556951 FAM205AQ6ZU69 1335 aa16.09■□□□□ 0.17
PSEN1-219ENST00000556951 SGPL1O95470 568 aa16.08■□□□□ 0.16
PSEN1-219ENST00000556951 GRK4P32298 578 aa16.08■□□□□ 0.16
PSEN1-219ENST00000556951 GTF2A2P52657 109 aa16.08■□□□□ 0.16
PSEN1-219ENST00000556951 RBM5P52756 815 aaKnown RBP eCLIP16.08■□□□□ 0.16
PSEN1-219ENST00000556951 LACTBP83111 547 aaPredicted RBP16.08■□□□□ 0.16
PSEN1-219ENST00000556951 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
PSEN1-219ENST00000556951 VGLL4Q14135 290 aa16.08■□□□□ 0.16
PSEN1-219ENST00000556951 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.16
PSEN1-219ENST00000556951 UBE2OQ9C0C9 1292 aaKnown RBP16.08■□□□□ 0.16
PSEN1-219ENST00000556951 NCOR1O75376 2440 aa16.07■□□□□ 0.16
PSEN1-219ENST00000556951 ANKRD18BA2A2Z9 1011 aa16.07■□□□□ 0.16
PSEN1-219ENST00000556951 TLR2O60603 784 aa16.07■□□□□ 0.16
PSEN1-219ENST00000556951 ECM2O94769 699 aaPredicted RBP16.07■□□□□ 0.16
PSEN1-219ENST00000556951 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
PSEN1-219ENST00000556951 CTGFP29279 349 aa16.07■□□□□ 0.16
PSEN1-219ENST00000556951 WDR63Q8IWG1 891 aa16.07■□□□□ 0.16
PSEN1-219ENST00000556951 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
PSEN1-219ENST00000556951 C7orf61Q8IZ16 206 aa16.07■□□□□ 0.16
PSEN1-219ENST00000556951 TDRD7Q8NHU6 1098 aaKnown RBP16.07■□□□□ 0.16
PSEN1-219ENST00000556951 TMEM39BQ9GZU3 492 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms